RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 CST1P01037 141 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 FTH1P02794 183 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 RPSAP08865 295 aaKnown RBP2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 HTR1AP08908 422 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 OR56A5P0C7T3 313 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 UBTFL6P0CB48 400 aaPredicted RBP2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 MUC1P15941 1255 aaPredicted RBP2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 PSMB5P28074 263 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 TEAD1P28347 426 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 PBLDP30039 288 aaPredicted RBP2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 HMOX2P30519 316 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 MAGEA2P43356 314 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 POLR2JP52435 117 aaKnown RBP2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 AP1S2P56377 157 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 CLDN8P56748 225 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 NUTF2P61970 127 aaKnown RBP2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 REEP5Q00765 189 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 LIPEQ05469 1076 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 BNIP2Q12982 314 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 DDX39BQ13838 428 aaKnown RBP2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 DOC2AQ14183 400 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 GINS1Q14691 196 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 PDGFRLQ15198 375 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 CST6Q15828 149 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 STK11Q15831 433 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 ATP6AP1LQ52LC2 224 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 PRAMEF5Q5TYX0 476 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 PRAMEF6Q5VXH4 476 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 LAIR2Q6ISS4 152 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 ZFP1Q6P2D0 407 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 PRMT9Q6P2P2 845 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 TTC23LQ6PF05 361 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 AGTRAPQ6RW13 159 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 PP632Q6XCG6 107 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 ASCL5Q7RTU5 278 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 COMTD1Q86VU5 262 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 MMAAQ8IVH4 418 aaKnown RBP2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 CLECL1Q8IZS7 167 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 UBE2J2Q8N2K1 259 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 TCAIMQ8N3R3 496 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 OR8J3Q8NGG0 315 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 OR52E4Q8NGH9 312 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 OR5AR1Q8NGP9 310 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 OR1S2Q8NGQ3 325 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 CANT1Q8WVQ1 401 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 OR8D1Q8WZ84 308 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 ELMO1Q92556 727 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 N4BP2L2Q92802 583 aaPredicted RBP2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 SEH1LQ96EE3 360 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 PDXPQ96GD0 296 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 PPP3R2Q96LZ3 170 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 CGREF1Q99674 301 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 EBPLQ9BY08 206 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 MS4A8Q9BY19 250 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 UBE2ZQ9H832 354 aaPredicted RBP2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 EFCAB1Q9HAE3 211 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 PARVBQ9HBI1 364 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 HMG20AQ9NP66 347 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 ZNF355PQ9NSJ1 428 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 ARMC1Q9NVT9 282 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 C1orf109Q9NX04 203 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 ZNRD1Q9P1U0 126 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 OPTCQ9UBM4 332 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 SLC22A14Q9Y267 594 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 SLC17A4Q9Y2C5 497 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 NDUFAF1Q9Y375 327 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 MRPS18BQ9Y676 258 aaKnown RBP2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 C5orf42Q9H799 3197 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 MPDZO75970 2070 aa2.11□□□□□ -2.07
HMGB1P11-201ENST00000413899 ARHGAP21Q5T5U3 1957 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 NINQ8N4C6 2090 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 A0A0A6YYD5 115 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 DHRS12A0PJE2 317 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 MGAT4DA6NG13 374 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 H0YJX3 145 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 SCAMP2O15127 329 aaKnown RBP2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 AIFM1O95831 613 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 EPPINO95925 133 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 IGLV3-19P01714 112 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 CATP04040 527 aaKnown RBP2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 HLA-DPB1P04440 258 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 FABP3P05413 133 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 CRYGBP07316 175 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 ANXA5P08758 320 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 GPX2P18283 190 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 GABRG2P18507 467 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 GDI1P31150 447 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 AQP2P41181 271 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 CSNK1A1P48729 337 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 GTF2A1P52655 376 aaPredicted RBP2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 RAP1AP62834 184 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 ARG2P78540 354 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 ADARB1P78563 741 aaKnown RBP2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 LOXL1Q08397 574 aaPredicted RBP2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 SYCNQ0VAF6 134 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 FUT5Q11128 374 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 STX5Q13190 355 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 PON2Q15165 354 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 LY6EQ16553 131 aa2.1□□□□□ -2.07
HMGB1P11-201ENST00000413899 TMEM31Q5JXX7 168 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms