RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 SLC5A7Q9GZV3 580 aa11.68□□□□□ -0.54
COL6A2-204ENST00000409416 MEMO1Q9Y316 297 aa11.68□□□□□ -0.54
COL6A2-204ENST00000409416 M0R036 132 aa11.67□□□□□ -0.54
COL6A2-204ENST00000409416 WRBO00258 174 aa11.67□□□□□ -0.54
COL6A2-204ENST00000409416 NME2P1O60361 137 aa11.67□□□□□ -0.54
COL6A2-204ENST00000409416 C1QL1O75973 258 aa11.67□□□□□ -0.54
COL6A2-204ENST00000409416 IFNA21P01568 189 aa11.67□□□□□ -0.54
COL6A2-204ENST00000409416 IGLV3-19P01714 112 aa11.67□□□□□ -0.54
COL6A2-204ENST00000409416 RAB13P51153 203 aa11.67□□□□□ -0.54
COL6A2-204ENST00000409416 PABPC1L2AQ5JQF8 200 aa11.67□□□□□ -0.54
COL6A2-204ENST00000409416 RBMS3Q6XE24 437 aaKnown RBP11.67□□□□□ -0.54
COL6A2-204ENST00000409416 BEND4Q6ZU67 534 aa11.67□□□□□ -0.54
COL6A2-204ENST00000409416 TIPARPQ7Z3E1 657 aaKnown RBP11.67□□□□□ -0.54
COL6A2-204ENST00000409416 TREM2Q9NZC2 230 aa11.67□□□□□ -0.54
COL6A2-204ENST00000409416 DNAJB11Q9UBS4 358 aa11.67□□□□□ -0.54
COL6A2-204ENST00000409416 PURGQ9UJV8 347 aaKnown RBP11.67□□□□□ -0.54
COL6A2-204ENST00000409416 SLC7A11Q9UPY5 501 aa11.67□□□□□ -0.54
COL6A2-204ENST00000409416 PINLYPA6NC86 204 aa11.67□□□□□ -0.54
COL6A2-204ENST00000409416 ACKR3P25106 362 aa11.67□□□□□ -0.54
COL6A2-204ENST00000409416 FCGR2CP31995 323 aa11.67□□□□□ -0.54
COL6A2-204ENST00000409416 DEFA6Q01524 100 aa11.67□□□□□ -0.54
COL6A2-204ENST00000409416 PCOLCEQ15113 449 aa11.67□□□□□ -0.54
COL6A2-204ENST00000409416 MYOZ1Q9NP98 299 aaPredicted RBP11.67□□□□□ -0.54
COL6A2-204ENST00000409416 UBE2J1Q9Y385 318 aaPredicted RBP11.67□□□□□ -0.54
COL6A2-204ENST00000409416 CHCHD2Q9Y6H1 151 aaPredicted RBP11.67□□□□□ -0.54
COL6A2-204ENST00000409416 COL12A1Q99715 3063 aa11.67□□□□□ -0.54
COL6A2-204ENST00000409416 ONECUT2O95948 504 aa11.67□□□□□ -0.54
COL6A2-204ENST00000409416 PTAFRP25105 342 aa11.67□□□□□ -0.54
COL6A2-204ENST00000409416 G0S2P27469 103 aa11.67□□□□□ -0.54
COL6A2-204ENST00000409416 CFPP27918 469 aa11.67□□□□□ -0.54
COL6A2-204ENST00000409416 ARF1P84077 181 aaKnown RBP11.67□□□□□ -0.54
COL6A2-204ENST00000409416 RIPPLY1Q0D2K3 151 aa11.67□□□□□ -0.54
COL6A2-204ENST00000409416 ZNF124Q15973 351 aa11.67□□□□□ -0.54
COL6A2-204ENST00000409416 SSX9Q7RTT3 188 aa11.67□□□□□ -0.54
COL6A2-204ENST00000409416 SGPP2Q8IWX5 399 aa11.67□□□□□ -0.54
COL6A2-204ENST00000409416 C2orf50Q96LR7 162 aa11.67□□□□□ -0.54
COL6A2-204ENST00000409416 SULT4A1Q9BR01 284 aa11.67□□□□□ -0.54
COL6A2-204ENST00000409416 GSN-AS1Q9NRJ2 163 aa11.67□□□□□ -0.54
COL6A2-204ENST00000409416 TCFL5Q9UL49 500 aa11.67□□□□□ -0.54
COL6A2-204ENST00000409416 RNF150Q9ULK6 438 aa11.67□□□□□ -0.54
COL6A2-204ENST00000409416 SNAPINO95295 136 aa11.66□□□□□ -0.54
COL6A2-204ENST00000409416 PET100P0DJ07 73 aa11.66□□□□□ -0.54
COL6A2-204ENST00000409416 MUC1P15941 1255 aaPredicted RBP11.66□□□□□ -0.54
COL6A2-204ENST00000409416 HIKESHIQ53FT3 197 aa11.66□□□□□ -0.54
COL6A2-204ENST00000409416 PRSS54Q6PEW0 395 aa11.66□□□□□ -0.54
COL6A2-204ENST00000409416 ARRDC1Q8N5I2 433 aa11.66□□□□□ -0.54
COL6A2-204ENST00000409416 FOXB1Q99853 325 aa11.66□□□□□ -0.54
COL6A2-204ENST00000409416 RTBDNQ9BSG5 229 aaPredicted RBP11.66□□□□□ -0.54
COL6A2-204ENST00000409416 EIF5A2Q9GZV4 153 aaKnown RBP11.66□□□□□ -0.54
COL6A2-204ENST00000409416 RPS10P5Q9NQ39 176 aa11.66□□□□□ -0.54
COL6A2-204ENST00000409416 UQCC1Q9NVA1 299 aa11.66□□□□□ -0.54
COL6A2-204ENST00000409416 FOXJ2Q9P0K8 574 aa11.66□□□□□ -0.54
COL6A2-204ENST00000409416 ZNF107Q9UII5 783 aaPredicted RBP11.66□□□□□ -0.54
COL6A2-204ENST00000409416 INTS1Q8N201 2190 aaKnown RBP11.66□□□□□ -0.54
COL6A2-204ENST00000409416 SYNGR4O95473 234 aa11.66□□□□□ -0.54
COL6A2-204ENST00000409416 NRASP01111 189 aa11.66□□□□□ -0.54
COL6A2-204ENST00000409416 NGFP01138 241 aa11.66□□□□□ -0.54
COL6A2-204ENST00000409416 OR5H8P0DN80 308 aa11.66□□□□□ -0.54
COL6A2-204ENST00000409416 FPR2P25090 351 aa11.66□□□□□ -0.54
COL6A2-204ENST00000409416 NPBWR2P48146 333 aa11.66□□□□□ -0.54
COL6A2-204ENST00000409416 DUSP3P51452 185 aaPredicted RBP11.66□□□□□ -0.54
COL6A2-204ENST00000409416 P2RY4P51582 365 aa11.66□□□□□ -0.54
COL6A2-204ENST00000409416 TAS2R46P59540 309 aa11.66□□□□□ -0.54
COL6A2-204ENST00000409416 SUPT4H1P63272 117 aaKnown RBP11.66□□□□□ -0.54
COL6A2-204ENST00000409416 C6orf15Q6UXA7 325 aaPredicted RBP11.66□□□□□ -0.54
COL6A2-204ENST00000409416 Q6ZRG5 221 aa11.66□□□□□ -0.54
COL6A2-204ENST00000409416 OR56B2PQ8NGI1 322 aa11.66□□□□□ -0.54
COL6A2-204ENST00000409416 OR4A4PQ8NGN8 299 aa11.66□□□□□ -0.54
COL6A2-204ENST00000409416 AKR1E2Q96JD6 320 aa11.66□□□□□ -0.54
COL6A2-204ENST00000409416 PECRQ9BY49 303 aa11.66□□□□□ -0.54
COL6A2-204ENST00000409416 MRPL13Q9BYD1 178 aaKnown RBP11.66□□□□□ -0.54
COL6A2-204ENST00000409416 NMES1Q9C002 83 aa11.66□□□□□ -0.54
COL6A2-204ENST00000409416 PILRBQ9UKJ0 227 aa11.66□□□□□ -0.54
COL6A2-204ENST00000409416 RFNGQ9Y644 331 aa11.66□□□□□ -0.54
COL6A2-204ENST00000409416 CER1O95813 267 aa11.66□□□□□ -0.54
COL6A2-204ENST00000409416 IFNA2P01563 188 aa11.66□□□□□ -0.54
COL6A2-204ENST00000409416 SNRNP70P08621 437 aaKnown RBP11.66□□□□□ -0.54
COL6A2-204ENST00000409416 SFTA3P0C7M3 94 aa11.66□□□□□ -0.54
COL6A2-204ENST00000409416 TBPP20226 339 aa11.66□□□□□ -0.54
COL6A2-204ENST00000409416 RPL12P30050 165 aaKnown RBP11.66□□□□□ -0.54
COL6A2-204ENST00000409416 LPAR6P43657 344 aa11.66□□□□□ -0.54
COL6A2-204ENST00000409416 STARD6P59095 220 aa11.66□□□□□ -0.54
COL6A2-204ENST00000409416 OR2T2Q6IF00 324 aa11.66□□□□□ -0.54
COL6A2-204ENST00000409416 FAHD2BQ6P2I3 314 aaPredicted RBP11.66□□□□□ -0.54
COL6A2-204ENST00000409416 OR5T1Q8NG75 326 aa11.66□□□□□ -0.54
COL6A2-204ENST00000409416 FAHD2AQ96GK7 314 aa11.66□□□□□ -0.54
COL6A2-204ENST00000409416 SIGLEC12Q96PQ1 595 aa11.66□□□□□ -0.54
COL6A2-204ENST00000409416 DEPPQ9NTK1 212 aa11.66□□□□□ -0.54
COL6A2-204ENST00000409416 SPAARA0A1B0GVQ0 90 aa11.65□□□□□ -0.54
COL6A2-204ENST00000409416 DHRS7CA6NNS2 312 aa11.65□□□□□ -0.54
COL6A2-204ENST00000409416 HFEQ30201 348 aa11.65□□□□□ -0.54
COL6A2-204ENST00000409416 ACTBL2Q562R1 376 aa11.65□□□□□ -0.54
COL6A2-204ENST00000409416 KRBOX4Q5JUW0 171 aa11.65□□□□□ -0.54
COL6A2-204ENST00000409416 ZNF565Q8N9K5 539 aa11.65□□□□□ -0.54
COL6A2-204ENST00000409416 MRPL24Q96A35 216 aaKnown RBP11.65□□□□□ -0.54
COL6A2-204ENST00000409416 S100PBPQ96BU1 408 aa11.65□□□□□ -0.54
COL6A2-204ENST00000409416 RAB18Q9NP72 206 aa11.65□□□□□ -0.54
COL6A2-204ENST00000409416 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.65□□□□□ -0.54
COL6A2-204ENST00000409416 A0A1B0GV90 55 aa11.65□□□□□ -0.54
COL6A2-204ENST00000409416 LYZL6O75951 148 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms