RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 ETFRF1Q6IPR1 90 aa12.25□□□□□ -0.45
CLTCL1-201ENST00000412649 LINC00114Q6XXX2 140 aa12.25□□□□□ -0.45
CLTCL1-201ENST00000412649 MCEMP1Q8IX19 187 aa12.25□□□□□ -0.45
CLTCL1-201ENST00000412649 TMEM156Q8N614 296 aa12.25□□□□□ -0.45
CLTCL1-201ENST00000412649 PSMF1Q92530 271 aa12.25□□□□□ -0.45
CLTCL1-201ENST00000412649 TMEM68Q96MH6 324 aa12.25□□□□□ -0.45
CLTCL1-201ENST00000412649 C19orf25Q9UFG5 118 aaPredicted RBP12.25□□□□□ -0.45
CLTCL1-201ENST00000412649 ST3GAL6Q9Y274 331 aa12.25□□□□□ -0.45
CLTCL1-201ENST00000412649 PLXNA3P51805 1871 aa12.25□□□□□ -0.45
CLTCL1-201ENST00000412649 CASP8AP2Q9UKL3 1982 aa12.25□□□□□ -0.45
CLTCL1-201ENST00000412649 SCN8AQ9UQD0 1980 aa12.25□□□□□ -0.45
CLTCL1-201ENST00000412649 IGLV1-36A0A0B4J1U3 117 aa12.25□□□□□ -0.45
CLTCL1-201ENST00000412649 CTGFP29279 349 aa12.25□□□□□ -0.45
CLTCL1-201ENST00000412649 PTTG1IPP53801 180 aa12.25□□□□□ -0.45
CLTCL1-201ENST00000412649 ZNF90Q03938 601 aa12.25□□□□□ -0.45
CLTCL1-201ENST00000412649 CSRP2Q16527 193 aa12.25□□□□□ -0.45
CLTCL1-201ENST00000412649 NKAIN1Q4KMZ8 207 aa12.25□□□□□ -0.45
CLTCL1-201ENST00000412649 HLA-CQ95604 372 aa12.25□□□□□ -0.45
CLTCL1-201ENST00000412649 TM4SF19Q96DZ7 209 aa12.25□□□□□ -0.45
CLTCL1-201ENST00000412649 WBP1LQ9NX94 342 aa12.25□□□□□ -0.45
CLTCL1-201ENST00000412649 WDR90Q96KV7 1748 aa12.25□□□□□ -0.45
CLTCL1-201ENST00000412649 LOC102725191A0A1B0GVB3 256 aa12.25□□□□□ -0.45
CLTCL1-201ENST00000412649 CXCL10P02778 98 aa12.25□□□□□ -0.45
CLTCL1-201ENST00000412649 GUSBP08236 651 aa12.25□□□□□ -0.45
CLTCL1-201ENST00000412649 HLA-DOBP13765 273 aa12.25□□□□□ -0.45
CLTCL1-201ENST00000412649 KRTDAPP60985 99 aa12.25□□□□□ -0.45
CLTCL1-201ENST00000412649 TMEM267Q0VDI3 215 aaPredicted RBP12.25□□□□□ -0.45
CLTCL1-201ENST00000412649 C20orf196Q8IYI0 205 aa12.25□□□□□ -0.45
CLTCL1-201ENST00000412649 MUCL1Q96DR8 90 aa12.25□□□□□ -0.45
CLTCL1-201ENST00000412649 FAM103A1Q9BTL3 118 aaKnown RBP12.25□□□□□ -0.45
CLTCL1-201ENST00000412649 ACTR3CQ9C0K3 210 aaPredicted RBP12.25□□□□□ -0.45
CLTCL1-201ENST00000412649 PRAMEF26H0Y7S4 382 aa12.24□□□□□ -0.45
CLTCL1-201ENST00000412649 TRAPPC2LH3BP13 241 aa12.24□□□□□ -0.45
CLTCL1-201ENST00000412649 TNFSF14O43557 240 aa12.24□□□□□ -0.45
CLTCL1-201ENST00000412649 MT-CO2P00403 227 aa12.24□□□□□ -0.45
CLTCL1-201ENST00000412649 MMP9P14780 707 aa12.24□□□□□ -0.45
CLTCL1-201ENST00000412649 RAC2P15153 192 aa12.24□□□□□ -0.45
CLTCL1-201ENST00000412649 RUNX1Q01196 453 aa12.24□□□□□ -0.45
CLTCL1-201ENST00000412649 ZNF154Q13106 437 aa12.24□□□□□ -0.45
CLTCL1-201ENST00000412649 BATF2Q8N1L9 274 aa12.24□□□□□ -0.45
CLTCL1-201ENST00000412649 OR5R1Q8NH85 324 aa12.24□□□□□ -0.45
CLTCL1-201ENST00000412649 ASB10Q8WXI3 467 aa12.24□□□□□ -0.45
CLTCL1-201ENST00000412649 TP53TG5Q9Y2B4 290 aa12.24□□□□□ -0.45
CLTCL1-201ENST00000412649 CRYM-AS1A6NIL9 109 aa12.24□□□□□ -0.45
CLTCL1-201ENST00000412649 TMEM14DPA8MWL7 114 aa12.24□□□□□ -0.45
CLTCL1-201ENST00000412649 GPR3P46089 330 aa12.24□□□□□ -0.45
CLTCL1-201ENST00000412649 DTD1Q8TEA8 209 aa12.24□□□□□ -0.45
CLTCL1-201ENST00000412649 TECTBQ96PL2 329 aa12.24□□□□□ -0.45
CLTCL1-201ENST00000412649 MENTQ9BUN1 341 aa12.24□□□□□ -0.45
CLTCL1-201ENST00000412649 NKX2-6A6NCS4 301 aa12.24□□□□□ -0.45
CLTCL1-201ENST00000412649 TCF21O43680 179 aa12.24□□□□□ -0.45
CLTCL1-201ENST00000412649 CTXN2P0C2S0 81 aa12.24□□□□□ -0.45
CLTCL1-201ENST00000412649 BCL2P10415 239 aa12.24□□□□□ -0.45
CLTCL1-201ENST00000412649 MYOGP15173 224 aa12.24□□□□□ -0.45
CLTCL1-201ENST00000412649 HNRNPA3P51991 378 aaKnown RBP12.24□□□□□ -0.45
CLTCL1-201ENST00000412649 FAM3BP58499 235 aaPredicted RBP12.24□□□□□ -0.45
CLTCL1-201ENST00000412649 ZNF658BQ4V348 819 aaPredicted RBP12.24□□□□□ -0.45
CLTCL1-201ENST00000412649 HIST3H2BBQ8N257 126 aa12.24□□□□□ -0.45
CLTCL1-201ENST00000412649 OSR2Q8N2R0 312 aa12.24□□□□□ -0.45
CLTCL1-201ENST00000412649 NOXO1Q8NFA2 376 aa12.24□□□□□ -0.45
CLTCL1-201ENST00000412649 SP7Q8TDD2 431 aaPredicted RBP12.24□□□□□ -0.45
CLTCL1-201ENST00000412649 ALG1L2C9J202 215 aa12.23□□□□□ -0.45
CLTCL1-201ENST00000412649 CMTM2Q8TAZ6 248 aa12.23□□□□□ -0.45
CLTCL1-201ENST00000412649 CTHRC1Q96CG8 243 aa12.23□□□□□ -0.45
CLTCL1-201ENST00000412649 TBX15Q96SF7 602 aa12.23□□□□□ -0.45
CLTCL1-201ENST00000412649 RTBDNQ9BSG5 229 aaPredicted RBP12.23□□□□□ -0.45
CLTCL1-201ENST00000412649 F5P12259 2224 aa12.23□□□□□ -0.45
CLTCL1-201ENST00000412649 A0A1W2PNV4 684 aa12.23□□□□□ -0.45
CLTCL1-201ENST00000412649 PLRG1O43660 514 aaKnown RBP12.23□□□□□ -0.45
CLTCL1-201ENST00000412649 IGHV2-5P01817 119 aa12.23□□□□□ -0.45
CLTCL1-201ENST00000412649 CHRNA7P36544 502 aa12.23□□□□□ -0.45
CLTCL1-201ENST00000412649 DPPA3Q6W0C5 159 aa12.23□□□□□ -0.45
CLTCL1-201ENST00000412649 LANCL3Q6ZV70 420 aa12.23□□□□□ -0.45
CLTCL1-201ENST00000412649 FBXL14Q8N1E6 418 aa12.23□□□□□ -0.45
CLTCL1-201ENST00000412649 G6PC2Q9NQR9 355 aa12.23□□□□□ -0.45
CLTCL1-201ENST00000412649 PILRAQ9UKJ1 303 aa12.23□□□□□ -0.45
CLTCL1-201ENST00000412649 MCTS1Q9ULC4 181 aaKnown RBP12.23□□□□□ -0.45
CLTCL1-201ENST00000412649 DUXBA0A1W2PPF3 345 aa12.23□□□□□ -0.45
CLTCL1-201ENST00000412649 C9JQL5 133 aa12.23□□□□□ -0.45
CLTCL1-201ENST00000412649 F6UZH7 168 aa12.23□□□□□ -0.45
CLTCL1-201ENST00000412649 DHRS3O75911 302 aa12.23□□□□□ -0.45
CLTCL1-201ENST00000412649 EML2O95834 649 aa12.23□□□□□ -0.45
CLTCL1-201ENST00000412649 IGFBP3P17936 291 aaPredicted RBP12.23□□□□□ -0.45
CLTCL1-201ENST00000412649 OR3A1P47881 315 aa12.23□□□□□ -0.45
CLTCL1-201ENST00000412649 LHFPL2Q6ZUX7 228 aa12.23□□□□□ -0.45
CLTCL1-201ENST00000412649 LRP11Q86VZ4 500 aa12.23□□□□□ -0.45
CLTCL1-201ENST00000412649 H1FOOQ8IZA3 346 aaPredicted RBP12.23□□□□□ -0.45
CLTCL1-201ENST00000412649 MISP3Q96FF7 219 aa12.23□□□□□ -0.45
CLTCL1-201ENST00000412649 ACY3Q96HD9 319 aa12.23□□□□□ -0.45
CLTCL1-201ENST00000412649 SERTAD4Q9NUC0 356 aa12.23□□□□□ -0.45
CLTCL1-201ENST00000412649 ZNF816-ZNF321PA0A0X1KG74 233 aa12.23□□□□□ -0.45
CLTCL1-201ENST00000412649 ANKUB1A6NFN9 424 aa12.23□□□□□ -0.45
CLTCL1-201ENST00000412649 HSBP1L1C9JCN9 74 aa12.23□□□□□ -0.45
CLTCL1-201ENST00000412649 TLE1Q04724 770 aa12.23□□□□□ -0.45
CLTCL1-201ENST00000412649 MGAT2Q10469 447 aa12.23□□□□□ -0.45
CLTCL1-201ENST00000412649 FUT7Q11130 342 aa12.23□□□□□ -0.45
CLTCL1-201ENST00000412649 ELOBQ15370 118 aa12.23□□□□□ -0.45
CLTCL1-201ENST00000412649 PDLIM3Q53GG5 364 aaPredicted RBP12.23□□□□□ -0.45
CLTCL1-201ENST00000412649 GFI1BQ5VTD9 330 aa12.23□□□□□ -0.45
CLTCL1-201ENST00000412649 C16orf82Q7Z2V1 217 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms