RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 ABHD12Q8N2K0 398 aa13.35□□□□□ -0.27
MRPL55-220ENST00000411464 CANT1Q8WVQ1 401 aa13.35□□□□□ -0.27
MRPL55-220ENST00000411464 MNTQ99583 582 aa13.35□□□□□ -0.27
MRPL55-220ENST00000411464 GPR61Q9BZJ8 451 aa13.35□□□□□ -0.27
MRPL55-220ENST00000411464 CHST6Q9GZX3 395 aa13.35□□□□□ -0.27
MRPL55-220ENST00000411464 H2AFY2Q9P0M6 372 aaPredicted RBP13.35□□□□□ -0.27
MRPL55-220ENST00000411464 DPM3Q9P2X0 92 aa13.35□□□□□ -0.27
MRPL55-220ENST00000411464 COL7A1Q02388 2944 aa13.35□□□□□ -0.27
MRPL55-220ENST00000411464 ZNF670-ZNF695F2Z2N8 137 aa13.34□□□□□ -0.27
MRPL55-220ENST00000411464 GATBO75879 557 aaKnown RBP13.34□□□□□ -0.27
MRPL55-220ENST00000411464 HAND1O96004 215 aa13.34□□□□□ -0.27
MRPL55-220ENST00000411464 SERPINA3P01011 423 aa13.34□□□□□ -0.27
MRPL55-220ENST00000411464 IGHA1P01876 353 aa13.34□□□□□ -0.27
MRPL55-220ENST00000411464 HOXB6P17509 224 aaKnown RBP13.34□□□□□ -0.27
MRPL55-220ENST00000411464 HOXD3P31249 432 aaPredicted RBP13.34□□□□□ -0.27
MRPL55-220ENST00000411464 CRISP1P54107 249 aa13.34□□□□□ -0.27
MRPL55-220ENST00000411464 EGFEM1PQ0D2K5 195 aa13.34□□□□□ -0.27
MRPL55-220ENST00000411464 OR52W1Q6IF63 320 aa13.34□□□□□ -0.27
MRPL55-220ENST00000411464 MEPCEQ7L2J0 689 aaKnown RBP13.34□□□□□ -0.27
MRPL55-220ENST00000411464 Q8IYB0 196 aa13.34□□□□□ -0.27
MRPL55-220ENST00000411464 OR52N4Q8NGI2 321 aa13.34□□□□□ -0.27
MRPL55-220ENST00000411464 OR4P4Q8NGL7 312 aa13.34□□□□□ -0.27
MRPL55-220ENST00000411464 ZNF596Q8TC21 504 aa13.34□□□□□ -0.27
MRPL55-220ENST00000411464 EMG1Q92979 244 aaKnown RBP13.34□□□□□ -0.27
MRPL55-220ENST00000411464 WWC2-AS2Q96NR7 200 aa13.34□□□□□ -0.27
MRPL55-220ENST00000411464 SLC25A33Q9BSK2 321 aa13.34□□□□□ -0.27
MRPL55-220ENST00000411464 SEBOXQ9HB31 216 aaPredicted RBP13.34□□□□□ -0.27
MRPL55-220ENST00000411464 GLS2Q9UI32 602 aa13.34□□□□□ -0.27
MRPL55-220ENST00000411464 TENM3Q9P273 2699 aa13.34□□□□□ -0.27
MRPL55-220ENST00000411464 MGST3O14880 152 aa13.33□□□□□ -0.28
MRPL55-220ENST00000411464 SYT7O43581 403 aa13.33□□□□□ -0.28
MRPL55-220ENST00000411464 OR2F2O95006 317 aa13.33□□□□□ -0.28
MRPL55-220ENST00000411464 RPP14O95059 124 aaKnown RBP13.33□□□□□ -0.28
MRPL55-220ENST00000411464 CCL1P22362 96 aa13.33□□□□□ -0.28
MRPL55-220ENST00000411464 BDH1Q02338 343 aa13.33□□□□□ -0.28
MRPL55-220ENST00000411464 UBE2V2Q15819 145 aa13.33□□□□□ -0.28
MRPL55-220ENST00000411464 ODF4Q2M2E3 257 aa13.33□□□□□ -0.28
MRPL55-220ENST00000411464 RTN4RL2Q86UN3 420 aa13.33□□□□□ -0.28
MRPL55-220ENST00000411464 BORCS8Q96FH0 119 aa13.33□□□□□ -0.28
MRPL55-220ENST00000411464 RBM14Q96PK6 669 aaKnown RBP13.33□□□□□ -0.28
MRPL55-220ENST00000411464 ADI1Q9BV57 179 aa13.33□□□□□ -0.28
MRPL55-220ENST00000411464 PRRG3Q9BZD7 231 aa13.33□□□□□ -0.28
MRPL55-220ENST00000411464 GAL3ST2Q9H3Q3 398 aa13.33□□□□□ -0.28
MRPL55-220ENST00000411464 PAPOLBQ9NRJ5 636 aaKnown RBP13.33□□□□□ -0.28
MRPL55-220ENST00000411464 CLN6Q9NWW5 311 aa13.33□□□□□ -0.28
MRPL55-220ENST00000411464 MRM2Q9UI43 246 aaKnown RBP13.33□□□□□ -0.28
MRPL55-220ENST00000411464 UBE2J1Q9Y385 318 aaPredicted RBP13.33□□□□□ -0.28
MRPL55-220ENST00000411464 IGKV1-27A0A075B6S5 117 aa13.32□□□□□ -0.28
MRPL55-220ENST00000411464 TRGV10A0A0A0MS01 117 aa13.32□□□□□ -0.28
MRPL55-220ENST00000411464 AQP12BA6NM10 295 aa13.32□□□□□ -0.28
MRPL55-220ENST00000411464 LEUTXA8MZ59 168 aa13.32□□□□□ -0.28
MRPL55-220ENST00000411464 H3BSH0 61 aa13.32□□□□□ -0.28
MRPL55-220ENST00000411464 PRKYO43930 277 aa13.32□□□□□ -0.28
MRPL55-220ENST00000411464 PSPNO60542 156 aa13.32□□□□□ -0.28
MRPL55-220ENST00000411464 MMP23AO75900 390 aa13.32□□□□□ -0.28
MRPL55-220ENST00000411464 CYB5AP00167 134 aa13.32□□□□□ -0.28
MRPL55-220ENST00000411464 DUSP1P28562 367 aa13.32□□□□□ -0.28
MRPL55-220ENST00000411464 ERP29P30040 261 aaKnown RBP13.32□□□□□ -0.28
MRPL55-220ENST00000411464 P2RX3P56373 397 aa13.32□□□□□ -0.28
MRPL55-220ENST00000411464 PTGES3Q15185 160 aaKnown RBP13.32□□□□□ -0.28
MRPL55-220ENST00000411464 C9orf152Q5JTZ5 239 aa13.32□□□□□ -0.28
MRPL55-220ENST00000411464 C10orf99Q6UWK7 81 aa13.32□□□□□ -0.28
MRPL55-220ENST00000411464 BCDIN3DQ7Z5W3 292 aaKnown RBP13.32□□□□□ -0.28
MRPL55-220ENST00000411464 AQP12AQ8IXF9 295 aa13.32□□□□□ -0.28
MRPL55-220ENST00000411464 YIPF7Q8N8F6 280 aa13.32□□□□□ -0.28
MRPL55-220ENST00000411464 OR51D1Q8NGF3 324 aa13.32□□□□□ -0.28
MRPL55-220ENST00000411464 DNAJC9Q8WXX5 260 aa13.32□□□□□ -0.28
MRPL55-220ENST00000411464 CREB3L1Q96BA8 519 aa13.32□□□□□ -0.28
MRPL55-220ENST00000411464 B9D2Q9BPU9 175 aa13.32□□□□□ -0.28
MRPL55-220ENST00000411464 ADGRL4Q9HBW9 690 aa13.32□□□□□ -0.28
MRPL55-220ENST00000411464 M0QZK8 103 aa13.31□□□□□ -0.28
MRPL55-220ENST00000411464 KRT8P05787 483 aa13.31□□□□□ -0.28
MRPL55-220ENST00000411464 CALB2P22676 271 aa13.31□□□□□ -0.28
MRPL55-220ENST00000411464 CEACAM3P40198 252 aa13.31□□□□□ -0.28
MRPL55-220ENST00000411464 ZNF91Q05481 1191 aa13.31□□□□□ -0.28
MRPL55-220ENST00000411464 DCTN2Q13561 401 aaKnown RBP13.31□□□□□ -0.28
MRPL55-220ENST00000411464 PRAMEF5Q5TYX0 476 aa13.31□□□□□ -0.28
MRPL55-220ENST00000411464 FAM58AQ8N1B3 248 aa13.31□□□□□ -0.28
MRPL55-220ENST00000411464 OSR2Q8N2R0 312 aa13.31□□□□□ -0.28
MRPL55-220ENST00000411464 LINC00482Q8N8I6 264 aa13.31□□□□□ -0.28
MRPL55-220ENST00000411464 CCDC54Q8NEL0 328 aa13.31□□□□□ -0.28
MRPL55-220ENST00000411464 ZNF649Q9BS31 505 aa13.31□□□□□ -0.28
MRPL55-220ENST00000411464 CHST5Q9GZS9 411 aa13.31□□□□□ -0.28
MRPL55-220ENST00000411464 RBFOX1Q9NWB1 397 aaKnown RBP13.31□□□□□ -0.28
MRPL55-220ENST00000411464 IL36RNQ9UBH0 155 aa13.31□□□□□ -0.28
MRPL55-220ENST00000411464 DNAH3Q8TD57 4116 aa13.3□□□□□ -0.28
MRPL55-220ENST00000411464 TRBV2A0A0J9YWF9 115 aa13.3□□□□□ -0.28
MRPL55-220ENST00000411464 FUOMA2VDF0 154 aa13.3□□□□□ -0.28
MRPL55-220ENST00000411464 SH2D7A6NKC9 451 aaPredicted RBP13.3□□□□□ -0.28
MRPL55-220ENST00000411464 TOR1AO14656 332 aa13.3□□□□□ -0.28
MRPL55-220ENST00000411464 AMY1AP04745 511 aa13.3□□□□□ -0.28
MRPL55-220ENST00000411464 AMY2AP04746 511 aa13.3□□□□□ -0.28
MRPL55-220ENST00000411464 CDK2P24941 298 aa13.3□□□□□ -0.28
MRPL55-220ENST00000411464 MNDAP41218 407 aa13.3□□□□□ -0.28
MRPL55-220ENST00000411464 RBP2P50120 134 aa13.3□□□□□ -0.28
MRPL55-220ENST00000411464 ATP1B3P54709 279 aa13.3□□□□□ -0.28
MRPL55-220ENST00000411464 CDC42P60953 191 aa13.3□□□□□ -0.28
MRPL55-220ENST00000411464 KPNB1Q14974 876 aaKnown RBP13.3□□□□□ -0.28
MRPL55-220ENST00000411464 SPIN3Q5JUX0 258 aa13.3□□□□□ -0.28
MRPL55-220ENST00000411464 NXNL2Q5VZ03 156 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms