RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 TNFSF10P50591 281 aa17.16■□□□□ 0.34
LIMS2-207ENST00000409808 C3AR1Q16581 482 aa17.16■□□□□ 0.34
LIMS2-207ENST00000409808 IAH1Q2TAA2 248 aaPredicted RBP17.16■□□□□ 0.34
LIMS2-207ENST00000409808 TMEM123Q8N131 208 aa17.16■□□□□ 0.34
LIMS2-207ENST00000409808 NPRL2Q8WTW4 380 aa17.16■□□□□ 0.34
LIMS2-207ENST00000409808 ZNF799Q96GE5 643 aa17.16■□□□□ 0.34
LIMS2-207ENST00000409808 Q96M66 194 aa17.16■□□□□ 0.34
LIMS2-207ENST00000409808 NRIP2Q9BQI9 281 aa17.16■□□□□ 0.34
LIMS2-207ENST00000409808 PARP11Q9NR21 331 aa17.16■□□□□ 0.34
LIMS2-207ENST00000409808 ZNF701Q9NV72 531 aaPredicted RBP17.16■□□□□ 0.34
LIMS2-207ENST00000409808 RCC2Q9P258 522 aaKnown RBP17.16■□□□□ 0.34
LIMS2-207ENST00000409808 SPENQ96T58 3664 aaKnown RBP17.16■□□□□ 0.34
LIMS2-207ENST00000409808 C5orf63A6NC05 138 aa17.15■□□□□ 0.34
LIMS2-207ENST00000409808 ZNF716A6NP11 495 aa17.15■□□□□ 0.34
LIMS2-207ENST00000409808 ZNF708P17019 499 aa17.15■□□□□ 0.34
LIMS2-207ENST00000409808 RPL12P30050 165 aaKnown RBP17.15■□□□□ 0.34
LIMS2-207ENST00000409808 CLDN18P56856 261 aa17.15■□□□□ 0.34
LIMS2-207ENST00000409808 FOXC1Q12948 553 aa17.15■□□□□ 0.34
LIMS2-207ENST00000409808 RSPO1Q2MKA7 263 aaPredicted RBP17.15■□□□□ 0.34
LIMS2-207ENST00000409808 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.15■□□□□ 0.34
LIMS2-207ENST00000409808 ZFP62Q8NB50 900 aaPredicted RBP17.15■□□□□ 0.34
LIMS2-207ENST00000409808 ABHD3Q8WU67 409 aa17.15■□□□□ 0.34
LIMS2-207ENST00000409808 ZNF2Q9BSG1 426 aaPredicted RBP17.15■□□□□ 0.34
LIMS2-207ENST00000409808 METTL9Q9H1A3 318 aa17.15■□□□□ 0.34
LIMS2-207ENST00000409808 HRH4Q9H3N8 390 aa17.15■□□□□ 0.34
LIMS2-207ENST00000409808 PLEKHA2Q9HB19 425 aa17.15■□□□□ 0.34
LIMS2-207ENST00000409808 ELL3Q9HB65 397 aaPredicted RBP17.15■□□□□ 0.34
LIMS2-207ENST00000409808 ZFP57Q9NU63 452 aa17.15■□□□□ 0.34
LIMS2-207ENST00000409808 TNRC6AQ8NDV7 1962 aaKnown RBP17.15■□□□□ 0.34
LIMS2-207ENST00000409808 BOD1L1Q8NFC6 3051 aa17.15■□□□□ 0.34
LIMS2-207ENST00000409808 CRYM-AS1A6NIL9 109 aa17.15■□□□□ 0.34
LIMS2-207ENST00000409808 ZNF891A8MT65 544 aaPredicted RBP17.15■□□□□ 0.34
LIMS2-207ENST00000409808 K7EPK0 472 aa17.15■□□□□ 0.34
LIMS2-207ENST00000409808 DNPH1O43598 174 aa17.15■□□□□ 0.34
LIMS2-207ENST00000409808 RPL7L1Q6DKI1 246 aaKnown RBP17.15■□□□□ 0.34
LIMS2-207ENST00000409808 FAM71E2Q8N5Q1 922 aa17.15■□□□□ 0.34
LIMS2-207ENST00000409808 ZNF837Q96EG3 531 aaPredicted RBP17.15■□□□□ 0.34
LIMS2-207ENST00000409808 ANXA10Q9UJ72 324 aa17.15■□□□□ 0.34
LIMS2-207ENST00000409808 KCNIP3Q9Y2W7 256 aa17.15■□□□□ 0.34
LIMS2-207ENST00000409808 NCOA6Q14686 2063 aaPredicted RBP17.15■□□□□ 0.34
LIMS2-207ENST00000409808 RNASEK-C17orf49H0YIS7 233 aa17.14■□□□□ 0.33
LIMS2-207ENST00000409808 DEDDO75618 318 aa17.14■□□□□ 0.33
LIMS2-207ENST00000409808 DTYMKP23919 212 aa17.14■□□□□ 0.33
LIMS2-207ENST00000409808 HOXA1P49639 335 aaPredicted RBP17.14■□□□□ 0.33
LIMS2-207ENST00000409808 FAM27BQ5VT28 67 aa17.14■□□□□ 0.33
LIMS2-207ENST00000409808 TMEM268Q5VZI3 342 aa17.14■□□□□ 0.33
LIMS2-207ENST00000409808 RPUSD3Q6P087 351 aaKnown RBP17.14■□□□□ 0.33
LIMS2-207ENST00000409808 TMEM88Q6PEY1 159 aa17.14■□□□□ 0.33
LIMS2-207ENST00000409808 MAFIPQ8WZ33 124 aa17.14■□□□□ 0.33
LIMS2-207ENST00000409808 RBM24Q9BX46 236 aaKnown RBP17.14■□□□□ 0.33
LIMS2-207ENST00000409808 KLK10O43240 276 aa17.14■□□□□ 0.33
LIMS2-207ENST00000409808 PRKACAP17612 351 aa17.14■□□□□ 0.33
LIMS2-207ENST00000409808 MRPS34P82930 218 aaKnown RBP17.14■□□□□ 0.33
LIMS2-207ENST00000409808 FAM3AP98173 230 aa17.14■□□□□ 0.33
LIMS2-207ENST00000409808 BTNL8Q6UX41 500 aa17.14■□□□□ 0.33
LIMS2-207ENST00000409808 SKA3Q8IX90 412 aa17.14■□□□□ 0.33
LIMS2-207ENST00000409808 SF3B5Q9BWJ5 86 aaKnown RBP17.14■□□□□ 0.33
LIMS2-207ENST00000409808 SAV1Q9H4B6 383 aaPredicted RBP17.14■□□□□ 0.33
LIMS2-207ENST00000409808 ACKR4Q9NPB9 350 aa17.14■□□□□ 0.33
LIMS2-207ENST00000409808 MCTS1Q9ULC4 181 aaKnown RBP17.14■□□□□ 0.33
LIMS2-207ENST00000409808 DMXL2Q8TDJ6 3036 aa17.13■□□□□ 0.33
LIMS2-207ENST00000409808 MED6O75586 246 aa17.13■□□□□ 0.33
LIMS2-207ENST00000409808 TMEM225BP0DP42 221 aa17.13■□□□□ 0.33
LIMS2-207ENST00000409808 F2RL1P55085 397 aa17.13■□□□□ 0.33
LIMS2-207ENST00000409808 SLC10A1Q14973 349 aa17.13■□□□□ 0.33
LIMS2-207ENST00000409808 C6orf201Q7Z4U5 140 aa17.13■□□□□ 0.33
LIMS2-207ENST00000409808 TMEM200AQ86VY9 491 aa17.13■□□□□ 0.33
LIMS2-207ENST00000409808 PIGTQ969N2 578 aa17.13■□□□□ 0.33
LIMS2-207ENST00000409808 PLEK2Q9NYT0 353 aa17.13■□□□□ 0.33
LIMS2-207ENST00000409808 FOXD3Q9UJU5 478 aaPredicted RBP17.13■□□□□ 0.33
LIMS2-207ENST00000409808 GFRA3O60609 400 aa17.13■□□□□ 0.33
LIMS2-207ENST00000409808 CD5P06127 495 aa17.13■□□□□ 0.33
LIMS2-207ENST00000409808 MUC1P15941 1255 aaPredicted RBP17.13■□□□□ 0.33
LIMS2-207ENST00000409808 CNN3Q15417 329 aaKnown RBP17.13■□□□□ 0.33
LIMS2-207ENST00000409808 ABLIM2Q6H8Q1 611 aa17.13■□□□□ 0.33
LIMS2-207ENST00000409808 DHRS11Q6UWP2 260 aa17.13■□□□□ 0.33
LIMS2-207ENST00000409808 TMEM178AQ8NBL3 297 aa17.13■□□□□ 0.33
LIMS2-207ENST00000409808 CPNE4Q96A23 557 aaPredicted RBP17.13■□□□□ 0.33
LIMS2-207ENST00000409808 SGK3Q96BR1 496 aa17.13■□□□□ 0.33
LIMS2-207ENST00000409808 NECAP2Q9NVZ3 263 aa17.13■□□□□ 0.33
LIMS2-207ENST00000409808 LINC01387J3KSC0 135 aa17.12■□□□□ 0.33
LIMS2-207ENST00000409808 GABRR1P24046 479 aa17.12■□□□□ 0.33
LIMS2-207ENST00000409808 FCGR2CP31995 323 aa17.12■□□□□ 0.33
LIMS2-207ENST00000409808 MTCP1P56278 107 aa17.12■□□□□ 0.33
LIMS2-207ENST00000409808 C20orf196Q8IYI0 205 aa17.12■□□□□ 0.33
LIMS2-207ENST00000409808 LRRC18Q8N456 261 aa17.12■□□□□ 0.33
LIMS2-207ENST00000409808 ULBP2Q9BZM5 246 aa17.12■□□□□ 0.33
LIMS2-207ENST00000409808 FBXO24O75426 580 aa17.12■□□□□ 0.33
LIMS2-207ENST00000409808 FCGR3AP08637 254 aa17.12■□□□□ 0.33
LIMS2-207ENST00000409808 OR5H8P0DN80 308 aa17.12■□□□□ 0.33
LIMS2-207ENST00000409808 LPAR6P43657 344 aa17.12■□□□□ 0.33
LIMS2-207ENST00000409808 RAB35Q15286 201 aa17.12■□□□□ 0.33
LIMS2-207ENST00000409808 GGNBP1Q5YKI7 109 aa17.12■□□□□ 0.33
LIMS2-207ENST00000409808 ASCL4Q6XD76 172 aa17.12■□□□□ 0.33
LIMS2-207ENST00000409808 CBLN2Q8IUK8 224 aa17.12■□□□□ 0.33
LIMS2-207ENST00000409808 CYYR1Q96J86 154 aa17.12■□□□□ 0.33
LIMS2-207ENST00000409808 RTTNQ86VV8 2226 aa17.11■□□□□ 0.33
LIMS2-207ENST00000409808 CEP295Q9C0D2 2601 aa17.11■□□□□ 0.33
LIMS2-207ENST00000409808 IGKV1D-8A0A087WSZ0 117 aa17.11■□□□□ 0.33
LIMS2-207ENST00000409808 CYTIPO60759 359 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms