RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 SPSB1Q96BD6 273 aa20.56■□□□□ 0.88
VEGFA-208ENST00000417285 SNX22Q96L94 193 aa20.56■□□□□ 0.88
VEGFA-208ENST00000417285 SLC29A1Q99808 456 aa20.56■□□□□ 0.88
VEGFA-208ENST00000417285 ALG8Q9BVK2 526 aa20.56■□□□□ 0.88
VEGFA-208ENST00000417285 RANBP3Q9H6Z4 567 aaPredicted RBP20.56■□□□□ 0.88
VEGFA-208ENST00000417285 IGKV1-9A0A0C4DH69 117 aa20.55■□□□□ 0.88
VEGFA-208ENST00000417285 LOC100130705A0A1B0GUX0 176 aa20.55■□□□□ 0.88
VEGFA-208ENST00000417285 VGLL3A8MV65 326 aa20.55■□□□□ 0.88
VEGFA-208ENST00000417285 FADS2O95864 444 aaKnown RBP20.55■□□□□ 0.88
VEGFA-208ENST00000417285 PIPP12273 146 aaPredicted RBP20.55■□□□□ 0.88
VEGFA-208ENST00000417285 POU3F4P49335 361 aa20.55■□□□□ 0.88
VEGFA-208ENST00000417285 ALKBH1Q13686 389 aaKnown RBP20.55■□□□□ 0.88
VEGFA-208ENST00000417285 C2orf68Q2NKX9 166 aa20.55■□□□□ 0.88
VEGFA-208ENST00000417285 CRIP3Q6Q6R5 217 aa20.55■□□□□ 0.88
VEGFA-208ENST00000417285 LHFPL3Q86UP9 236 aa20.55■□□□□ 0.88
VEGFA-208ENST00000417285 OR8H2Q8N162 312 aa20.55■□□□□ 0.88
VEGFA-208ENST00000417285 ZNF676Q8N7Q3 588 aa20.55■□□□□ 0.88
VEGFA-208ENST00000417285 OR13C3Q8NGS6 347 aa20.55■□□□□ 0.88
VEGFA-208ENST00000417285 MALSU1Q96EH3 234 aa20.55■□□□□ 0.88
VEGFA-208ENST00000417285 CDCA4Q9BXL8 241 aa20.55■□□□□ 0.88
VEGFA-208ENST00000417285 INPP5EQ9NRR6 644 aa20.55■□□□□ 0.88
VEGFA-208ENST00000417285 RPSAP08865 295 aaKnown RBP20.54■□□□□ 0.88
VEGFA-208ENST00000417285 EDDM3BP56851 147 aa20.54■□□□□ 0.88
VEGFA-208ENST00000417285 ZNF782Q6ZMW2 699 aaPredicted RBP20.54■□□□□ 0.88
VEGFA-208ENST00000417285 Q6ZTK2 550 aa20.54■□□□□ 0.88
VEGFA-208ENST00000417285 SYS1Q8N2H4 156 aa20.54■□□□□ 0.88
VEGFA-208ENST00000417285 PIFOQ8TCI5 191 aa20.54■□□□□ 0.88
VEGFA-208ENST00000417285 OPALINQ96PE5 141 aa20.54■□□□□ 0.88
VEGFA-208ENST00000417285 NPFFR1Q9GZQ6 430 aa20.54■□□□□ 0.88
VEGFA-208ENST00000417285 FAM118AQ9NWS6 357 aa20.54■□□□□ 0.88
VEGFA-208ENST00000417285 TBL2Q9Y4P3 447 aaKnown RBP20.54■□□□□ 0.88
VEGFA-208ENST00000417285 TRBV2A0A0J9YWF9 115 aa20.53■□□□□ 0.88
VEGFA-208ENST00000417285 hADV38S2A0JD32 116 aa20.53■□□□□ 0.88
VEGFA-208ENST00000417285 OR4C45A6NMZ5 311 aa20.53■□□□□ 0.88
VEGFA-208ENST00000417285 HAND1O96004 215 aa20.53■□□□□ 0.88
VEGFA-208ENST00000417285 IGHA1P01876 353 aa20.53■□□□□ 0.88
VEGFA-208ENST00000417285 BMXP51813 675 aa20.53■□□□□ 0.88
VEGFA-208ENST00000417285 RAB40BQ12829 278 aa20.53■□□□□ 0.88
VEGFA-208ENST00000417285 MRPL28Q13084 256 aaKnown RBP20.53■□□□□ 0.88
VEGFA-208ENST00000417285 HERPUD1Q15011 391 aa20.53■□□□□ 0.88
VEGFA-208ENST00000417285 FAM58AQ8N1B3 248 aa20.53■□□□□ 0.88
VEGFA-208ENST00000417285 OR11H6Q8NGC7 330 aa20.53■□□□□ 0.88
VEGFA-208ENST00000417285 OR2T6Q8NHC8 308 aa20.53■□□□□ 0.88
VEGFA-208ENST00000417285 FOXRED1Q96CU9 486 aaPredicted RBP20.53■□□□□ 0.88
VEGFA-208ENST00000417285 NEK6Q9HC98 313 aa20.53■□□□□ 0.88
VEGFA-208ENST00000417285 AMBNQ9NP70 447 aa20.53■□□□□ 0.88
VEGFA-208ENST00000417285 GLS2Q9UI32 602 aa20.53■□□□□ 0.88
VEGFA-208ENST00000417285 RPL36Q9Y3U8 105 aaKnown RBP20.53■□□□□ 0.88
VEGFA-208ENST00000417285 BAG2O95816 211 aa20.52■□□□□ 0.88
VEGFA-208ENST00000417285 PEX2P28328 305 aa20.52■□□□□ 0.88
VEGFA-208ENST00000417285 EFNB2P52799 333 aa20.52■□□□□ 0.88
VEGFA-208ENST00000417285 OR51A4Q8NGJ6 313 aa20.52■□□□□ 0.88
VEGFA-208ENST00000417285 OR10AC1Q8NH08 325 aa20.52■□□□□ 0.88
VEGFA-208ENST00000417285 RBFOX1Q9NWB1 397 aaKnown RBP20.52■□□□□ 0.88
VEGFA-208ENST00000417285 ERVK13-1Q9NX77 482 aa20.52■□□□□ 0.88
VEGFA-208ENST00000417285 MYRFQ9Y2G1 1151 aa20.52■□□□□ 0.88
VEGFA-208ENST00000417285 TMEM82A0PJX8 343 aa20.51■□□□□ 0.87
VEGFA-208ENST00000417285 MT-ND2P03891 347 aa20.51■□□□□ 0.87
VEGFA-208ENST00000417285 ARG1P05089 322 aa20.51■□□□□ 0.87
VEGFA-208ENST00000417285 IGHV1-8P0DP01 117 aa20.51■□□□□ 0.87
VEGFA-208ENST00000417285 BCL3P20749 454 aa20.51■□□□□ 0.87
VEGFA-208ENST00000417285 NPBWR2P48146 333 aa20.51■□□□□ 0.87
VEGFA-208ENST00000417285 PDZK1IP1Q13113 114 aa20.51■□□□□ 0.87
VEGFA-208ENST00000417285 SPIN3Q5JUX0 258 aa20.51■□□□□ 0.87
VEGFA-208ENST00000417285 ZNF555Q8NEP9 628 aa20.51■□□□□ 0.87
VEGFA-208ENST00000417285 STMN2Q93045 179 aa20.51■□□□□ 0.87
VEGFA-208ENST00000417285 ZNF714Q96N38 554 aa20.51■□□□□ 0.87
VEGFA-208ENST00000417285 ISG20L2Q9H9L3 353 aaKnown RBP20.51■□□□□ 0.87
VEGFA-208ENST00000417285 TMEM212A6NML5 194 aa20.5■□□□□ 0.87
VEGFA-208ENST00000417285 ODF3BA8MYP8 253 aa20.5■□□□□ 0.87
VEGFA-208ENST00000417285 CSF1P09603 554 aa20.5■□□□□ 0.87
VEGFA-208ENST00000417285 PRKACAP17612 351 aa20.5■□□□□ 0.87
VEGFA-208ENST00000417285 GABRR1P24046 479 aa20.5■□□□□ 0.87
VEGFA-208ENST00000417285 PAX6P26367 422 aa20.5■□□□□ 0.87
VEGFA-208ENST00000417285 EDDM3AQ14507 147 aa20.5■□□□□ 0.87
VEGFA-208ENST00000417285 ZNF146Q15072 292 aa20.5■□□□□ 0.87
VEGFA-208ENST00000417285 GRK1Q15835 563 aa20.5■□□□□ 0.87
VEGFA-208ENST00000417285 ZSCAN26Q16670 478 aa20.5■□□□□ 0.87
VEGFA-208ENST00000417285 KLHL22Q53GT1 634 aa20.5■□□□□ 0.87
VEGFA-208ENST00000417285 ZNF626Q68DY1 528 aa20.5■□□□□ 0.87
VEGFA-208ENST00000417285 LHFPL4Q7Z7J7 247 aa20.5■□□□□ 0.87
VEGFA-208ENST00000417285 OR13C9Q8NGT0 318 aa20.5■□□□□ 0.87
VEGFA-208ENST00000417285 HAVCR2Q8TDQ0 301 aa20.5■□□□□ 0.87
VEGFA-208ENST00000417285 RDH12Q96NR8 316 aa20.5■□□□□ 0.87
VEGFA-208ENST00000417285 COMMD4Q9H0A8 199 aa20.5■□□□□ 0.87
VEGFA-208ENST00000417285 ZCCHC4Q9H5U6 513 aa20.5■□□□□ 0.87
VEGFA-208ENST00000417285 ABCB10Q9NRK6 738 aa20.5■□□□□ 0.87
VEGFA-208ENST00000417285 MRPS18AQ9NVS2 196 aaKnown RBP20.5■□□□□ 0.87
VEGFA-208ENST00000417285 IL36RNQ9UBH0 155 aa20.5■□□□□ 0.87
VEGFA-208ENST00000417285 SIGLEC9Q9Y336 463 aa20.5■□□□□ 0.87
VEGFA-208ENST00000417285 LINC00312Q9Y6C7 94 aa20.5■□□□□ 0.87
VEGFA-208ENST00000417285 CCDC159P0C7I6 412 aa20.49■□□□□ 0.87
VEGFA-208ENST00000417285 GBX2P52951 348 aaPredicted RBP20.49■□□□□ 0.87
VEGFA-208ENST00000417285 OR52I1Q8NGK6 324 aa20.49■□□□□ 0.87
VEGFA-208ENST00000417285 FAM110DQ8TAY7 271 aaPredicted RBP20.49■□□□□ 0.87
VEGFA-208ENST00000417285 RFT1Q96AA3 541 aa20.49■□□□□ 0.87
VEGFA-208ENST00000417285 SMPD3Q9NY59 655 aaPredicted RBP20.49■□□□□ 0.87
VEGFA-208ENST00000417285 PITPNC1Q9UKF7 332 aa20.49■□□□□ 0.87
VEGFA-208ENST00000417285 CMYA5Q8N3K9 4069 aa20.48■□□□□ 0.87
VEGFA-208ENST00000417285 MGST3O14880 152 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms