RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 KLF18A0A0U1RQI7 1052 aa3.49□□□□□ -1.85
LSM5-205ENST00000409952 KRBOX1C9JBD0 128 aa3.49□□□□□ -1.85
LSM5-205ENST00000409952 E5RI56 91 aa3.49□□□□□ -1.85
LSM5-205ENST00000409952 M0R1X1 148 aa3.49□□□□□ -1.85
LSM5-205ENST00000409952 KRT75O95678 551 aa3.49□□□□□ -1.85
LSM5-205ENST00000409952 HLA-DRAP01903 254 aa3.49□□□□□ -1.85
LSM5-205ENST00000409952 SPNP16150 400 aa3.49□□□□□ -1.85
LSM5-205ENST00000409952 RPL12P30050 165 aaKnown RBP3.49□□□□□ -1.85
LSM5-205ENST00000409952 PYCR1P32322 319 aa3.49□□□□□ -1.85
LSM5-205ENST00000409952 PRSS3P35030 304 aa3.49□□□□□ -1.85
LSM5-205ENST00000409952 CXCL5P42830 114 aa3.49□□□□□ -1.85
LSM5-205ENST00000409952 NMUP48645 174 aa3.49□□□□□ -1.85
LSM5-205ENST00000409952 ACOT2P49753 483 aa3.49□□□□□ -1.85
LSM5-205ENST00000409952 CCL23P55773 120 aa3.49□□□□□ -1.85
LSM5-205ENST00000409952 LYZP61626 148 aa3.49□□□□□ -1.85
LSM5-205ENST00000409952 PPIDQ08752 370 aaKnown RBP3.49□□□□□ -1.85
LSM5-205ENST00000409952 SMAGPQ0VAQ4 97 aa3.49□□□□□ -1.85
LSM5-205ENST00000409952 ERCC8Q13216 396 aa3.49□□□□□ -1.85
LSM5-205ENST00000409952 ZNF235Q14590 738 aa3.49□□□□□ -1.85
LSM5-205ENST00000409952 SPIN3Q5JUX0 258 aa3.49□□□□□ -1.85
LSM5-205ENST00000409952 SAXO2Q658L1 398 aa3.49□□□□□ -1.85
LSM5-205ENST00000409952 TNFAIP8L2Q6P589 184 aaPredicted RBP3.49□□□□□ -1.85
LSM5-205ENST00000409952 SPNS3Q6ZMD2 512 aa3.49□□□□□ -1.85
LSM5-205ENST00000409952 IL34Q6ZMJ4 242 aa3.49□□□□□ -1.85
LSM5-205ENST00000409952 MDP1Q86V88 176 aa3.49□□□□□ -1.85
LSM5-205ENST00000409952 CALHM1Q8IU99 346 aa3.49□□□□□ -1.85
LSM5-205ENST00000409952 RIMKLAQ8IXN7 391 aa3.49□□□□□ -1.85
LSM5-205ENST00000409952 DRAM1Q8N682 238 aa3.49□□□□□ -1.85
LSM5-205ENST00000409952 SUMF2Q8NBJ7 301 aa3.49□□□□□ -1.85
LSM5-205ENST00000409952 SRSF12Q8WXF0 261 aaKnown RBP3.49□□□□□ -1.85
LSM5-205ENST00000409952 GHSRQ92847 366 aa3.49□□□□□ -1.85
LSM5-205ENST00000409952 OR4K3Q96R72 315 aa3.49□□□□□ -1.85
LSM5-205ENST00000409952 SLC25A31Q9H0C2 315 aa3.49□□□□□ -1.85
LSM5-205ENST00000409952 POMKQ9H5K3 350 aa3.49□□□□□ -1.85
LSM5-205ENST00000409952 VSIRQ9H7M9 311 aa3.49□□□□□ -1.85
LSM5-205ENST00000409952 MMP26Q9NRE1 261 aa3.49□□□□□ -1.85
LSM5-205ENST00000409952 MDFICQ9P1T7 246 aa3.49□□□□□ -1.85
LSM5-205ENST00000409952 ALG5Q9Y673 324 aa3.49□□□□□ -1.85
LSM5-205ENST00000409952 PRSS21Q9Y6M0 314 aa3.49□□□□□ -1.85
LSM5-205ENST00000409952 RB1CC1Q8TDY2 1594 aa3.48□□□□□ -1.85
LSM5-205ENST00000409952 ZFYVE9O95405 1425 aa3.48□□□□□ -1.85
LSM5-205ENST00000409952 FAM183AA6NL82 134 aa3.48□□□□□ -1.85
LSM5-205ENST00000409952 CYSRT1A8MQ03 144 aa3.48□□□□□ -1.85
LSM5-205ENST00000409952 NDUFC2-KCTD14E9PQ53 114 aa3.48□□□□□ -1.85
LSM5-205ENST00000409952 UPK1AO00322 258 aa3.48□□□□□ -1.85
LSM5-205ENST00000409952 CD5LO43866 347 aa3.48□□□□□ -1.85
LSM5-205ENST00000409952 SERPINB7O75635 380 aa3.48□□□□□ -1.85
LSM5-205ENST00000409952 INSP01308 110 aa3.48□□□□□ -1.85
LSM5-205ENST00000409952 M6PRP20645 277 aa3.48□□□□□ -1.85
LSM5-205ENST00000409952 DTYMKP23919 212 aa3.48□□□□□ -1.85
LSM5-205ENST00000409952 KIR3DL2P43630 455 aa3.48□□□□□ -1.85
LSM5-205ENST00000409952 OR4D2P58180 307 aa3.48□□□□□ -1.85
LSM5-205ENST00000409952 RANP62826 216 aaKnown RBP3.48□□□□□ -1.85
LSM5-205ENST00000409952 C15orf32Q32M92 178 aa3.48□□□□□ -1.85
LSM5-205ENST00000409952 MUC15Q8N387 334 aa3.48□□□□□ -1.85
LSM5-205ENST00000409952 LINC00337Q8N6G1 96 aa3.48□□□□□ -1.85
LSM5-205ENST00000409952 GPR32P1Q8NGA4 272 aa3.48□□□□□ -1.85
LSM5-205ENST00000409952 OR1J4Q8NGS1 313 aa3.48□□□□□ -1.85
LSM5-205ENST00000409952 TYMSOSQ8TAI1 123 aa3.48□□□□□ -1.85
LSM5-205ENST00000409952 TM4SF18Q96CE8 201 aa3.48□□□□□ -1.85
LSM5-205ENST00000409952 CHAC1Q9BUX1 264 aa3.48□□□□□ -1.85
LSM5-205ENST00000409952 MRPL20Q9BYC9 149 aaKnown RBP3.48□□□□□ -1.85
LSM5-205ENST00000409952 CDC42EP4Q9H3Q1 356 aaKnown RBP3.48□□□□□ -1.85
LSM5-205ENST00000409952 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.48□□□□□ -1.85
LSM5-205ENST00000409952 OPN4Q9UHM6 478 aa3.48□□□□□ -1.85
LSM5-205ENST00000409952 ADAMTSL3P82987 1691 aa3.48□□□□□ -1.85
LSM5-205ENST00000409952 HECW2Q9P2P5 1572 aa3.47□□□□□ -1.85
LSM5-205ENST00000409952 CCL15-CCL14A0A0B4J2E2 113 aa3.47□□□□□ -1.85
LSM5-205ENST00000409952 IGHV3-66A0A0C4DH42 116 aa3.47□□□□□ -1.85
LSM5-205ENST00000409952 LOC389332A0A1B0GUA5 103 aa3.47□□□□□ -1.85
LSM5-205ENST00000409952 PGPA6NDG6 321 aa3.47□□□□□ -1.85
LSM5-205ENST00000409952 INS-IGF2F8WCM5 200 aa3.47□□□□□ -1.85
LSM5-205ENST00000409952 H3BP45 60 aa3.47□□□□□ -1.85
LSM5-205ENST00000409952 KPNA3O00505 521 aaPredicted RBP3.47□□□□□ -1.85
LSM5-205ENST00000409952 LINC01565O15544 149 aa3.47□□□□□ -1.85
LSM5-205ENST00000409952 DENRO43583 198 aaKnown RBP3.47□□□□□ -1.85
LSM5-205ENST00000409952 FOXH1O75593 365 aa3.47□□□□□ -1.85
LSM5-205ENST00000409952 GATBO75879 557 aaKnown RBP3.47□□□□□ -1.85
LSM5-205ENST00000409952 SLC25A14O95258 325 aaPredicted RBP3.47□□□□□ -1.85
LSM5-205ENST00000409952 EPPINO95925 133 aa3.47□□□□□ -1.85
LSM5-205ENST00000409952 CA2P00918 260 aa3.47□□□□□ -1.85
LSM5-205ENST00000409952 MT-ND4P03905 459 aa3.47□□□□□ -1.85
LSM5-205ENST00000409952 CECR9P0C854 216 aa3.47□□□□□ -1.85
LSM5-205ENST00000409952 CTRLP40313 264 aa3.47□□□□□ -1.85
LSM5-205ENST00000409952 PMELP40967 661 aa3.47□□□□□ -1.85
LSM5-205ENST00000409952 UBE2AP49459 152 aa3.47□□□□□ -1.85
LSM5-205ENST00000409952 GNG10P50151 68 aa3.47□□□□□ -1.85
LSM5-205ENST00000409952 TCL1AP56279 114 aa3.47□□□□□ -1.85
LSM5-205ENST00000409952 GRB2P62993 217 aaKnown RBP3.47□□□□□ -1.85
LSM5-205ENST00000409952 CDK5Q00535 292 aa3.47□□□□□ -1.85
LSM5-205ENST00000409952 FMODQ06828 376 aa3.47□□□□□ -1.85
LSM5-205ENST00000409952 PPP1R1AQ13522 171 aa3.47□□□□□ -1.85
LSM5-205ENST00000409952 SPA17Q15506 151 aa3.47□□□□□ -1.85
LSM5-205ENST00000409952 CCL15Q16663 113 aa3.47□□□□□ -1.85
LSM5-205ENST00000409952 GUK1Q16774 197 aa3.47□□□□□ -1.85
LSM5-205ENST00000409952 ZNF404Q494X3 552 aa3.47□□□□□ -1.85
LSM5-205ENST00000409952 CCDC121Q6ZUS5 278 aa3.47□□□□□ -1.85
LSM5-205ENST00000409952 C6orf120Q7Z4R8 191 aa3.47□□□□□ -1.85
LSM5-205ENST00000409952 TGIF2LYQ8IUE0 185 aa3.47□□□□□ -1.85
LSM5-205ENST00000409952 SLC37A2Q8TED4 501 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms