RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 VDAC2P45880 294 aaPredicted RBP11.61□□□□□ -0.55
PAF1-202ENST00000416728 GRK1Q15835 563 aa11.61□□□□□ -0.55
PAF1-202ENST00000416728 ATP6AP1Q15904 470 aa11.61□□□□□ -0.55
PAF1-202ENST00000416728 KDM4DQ6B0I6 523 aa11.61□□□□□ -0.55
PAF1-202ENST00000416728 ZDHHC13Q8IUH4 622 aa11.61□□□□□ -0.55
PAF1-202ENST00000416728 ENTHD1Q8IYW4 607 aa11.61□□□□□ -0.55
PAF1-202ENST00000416728 TPRX1Q8N7U7 411 aa11.61□□□□□ -0.55
PAF1-202ENST00000416728 OR10H4Q8NGA5 316 aa11.61□□□□□ -0.55
PAF1-202ENST00000416728 MRAPQ8TCY5 172 aa11.61□□□□□ -0.55
PAF1-202ENST00000416728 WIPF2Q8TF74 440 aaPredicted RBP11.61□□□□□ -0.55
PAF1-202ENST00000416728 SGCDQ92629 289 aa11.61□□□□□ -0.55
PAF1-202ENST00000416728 C10orf35Q96D05 121 aa11.61□□□□□ -0.55
PAF1-202ENST00000416728 CHST6Q9GZX3 395 aa11.61□□□□□ -0.55
PAF1-202ENST00000416728 SEBOXQ9HB31 216 aaPredicted RBP11.61□□□□□ -0.55
PAF1-202ENST00000416728 LOC107986453A0A1B0GWG9 222 aa11.6□□□□□ -0.55
PAF1-202ENST00000416728 ADARB2-AS1A8MUL3 147 aa11.6□□□□□ -0.55
PAF1-202ENST00000416728 CYB5AP00167 134 aa11.6□□□□□ -0.55
PAF1-202ENST00000416728 UBCP0CG48 685 aaKnown RBP11.6□□□□□ -0.55
PAF1-202ENST00000416728 JUNBP17275 347 aaPredicted RBP11.6□□□□□ -0.55
PAF1-202ENST00000416728 AZGP1P25311 298 aaKnown RBP11.6□□□□□ -0.55
PAF1-202ENST00000416728 RBP2P50120 134 aa11.6□□□□□ -0.55
PAF1-202ENST00000416728 BLCAPP62952 87 aa11.6□□□□□ -0.55
PAF1-202ENST00000416728 ZNF91Q05481 1191 aa11.6□□□□□ -0.55
PAF1-202ENST00000416728 Q6ZS46 218 aa11.6□□□□□ -0.55
PAF1-202ENST00000416728 ZBTB49Q6ZSB9 765 aa11.6□□□□□ -0.55
PAF1-202ENST00000416728 FAM220AQ7Z4H9 259 aa11.6□□□□□ -0.55
PAF1-202ENST00000416728 OR52N4Q8NGI2 321 aa11.6□□□□□ -0.55
PAF1-202ENST00000416728 PP6455Q8WZ26 134 aa11.6□□□□□ -0.55
PAF1-202ENST00000416728 CLEC7AQ9BXN2 247 aa11.6□□□□□ -0.55
PAF1-202ENST00000416728 GABARAPL1Q9H0R8 117 aa11.6□□□□□ -0.55
PAF1-202ENST00000416728 TMEM133Q9H2Q1 129 aa11.6□□□□□ -0.55
PAF1-202ENST00000416728 NECAP2Q9NVZ3 263 aa11.6□□□□□ -0.55
PAF1-202ENST00000416728 RBFOX1Q9NWB1 397 aaKnown RBP11.6□□□□□ -0.55
PAF1-202ENST00000416728 IL36RNQ9UBH0 155 aa11.6□□□□□ -0.55
PAF1-202ENST00000416728 PLXNB1O43157 2135 aa11.59□□□□□ -0.55
PAF1-202ENST00000416728 TRBV2A0A0J9YWF9 115 aa11.59□□□□□ -0.55
PAF1-202ENST00000416728 PSPNO60542 156 aa11.59□□□□□ -0.55
PAF1-202ENST00000416728 FASP25445 335 aa11.59□□□□□ -0.55
PAF1-202ENST00000416728 HTR1DP28221 377 aa11.59□□□□□ -0.55
PAF1-202ENST00000416728 DUSP1P28562 367 aa11.59□□□□□ -0.55
PAF1-202ENST00000416728 POU3F4P49335 361 aa11.59□□□□□ -0.55
PAF1-202ENST00000416728 ATP1B3P54709 279 aa11.59□□□□□ -0.55
PAF1-202ENST00000416728 IL18R1Q13478 541 aa11.59□□□□□ -0.55
PAF1-202ENST00000416728 TMEM95Q3KNT9 176 aa11.59□□□□□ -0.55
PAF1-202ENST00000416728 TRAPPC6BQ86SZ2 158 aa11.59□□□□□ -0.55
PAF1-202ENST00000416728 FAM58AQ8N1B3 248 aa11.59□□□□□ -0.55
PAF1-202ENST00000416728 PRSS35Q8N3Z0 413 aa11.59□□□□□ -0.55
PAF1-202ENST00000416728 DNAAF1Q8NEP3 725 aa11.59□□□□□ -0.55
PAF1-202ENST00000416728 PHF21AQ96BD5 680 aa11.59□□□□□ -0.55
PAF1-202ENST00000416728 CIB1Q99828 191 aa11.59□□□□□ -0.55
PAF1-202ENST00000416728 GLS2Q9UI32 602 aa11.59□□□□□ -0.55
PAF1-202ENST00000416728 NOTCH3Q9UM47 2321 aa11.58□□□□□ -0.56
PAF1-202ENST00000416728 FAM90A22PA8MWA6 464 aa11.58□□□□□ -0.56
PAF1-202ENST00000416728 MGST3O14880 152 aa11.58□□□□□ -0.56
PAF1-202ENST00000416728 ALX3O95076 343 aa11.58□□□□□ -0.56
PAF1-202ENST00000416728 PRKACAP17612 351 aa11.58□□□□□ -0.56
PAF1-202ENST00000416728 BCL3P20749 454 aa11.58□□□□□ -0.56
PAF1-202ENST00000416728 NPBWR2P48146 333 aa11.58□□□□□ -0.56
PAF1-202ENST00000416728 SNU13P55769 128 aaKnown RBP11.58□□□□□ -0.56
PAF1-202ENST00000416728 MTCP1P56278 107 aa11.58□□□□□ -0.56
PAF1-202ENST00000416728 P2RX3P56373 397 aa11.58□□□□□ -0.56
PAF1-202ENST00000416728 LOXL3P58215 753 aa11.58□□□□□ -0.56
PAF1-202ENST00000416728 ZNF146Q15072 292 aa11.58□□□□□ -0.56
PAF1-202ENST00000416728 SPIN3Q5JUX0 258 aa11.58□□□□□ -0.56
PAF1-202ENST00000416728 RDH10Q8IZV5 341 aa11.58□□□□□ -0.56
PAF1-202ENST00000416728 BCAS4Q8TDM0 211 aa11.58□□□□□ -0.56
PAF1-202ENST00000416728 CAPSLQ8WWF8 208 aa11.58□□□□□ -0.56
PAF1-202ENST00000416728 AKR1E2Q96JD6 320 aa11.58□□□□□ -0.56
PAF1-202ENST00000416728 GNG8Q9UK08 70 aa11.58□□□□□ -0.56
PAF1-202ENST00000416728 ZNF281Q9Y2X9 895 aa11.58□□□□□ -0.56
PAF1-202ENST00000416728 UBE2J1Q9Y385 318 aaPredicted RBP11.58□□□□□ -0.56
PAF1-202ENST00000416728 A0A1W2PRX2 142 aa11.57□□□□□ -0.56
PAF1-202ENST00000416728 ENTPD6O75354 484 aa11.57□□□□□ -0.56
PAF1-202ENST00000416728 CALCBP10092 127 aa11.57□□□□□ -0.56
PAF1-202ENST00000416728 PRKACBP22694 351 aa11.57□□□□□ -0.56
PAF1-202ENST00000416728 ERP29P30040 261 aaKnown RBP11.57□□□□□ -0.56
PAF1-202ENST00000416728 POLR2IP36954 125 aaKnown RBP11.57□□□□□ -0.56
PAF1-202ENST00000416728 KIR3DL2P43630 455 aa11.57□□□□□ -0.56
PAF1-202ENST00000416728 OR3A1P47881 315 aa11.57□□□□□ -0.56
PAF1-202ENST00000416728 CDC42P60953 191 aa11.57□□□□□ -0.56
PAF1-202ENST00000416728 TMED1Q13445 227 aa11.57□□□□□ -0.56
PAF1-202ENST00000416728 TP53I3Q53FA7 332 aa11.57□□□□□ -0.56
PAF1-202ENST00000416728 C16orf82Q7Z2V1 217 aa11.57□□□□□ -0.56
PAF1-202ENST00000416728 AMIGO2Q86SJ2 522 aa11.57□□□□□ -0.56
PAF1-202ENST00000416728 OR5AU1Q8NGC0 362 aa11.57□□□□□ -0.56
PAF1-202ENST00000416728 OR4P4Q8NGL7 312 aa11.57□□□□□ -0.56
PAF1-202ENST00000416728 OR8J1Q8NGP2 316 aa11.57□□□□□ -0.56
PAF1-202ENST00000416728 RFKQ969G6 155 aa11.57□□□□□ -0.56
PAF1-202ENST00000416728 ADAT3Q96EY9 351 aaPredicted RBP11.57□□□□□ -0.56
PAF1-202ENST00000416728 OCSTAMPQ9BR26 566 aa11.57□□□□□ -0.56
PAF1-202ENST00000416728 GAL3ST2Q9H3Q3 398 aa11.57□□□□□ -0.56
PAF1-202ENST00000416728 RIBC2Q9H4K1 309 aa11.57□□□□□ -0.56
PAF1-202ENST00000416728 AURKAIP1Q9NWT8 199 aaPredicted RBP11.57□□□□□ -0.56
PAF1-202ENST00000416728 AP4S1Q9Y587 144 aa11.57□□□□□ -0.56
PAF1-202ENST00000416728 TRGV10A0A0A0MS01 117 aa11.56□□□□□ -0.56
PAF1-202ENST00000416728 IGKV1-9A0A0C4DH69 117 aa11.56□□□□□ -0.56
PAF1-202ENST00000416728 SIRPB1O00241 398 aa11.56□□□□□ -0.56
PAF1-202ENST00000416728 MMP23AO75900 390 aa11.56□□□□□ -0.56
PAF1-202ENST00000416728 OCM2P0CE71 109 aa11.56□□□□□ -0.56
PAF1-202ENST00000416728 OCMP0CE72 109 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms