RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 ERI1Q8IV48 349 aaKnown RBP1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 SLC15A3Q8IY34 581 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 ENTHD1Q8IYW4 607 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 PGAM4Q8N0Y7 254 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 OR8H3Q8N146 312 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 TPRX1Q8N7U7 411 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 ZNF454Q8N9F8 522 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 SLC37A3Q8NCC5 494 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 OR8B12Q8NGG6 310 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 OR4D6Q8NGJ1 314 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 OR6N2Q8NGY6 317 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 GNPDA2Q8TDQ7 276 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 THEM6Q8WUY1 208 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 ZNRF4Q8WWF5 429 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 STON2Q8WXE9 905 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 DCUN1D4Q92564 292 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 TOMM40LQ969M1 308 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 RNF166Q96A37 237 aaPredicted RBP1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 UBE2E2Q96LR5 201 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 OR4C12Q96R67 309 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 INTS14Q96SY0 518 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 CHCHD6Q9BRQ6 235 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 ABCG5Q9H222 651 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 OR51J1Q9H342 316 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 TUBA4BQ9H853 241 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 SEBOXQ9HB31 216 aaPredicted RBP1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 HES4Q9HCC6 221 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 LIN7CQ9NUP9 197 aaKnown RBP1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 MRGBPQ9NV56 204 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 GID8Q9NWU2 228 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 TAS2R3Q9NYW6 316 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 NDUFAF4Q9P032 175 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 DNAJB9Q9UBS3 223 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 ENPP5Q9UJA9 477 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 SLC7A11Q9UPY5 501 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 BAIAP2Q9UQB8 552 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 VSIG4Q9Y279 399 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 PIGLQ9Y2B2 252 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 AP3M1Q9Y2T2 418 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 AMMECR1Q9Y4X0 333 aaPredicted RBP1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 CDH10Q9Y6N8 788 aa1.84□□□□□ -2.11
RNU4-53P-201ENST00000410828 STARD9Q9P2P6 4700 aa1.84□□□□□ -2.12
RNU4-53P-201ENST00000410828 A0A0U1RQV5 110 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 KBTBD11-OT1A0A1B0GTJ5 212 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 TMEM269A0A1B0GVZ9 245 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 FAM230AA0A1W2PPH8 454 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 A0A1W2PPI3 338 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 PQLC2LA1A4F0 135 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 FAM172BPA6NC97 362 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 MAGEA13PA6NCF6 341 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 ACOD1A6NK06 481 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 FAM183AA6NL82 134 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 ZNF729A6NN14 1252 aaPredicted RBP1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 RIIAD1A6NNX1 92 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 C12orf77C9JDV5 145 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 LINC01619G3V211 115 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 H0Y980 276 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 J3QR06 171 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 DLGAP1O14490 977 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 NDUFAB1O14561 156 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 E2F6O75461 281 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 DHRS3O75911 302 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 INMTO95050 263 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 DIRAS1O95057 198 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 HAND1O96004 215 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 IFNGP01579 166 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 IGKV1D-33P01593 117 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 IGKV1-33P01594 117 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 IGHA1P01876 353 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 IGF1P05019 195 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 GYPBP06028 91 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 OR8U9P0C7N5 309 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 CLUP10909 449 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 FSTP19883 344 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 NFYBP25208 207 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 PSMB8P28062 276 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 GSTT1P30711 240 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 SOX6P35712 828 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 PTGFRP43088 359 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 GLIPR1P48060 266 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 GSSP48637 474 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 NUDT2P50583 147 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 RAB7AP51149 207 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 ZP1P60852 638 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 CDC42P60953 191 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 PITPNAQ00169 270 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 RUNX1Q01196 453 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 CFHR3Q02985 330 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 LIPEQ05469 1076 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 ZNF91Q05481 1191 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 SF3A3Q12874 501 aaKnown RBP eCLIP1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 BNIP1Q12981 228 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 KLF10Q13118 480 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 MADCAM1Q13477 382 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 CRMP1Q14194 572 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 EBI3Q14213 229 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 GALEQ14376 348 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 MAPRE2Q15555 327 aa1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 SAMD4BQ5PRF9 694 aaKnown RBP1.83□□□□□ -2.12
RNU4-53P-201ENST00000410828 CLVS2Q5SYC1 327 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms