RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 TRAV18A0A075B6X5 111 aa10.71□□□□□ -0.69
CHRNA1-205ENST00000409542 C17orf100A8MU93 164 aa10.71□□□□□ -0.69
CHRNA1-205ENST00000409542 AKAIN1P0CW23 69 aa10.71□□□□□ -0.69
CHRNA1-205ENST00000409542 PTHLHP12272 177 aa10.71□□□□□ -0.69
CHRNA1-205ENST00000409542 RAB6AP20340 208 aa10.71□□□□□ -0.69
CHRNA1-205ENST00000409542 HSD11B1P28845 292 aa10.71□□□□□ -0.69
CHRNA1-205ENST00000409542 RBMXP38159 391 aaKnown RBP10.71□□□□□ -0.69
CHRNA1-205ENST00000409542 CLRN1P58418 232 aa10.71□□□□□ -0.69
CHRNA1-205ENST00000409542 ZP1P60852 638 aa10.71□□□□□ -0.69
CHRNA1-205ENST00000409542 GALK2Q01415 458 aa10.71□□□□□ -0.69
CHRNA1-205ENST00000409542 RIPPLY1Q0D2K3 151 aa10.71□□□□□ -0.69
CHRNA1-205ENST00000409542 RBMS2Q15434 407 aaKnown RBP10.71□□□□□ -0.69
CHRNA1-205ENST00000409542 TUSC1Q2TAM9 212 aa10.71□□□□□ -0.69
CHRNA1-205ENST00000409542 PCGF3Q3KNV8 242 aa10.71□□□□□ -0.69
CHRNA1-205ENST00000409542 DCAF12L2Q5VW00 463 aa10.71□□□□□ -0.69
CHRNA1-205ENST00000409542 LRFN4Q6PJG9 635 aa10.71□□□□□ -0.69
CHRNA1-205ENST00000409542 SLC25A47Q6Q0C1 308 aa10.71□□□□□ -0.69
CHRNA1-205ENST00000409542 BPIFB2Q8N4F0 458 aa10.71□□□□□ -0.69
CHRNA1-205ENST00000409542 SIGLECL1Q8N7X8 197 aa10.71□□□□□ -0.69
CHRNA1-205ENST00000409542 PLPP7Q8NBV4 271 aa10.71□□□□□ -0.69
CHRNA1-205ENST00000409542 BEST4Q8NFU0 473 aa10.71□□□□□ -0.69
CHRNA1-205ENST00000409542 NANPQ8TBE9 248 aa10.71□□□□□ -0.69
CHRNA1-205ENST00000409542 GPX8Q8TED1 209 aa10.71□□□□□ -0.69
CHRNA1-205ENST00000409542 C1orf147Q96MC9 270 aaPredicted RBP10.71□□□□□ -0.69
CHRNA1-205ENST00000409542 FOXB1Q99853 325 aa10.71□□□□□ -0.69
CHRNA1-205ENST00000409542 ATG5Q9H1Y0 275 aa10.71□□□□□ -0.69
CHRNA1-205ENST00000409542 C7orf69Q9H7B7 122 aa10.71□□□□□ -0.69
CHRNA1-205ENST00000409542 ZNF107Q9UII5 783 aaPredicted RBP10.71□□□□□ -0.69
CHRNA1-205ENST00000409542 RHBDD3Q9Y3P4 386 aa10.71□□□□□ -0.69
CHRNA1-205ENST00000409542 WIPI2Q9Y4P8 454 aa10.71□□□□□ -0.69
CHRNA1-205ENST00000409542 DOK2O60496 412 aa10.7□□□□□ -0.7
CHRNA1-205ENST00000409542 KDM4BO94953 1096 aa10.7□□□□□ -0.7
CHRNA1-205ENST00000409542 ALX3O95076 343 aa10.7□□□□□ -0.7
CHRNA1-205ENST00000409542 ACSM4P0C7M7 580 aa10.7□□□□□ -0.7
CHRNA1-205ENST00000409542 RAD52P43351 418 aa10.7□□□□□ -0.7
CHRNA1-205ENST00000409542 ACTBP60709 375 aa10.7□□□□□ -0.7
CHRNA1-205ENST00000409542 RPS23P62266 143 aaKnown RBP10.7□□□□□ -0.7
CHRNA1-205ENST00000409542 FOXL1Q12952 345 aa10.7□□□□□ -0.7
CHRNA1-205ENST00000409542 HIST3H3Q16695 136 aa10.7□□□□□ -0.7
CHRNA1-205ENST00000409542 NKPD1Q17RQ9 610 aa10.7□□□□□ -0.7
CHRNA1-205ENST00000409542 GLYATL3Q5SZD4 288 aa10.7□□□□□ -0.7
CHRNA1-205ENST00000409542 ZNF626Q68DY1 528 aa10.7□□□□□ -0.7
CHRNA1-205ENST00000409542 RGS7BPQ6MZT1 257 aaPredicted RBP10.7□□□□□ -0.7
CHRNA1-205ENST00000409542 TREML4Q6UXN2 200 aa10.7□□□□□ -0.7
CHRNA1-205ENST00000409542 Q6ZTK2 550 aa10.7□□□□□ -0.7
CHRNA1-205ENST00000409542 CDH26Q8IXH8 852 aa10.7□□□□□ -0.7
CHRNA1-205ENST00000409542 OR4C16Q8NGL9 310 aa10.7□□□□□ -0.7
CHRNA1-205ENST00000409542 OR10S1Q8NGN2 331 aa10.7□□□□□ -0.7
CHRNA1-205ENST00000409542 OR6N1Q8NGY5 312 aa10.7□□□□□ -0.7
CHRNA1-205ENST00000409542 PBOV1Q9GZY1 135 aa10.7□□□□□ -0.7
CHRNA1-205ENST00000409542 CENPMQ9NSP4 180 aa10.7□□□□□ -0.7
CHRNA1-205ENST00000409542 IGLV3-9A0A075B6K5 115 aa10.69□□□□□ -0.7
CHRNA1-205ENST00000409542 IGHV1-69-2A0A0G2JMI3 117 aa10.69□□□□□ -0.7
CHRNA1-205ENST00000409542 A0A1W2PPL8 197 aa10.69□□□□□ -0.7
CHRNA1-205ENST00000409542 ANKRD34BA5PLL1 514 aa10.69□□□□□ -0.7
CHRNA1-205ENST00000409542 ZNF878C9JN71 531 aa10.69□□□□□ -0.7
CHRNA1-205ENST00000409542 J3QLI3 93 aa10.69□□□□□ -0.7
CHRNA1-205ENST00000409542 P2RY10O00398 339 aa10.69□□□□□ -0.7
CHRNA1-205ENST00000409542 CREBL2O60519 120 aaPredicted RBP10.69□□□□□ -0.7
CHRNA1-205ENST00000409542 SNAPC5O75971 98 aa10.69□□□□□ -0.7
CHRNA1-205ENST00000409542 TTRP02766 147 aa10.69□□□□□ -0.7
CHRNA1-205ENST00000409542 SERPINA5P05154 406 aa10.69□□□□□ -0.7
CHRNA1-205ENST00000409542 LPLP06858 475 aa10.69□□□□□ -0.7
CHRNA1-205ENST00000409542 MELTFP08582 738 aa10.69□□□□□ -0.7
CHRNA1-205ENST00000409542 NR2C1P13056 603 aa10.69□□□□□ -0.7
CHRNA1-205ENST00000409542 PSMA6P60900 246 aaKnown RBP10.69□□□□□ -0.7
CHRNA1-205ENST00000409542 LCN2P80188 198 aa10.69□□□□□ -0.7
CHRNA1-205ENST00000409542 CORO6Q6QEF8 472 aa10.69□□□□□ -0.7
CHRNA1-205ENST00000409542 NLRC3Q7RTR2 1065 aa10.69□□□□□ -0.7
CHRNA1-205ENST00000409542 TEX29Q8N6K0 151 aa10.69□□□□□ -0.7
CHRNA1-205ENST00000409542 TMEM229BQ8NBD8 167 aa10.69□□□□□ -0.7
CHRNA1-205ENST00000409542 OR11H4Q8NGC9 324 aa10.69□□□□□ -0.7
CHRNA1-205ENST00000409542 OR51A2Q8NGJ7 313 aa10.69□□□□□ -0.7
CHRNA1-205ENST00000409542 SEC22CQ9BRL7 303 aa10.69□□□□□ -0.7
CHRNA1-205ENST00000409542 ULBP2Q9BZM5 246 aa10.69□□□□□ -0.7
CHRNA1-205ENST00000409542 UNKLQ9H9P5 680 aaKnown RBP10.69□□□□□ -0.7
CHRNA1-205ENST00000409542 BEX1Q9HBH7 125 aa10.69□□□□□ -0.7
CHRNA1-205ENST00000409542 CGGBP1Q9UFW8 167 aaPredicted RBP10.69□□□□□ -0.7
CHRNA1-205ENST00000409542 LHFPL6Q9Y693 200 aa10.69□□□□□ -0.7
CHRNA1-205ENST00000409542 GIPP09681 153 aaPredicted RBP10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 GTF2F2P13984 249 aa10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 ZNF250P15622 560 aa10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 ZFP36P26651 326 aaKnown RBP10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 BDKRB2P30411 391 aa10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 HTR2BP41595 481 aa10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 TAS2R19P59542 299 aa10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 DHODHQ02127 395 aa10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 GUCA2AQ02747 115 aa10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 IKZF1Q13422 519 aa10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 MIDNQ504T8 468 aa10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 RAB12Q6IQ22 244 aa10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 FAAP20Q6NZ36 180 aa10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 ZNF529Q6P280 563 aa10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 SLC36A1Q7Z2H8 476 aa10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 BCL6BQ8N143 479 aaPredicted RBP10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 OR2AJ1Q8NGZ0 328 aa10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 SNAPC3Q92966 411 aa10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 RAB39BQ96DA2 213 aa10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 SEH1LQ96EE3 360 aa10.68□□□□□ -0.7
CHRNA1-205ENST00000409542 ZNF48Q96MX3 618 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms