RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 OR3A1P47881 315 aa12.21□□□□□ -0.45
UBXN4-203ENST00000416538 ZNF626Q68DY1 528 aa12.21□□□□□ -0.45
UBXN4-203ENST00000416538 ZFP1Q6P2D0 407 aa12.21□□□□□ -0.45
UBXN4-203ENST00000416538 CCBE1Q6UXH8 406 aaPredicted RBP12.21□□□□□ -0.45
UBXN4-203ENST00000416538 BAIAP2L2Q6UXY1 529 aa12.21□□□□□ -0.45
UBXN4-203ENST00000416538 EGFL6Q8IUX8 553 aa12.21□□□□□ -0.45
UBXN4-203ENST00000416538 CCDC54Q8NEL0 328 aa12.21□□□□□ -0.45
UBXN4-203ENST00000416538 DNAAF1Q8NEP3 725 aa12.21□□□□□ -0.45
UBXN4-203ENST00000416538 OR5D18Q8NGL1 313 aa12.21□□□□□ -0.45
UBXN4-203ENST00000416538 OR13C9Q8NGT0 318 aa12.21□□□□□ -0.45
UBXN4-203ENST00000416538 APH1BQ8WW43 257 aa12.21□□□□□ -0.45
UBXN4-203ENST00000416538 SNX22Q96L94 193 aa12.21□□□□□ -0.45
UBXN4-203ENST00000416538 OPALINQ96PE5 141 aa12.21□□□□□ -0.45
UBXN4-203ENST00000416538 ADI1Q9BV57 179 aa12.21□□□□□ -0.45
UBXN4-203ENST00000416538 HEXA-AS1Q9H8Q6 139 aa12.21□□□□□ -0.45
UBXN4-203ENST00000416538 ISG20L2Q9H9L3 353 aaKnown RBP12.21□□□□□ -0.45
UBXN4-203ENST00000416538 AMBNQ9NP70 447 aa12.21□□□□□ -0.45
UBXN4-203ENST00000416538 FBLN5Q9UBX5 448 aa12.21□□□□□ -0.45
UBXN4-203ENST00000416538 FOXJ3Q9UPW0 622 aa12.21□□□□□ -0.45
UBXN4-203ENST00000416538 J3QLW9 94 aa12.2□□□□□ -0.46
UBXN4-203ENST00000416538 M0QZ24 198 aa12.2□□□□□ -0.46
UBXN4-203ENST00000416538 HTR1AP08908 422 aa12.2□□□□□ -0.46
UBXN4-203ENST00000416538 ZNF19P17023 458 aa12.2□□□□□ -0.46
UBXN4-203ENST00000416538 PRKACAP17612 351 aa12.2□□□□□ -0.46
UBXN4-203ENST00000416538 GABRA5P31644 462 aa12.2□□□□□ -0.46
UBXN4-203ENST00000416538 RBP2P50120 134 aa12.2□□□□□ -0.46
UBXN4-203ENST00000416538 RAB13P51153 203 aa12.2□□□□□ -0.46
UBXN4-203ENST00000416538 AANATQ16613 207 aa12.2□□□□□ -0.46
UBXN4-203ENST00000416538 TMEM244Q5VVB8 128 aa12.2□□□□□ -0.46
UBXN4-203ENST00000416538 MEDAGQ5VYS4 303 aa12.2□□□□□ -0.46
UBXN4-203ENST00000416538 GDPD3Q7L5L3 318 aa12.2□□□□□ -0.46
UBXN4-203ENST00000416538 LHFPL3Q86UP9 236 aa12.2□□□□□ -0.46
UBXN4-203ENST00000416538 FAM58AQ8N1B3 248 aa12.2□□□□□ -0.46
UBXN4-203ENST00000416538 ACBD7Q8N6N7 88 aa12.2□□□□□ -0.46
UBXN4-203ENST00000416538 ALG8Q9BVK2 526 aa12.2□□□□□ -0.46
UBXN4-203ENST00000416538 MMP27Q9H306 513 aa12.2□□□□□ -0.46
UBXN4-203ENST00000416538 ORC6Q9Y5N6 252 aa12.2□□□□□ -0.46
UBXN4-203ENST00000416538 GMPPBQ9Y5P6 360 aa12.2□□□□□ -0.46
UBXN4-203ENST00000416538 TGP01266 2768 aa12.2□□□□□ -0.46
UBXN4-203ENST00000416538 A0A1W2PPH5 198 aa12.19□□□□□ -0.46
UBXN4-203ENST00000416538 VGLL3A8MV65 326 aa12.19□□□□□ -0.46
UBXN4-203ENST00000416538 SIRPB1O00241 398 aa12.19□□□□□ -0.46
UBXN4-203ENST00000416538 LCE2BO14633 110 aa12.19□□□□□ -0.46
UBXN4-203ENST00000416538 TIMM23O14925 209 aa12.19□□□□□ -0.46
UBXN4-203ENST00000416538 RBP4P02753 201 aa12.19□□□□□ -0.46
UBXN4-203ENST00000416538 ARG1P05089 322 aa12.19□□□□□ -0.46
UBXN4-203ENST00000416538 ZNF20P17024 532 aa12.19□□□□□ -0.46
UBXN4-203ENST00000416538 CCR9P51686 369 aa12.19□□□□□ -0.46
UBXN4-203ENST00000416538 ATP1B3P54709 279 aa12.19□□□□□ -0.46
UBXN4-203ENST00000416538 MTCP1P56278 107 aa12.19□□□□□ -0.46
UBXN4-203ENST00000416538 PDZK1IP1Q13113 114 aa12.19□□□□□ -0.46
UBXN4-203ENST00000416538 ALKBH1Q13686 389 aaKnown RBP12.19□□□□□ -0.46
UBXN4-203ENST00000416538 HABP2Q14520 560 aaPredicted RBP12.19□□□□□ -0.46
UBXN4-203ENST00000416538 ZNF146Q15072 292 aa12.19□□□□□ -0.46
UBXN4-203ENST00000416538 GRK1Q15835 563 aa12.19□□□□□ -0.46
UBXN4-203ENST00000416538 FBLN7Q53RD9 439 aa12.19□□□□□ -0.46
UBXN4-203ENST00000416538 UTF1Q5T230 341 aa12.19□□□□□ -0.46
UBXN4-203ENST00000416538 LHFPL2Q6ZUX7 228 aa12.19□□□□□ -0.46
UBXN4-203ENST00000416538 OR11H6Q8NGC7 330 aa12.19□□□□□ -0.46
UBXN4-203ENST00000416538 OR13C3Q8NGS6 347 aa12.19□□□□□ -0.46
UBXN4-203ENST00000416538 RGP1Q92546 391 aaPredicted RBP12.19□□□□□ -0.46
UBXN4-203ENST00000416538 ZNF714Q96N38 554 aa12.19□□□□□ -0.46
UBXN4-203ENST00000416538 ZNF702PQ9H963 129 aa12.19□□□□□ -0.46
UBXN4-203ENST00000416538 SEBOXQ9HB31 216 aaPredicted RBP12.19□□□□□ -0.46
UBXN4-203ENST00000416538 S100A14Q9HCY8 104 aa12.19□□□□□ -0.46
UBXN4-203ENST00000416538 HHLA2Q9UM44 414 aa12.19□□□□□ -0.46
UBXN4-203ENST00000416538 TCF19Q9Y242 345 aa12.19□□□□□ -0.46
UBXN4-203ENST00000416538 KDM4BO94953 1096 aa12.18□□□□□ -0.46
UBXN4-203ENST00000416538 ZFPL1O95159 310 aa12.18□□□□□ -0.46
UBXN4-203ENST00000416538 SERPINA3P01011 423 aa12.18□□□□□ -0.46
UBXN4-203ENST00000416538 GABRR1P24046 479 aa12.18□□□□□ -0.46
UBXN4-203ENST00000416538 GDNFP39905 211 aa12.18□□□□□ -0.46
UBXN4-203ENST00000416538 ZP1P60852 638 aa12.18□□□□□ -0.46
UBXN4-203ENST00000416538 ACTA2P62736 377 aa12.18□□□□□ -0.46
UBXN4-203ENST00000416538 ACTG2P63267 376 aa12.18□□□□□ -0.46
UBXN4-203ENST00000416538 GALEQ14376 348 aa12.18□□□□□ -0.46
UBXN4-203ENST00000416538 PDLIM3Q53GG5 364 aaPredicted RBP12.18□□□□□ -0.46
UBXN4-203ENST00000416538 CCDC121Q6ZUS5 278 aa12.18□□□□□ -0.46
UBXN4-203ENST00000416538 KCTD20Q7Z5Y7 419 aa12.18□□□□□ -0.46
UBXN4-203ENST00000416538 TMEM219Q86XT9 240 aa12.18□□□□□ -0.46
UBXN4-203ENST00000416538 Q8IYB0 196 aa12.18□□□□□ -0.46
UBXN4-203ENST00000416538 PQLC1Q8N2U9 271 aa12.18□□□□□ -0.46
UBXN4-203ENST00000416538 C11orf44Q8N8P7 122 aa12.18□□□□□ -0.46
UBXN4-203ENST00000416538 OR52I1Q8NGK6 324 aa12.18□□□□□ -0.46
UBXN4-203ENST00000416538 RHOXF1Q8NHV9 184 aa12.18□□□□□ -0.46
UBXN4-203ENST00000416538 SPSB1Q96BD6 273 aa12.18□□□□□ -0.46
UBXN4-203ENST00000416538 NKX3-1Q99801 234 aaPredicted RBP12.18□□□□□ -0.46
UBXN4-203ENST00000416538 RANBP3Q9H6Z4 567 aaPredicted RBP12.18□□□□□ -0.46
UBXN4-203ENST00000416538 HMG20AQ9NP66 347 aa12.18□□□□□ -0.46
UBXN4-203ENST00000416538 ERVK13-1Q9NX77 482 aa12.18□□□□□ -0.46
UBXN4-203ENST00000416538 TBL2Q9Y4P3 447 aaKnown RBP12.18□□□□□ -0.46
UBXN4-203ENST00000416538 LINC00312Q9Y6C7 94 aa12.18□□□□□ -0.46
UBXN4-203ENST00000416538 IGHV2-26A0A0B4J1V2 119 aa12.17□□□□□ -0.46
UBXN4-203ENST00000416538 hCG_1809904A0A1W2PP81 198 aa12.17□□□□□ -0.46
UBXN4-203ENST00000416538 A0A1W2PPE2 198 aa12.17□□□□□ -0.46
UBXN4-203ENST00000416538 A0A1W2PR64 198 aa12.17□□□□□ -0.46
UBXN4-203ENST00000416538 A0A1W2PRV1 198 aa12.17□□□□□ -0.46
UBXN4-203ENST00000416538 A6NDX4 124 aa12.17□□□□□ -0.46
UBXN4-203ENST00000416538 WBP4O75554 376 aaKnown RBP12.17□□□□□ -0.46
UBXN4-203ENST00000416538 OR2H2O95918 312 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms