RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 TFAP2CQ92754 450 aa12.13□□□□□ -0.47
LIMS4-201ENST00000413601 TAF15Q92804 592 aaKnown RBP eCLIP12.13□□□□□ -0.47
LIMS4-201ENST00000413601 UNKLQ9H9P5 680 aaKnown RBP12.13□□□□□ -0.47
LIMS4-201ENST00000413601 NEK6Q9HC98 313 aa12.13□□□□□ -0.47
LIMS4-201ENST00000413601 CHCHD3Q9NX63 227 aaKnown RBP12.13□□□□□ -0.47
LIMS4-201ENST00000413601 BABAM2Q9NXR7 383 aa12.13□□□□□ -0.47
LIMS4-201ENST00000413601 TMEM82A0PJX8 343 aa12.12□□□□□ -0.47
LIMS4-201ENST00000413601 MEX3AA1L020 520 aaKnown RBP12.12□□□□□ -0.47
LIMS4-201ENST00000413601 NPFFO15130 113 aa12.12□□□□□ -0.47
LIMS4-201ENST00000413601 OGG1O15527 345 aa12.12□□□□□ -0.47
LIMS4-201ENST00000413601 ALX3O95076 343 aa12.12□□□□□ -0.47
LIMS4-201ENST00000413601 HAND1O96004 215 aa12.12□□□□□ -0.47
LIMS4-201ENST00000413601 CCL3L1P16619 93 aa12.12□□□□□ -0.47
LIMS4-201ENST00000413601 CFPP27918 469 aa12.12□□□□□ -0.47
LIMS4-201ENST00000413601 UBE2E1P51965 193 aa12.12□□□□□ -0.47
LIMS4-201ENST00000413601 MED21Q13503 144 aa12.12□□□□□ -0.47
LIMS4-201ENST00000413601 ZNF273Q14593 569 aa12.12□□□□□ -0.47
LIMS4-201ENST00000413601 NCR3LG1Q68D85 454 aa12.12□□□□□ -0.47
LIMS4-201ENST00000413601 HCP5Q6MZN7 132 aa12.12□□□□□ -0.47
LIMS4-201ENST00000413601 C16orf87Q6PH81 154 aa12.12□□□□□ -0.47
LIMS4-201ENST00000413601 C17orf107Q6ZR85 190 aa12.12□□□□□ -0.47
LIMS4-201ENST00000413601 GDPD3Q7L5L3 318 aa12.12□□□□□ -0.47
LIMS4-201ENST00000413601 OR5D13Q8NGL4 314 aa12.12□□□□□ -0.47
LIMS4-201ENST00000413601 OR52N1Q8NH53 320 aa12.12□□□□□ -0.47
LIMS4-201ENST00000413601 GPR148Q8TDV2 347 aa12.12□□□□□ -0.47
LIMS4-201ENST00000413601 NRG4Q8WWG1 115 aa12.12□□□□□ -0.47
LIMS4-201ENST00000413601 CHIAQ9BZP6 476 aa12.12□□□□□ -0.47
LIMS4-201ENST00000413601 PSORS1C1Q9UIG5 152 aa12.12□□□□□ -0.47
LIMS4-201ENST00000413601 FAM96BQ9Y3D0 163 aa12.12□□□□□ -0.47
LIMS4-201ENST00000413601 KIAA2026Q5HYC2 2103 aa12.11□□□□□ -0.47
LIMS4-201ENST00000413601 A0A1W2PPH5 198 aa12.11□□□□□ -0.47
LIMS4-201ENST00000413601 EFCAB10A6NFE3 127 aa12.11□□□□□ -0.47
LIMS4-201ENST00000413601 KDM4BO94953 1096 aa12.11□□□□□ -0.47
LIMS4-201ENST00000413601 TMEM225BP0DP42 221 aa12.11□□□□□ -0.47
LIMS4-201ENST00000413601 GABRR1P24046 479 aa12.11□□□□□ -0.47
LIMS4-201ENST00000413601 SAA4P35542 130 aa12.11□□□□□ -0.47
LIMS4-201ENST00000413601 EDDM3BP56851 147 aa12.11□□□□□ -0.47
LIMS4-201ENST00000413601 ERVFRD-1P60508 538 aa12.11□□□□□ -0.47
LIMS4-201ENST00000413601 ZNF146Q15072 292 aa12.11□□□□□ -0.47
LIMS4-201ENST00000413601 KISS1Q15726 138 aa12.11□□□□□ -0.47
LIMS4-201ENST00000413601 AWAT1Q58HT5 328 aa12.11□□□□□ -0.47
LIMS4-201ENST00000413601 ASPHD2Q6ICH7 369 aa12.11□□□□□ -0.47
LIMS4-201ENST00000413601 AHSA2Q719I0 299 aa12.11□□□□□ -0.47
LIMS4-201ENST00000413601 OR8H2Q8N162 312 aa12.11□□□□□ -0.47
LIMS4-201ENST00000413601 C11orf42Q8N5U0 333 aa12.11□□□□□ -0.47
LIMS4-201ENST00000413601 C3orf56Q8N813 242 aa12.11□□□□□ -0.47
LIMS4-201ENST00000413601 ZFP41Q8N8Y5 198 aa12.11□□□□□ -0.47
LIMS4-201ENST00000413601 ZNF485Q8NCK3 441 aa12.11□□□□□ -0.47
LIMS4-201ENST00000413601 BPIFB6Q8NFQ5 453 aa12.11□□□□□ -0.47
LIMS4-201ENST00000413601 OR52N4Q8NGI2 321 aa12.11□□□□□ -0.47
LIMS4-201ENST00000413601 OR51A2Q8NGJ7 313 aa12.11□□□□□ -0.47
LIMS4-201ENST00000413601 TBC1D15Q8TC07 691 aa12.11□□□□□ -0.47
LIMS4-201ENST00000413601 SSMEM1Q8WWF3 244 aa12.11□□□□□ -0.47
LIMS4-201ENST00000413601 SNX22Q96L94 193 aa12.11□□□□□ -0.47
LIMS4-201ENST00000413601 CHST6Q9GZX3 395 aa12.11□□□□□ -0.47
LIMS4-201ENST00000413601 SEBOXQ9HB31 216 aaPredicted RBP12.11□□□□□ -0.47
LIMS4-201ENST00000413601 HMG20AQ9NP66 347 aa12.11□□□□□ -0.47
LIMS4-201ENST00000413601 PLCXD1Q9NUJ7 323 aa12.11□□□□□ -0.47
LIMS4-201ENST00000413601 TAS2R4Q9NYW5 299 aa12.11□□□□□ -0.47
LIMS4-201ENST00000413601 CNOT2Q9NZN8 540 aaKnown RBP12.11□□□□□ -0.47
LIMS4-201ENST00000413601 GSTK1Q9Y2Q3 226 aa12.11□□□□□ -0.47
LIMS4-201ENST00000413601 MEIOCA2RUB1 952 aa12.1□□□□□ -0.47
LIMS4-201ENST00000413601 FAM181BA6NEQ2 426 aa12.1□□□□□ -0.47
LIMS4-201ENST00000413601 SIRPB1O00241 398 aa12.1□□□□□ -0.47
LIMS4-201ENST00000413601 PSPNO60542 156 aa12.1□□□□□ -0.47
LIMS4-201ENST00000413601 IGHV4-59P01825 116 aa12.1□□□□□ -0.47
LIMS4-201ENST00000413601 CD2P06729 351 aa12.1□□□□□ -0.47
LIMS4-201ENST00000413601 RAB3AP20336 220 aa12.1□□□□□ -0.47
LIMS4-201ENST00000413601 C21orf33P30042 268 aaPredicted RBP12.1□□□□□ -0.47
LIMS4-201ENST00000413601 IER3P46695 156 aa12.1□□□□□ -0.47
LIMS4-201ENST00000413601 AQP4P55087 323 aa12.1□□□□□ -0.47
LIMS4-201ENST00000413601 ZP1P60852 638 aa12.1□□□□□ -0.47
LIMS4-201ENST00000413601 FOXL1Q12952 345 aa12.1□□□□□ -0.47
LIMS4-201ENST00000413601 EDDM3AQ14507 147 aa12.1□□□□□ -0.47
LIMS4-201ENST00000413601 GRK1Q15835 563 aa12.1□□□□□ -0.47
LIMS4-201ENST00000413601 SPIN3Q5JUX0 258 aa12.1□□□□□ -0.47
LIMS4-201ENST00000413601 DMKNQ6E0U4 476 aaPredicted RBP12.1□□□□□ -0.47
LIMS4-201ENST00000413601 ZNF529Q6P280 563 aa12.1□□□□□ -0.47
LIMS4-201ENST00000413601 SATL1Q86VE3 508 aa12.1□□□□□ -0.47
LIMS4-201ENST00000413601 LDLRAD3Q86YD5 345 aa12.1□□□□□ -0.47
LIMS4-201ENST00000413601 SAXO1Q8IYX7 474 aa12.1□□□□□ -0.47
LIMS4-201ENST00000413601 STX19Q8N4C7 294 aa12.1□□□□□ -0.47
LIMS4-201ENST00000413601 TMEM86BQ8N661 226 aa12.1□□□□□ -0.47
LIMS4-201ENST00000413601 OR13C5Q8NGS8 318 aa12.1□□□□□ -0.47
LIMS4-201ENST00000413601 GHSRQ92847 366 aa12.1□□□□□ -0.47
LIMS4-201ENST00000413601 TMEM106AQ96A25 262 aa12.1□□□□□ -0.47
LIMS4-201ENST00000413601 SMIM19Q96E16 107 aa12.1□□□□□ -0.47
LIMS4-201ENST00000413601 GLS2Q9UI32 602 aa12.1□□□□□ -0.47
LIMS4-201ENST00000413601 ZNF281Q9Y2X9 895 aa12.1□□□□□ -0.47
LIMS4-201ENST00000413601 SF3B6Q9Y3B4 125 aaKnown RBP12.1□□□□□ -0.47
LIMS4-201ENST00000413601 POMT1Q9Y6A1 747 aa12.1□□□□□ -0.47
LIMS4-201ENST00000413601 TENM1Q9UKZ4 2725 aa12.1□□□□□ -0.47
LIMS4-201ENST00000413601 hCG_1809904A0A1W2PP81 198 aa12.09□□□□□ -0.47
LIMS4-201ENST00000413601 A0A1W2PPE2 198 aa12.09□□□□□ -0.47
LIMS4-201ENST00000413601 A0A1W2PR64 198 aa12.09□□□□□ -0.47
LIMS4-201ENST00000413601 A0A1W2PRV1 198 aa12.09□□□□□ -0.47
LIMS4-201ENST00000413601 SH2D1BO14796 132 aa12.09□□□□□ -0.47
LIMS4-201ENST00000413601 FBP1P09467 338 aa12.09□□□□□ -0.47
LIMS4-201ENST00000413601 OMGP23515 440 aa12.09□□□□□ -0.47
LIMS4-201ENST00000413601 DLX6P56179 175 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms