RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 KLK3P07288 261 aaPredicted RBP7.27□□□□□ -1.25
SNX13-201ENST00000409076 APOBEC1P41238 236 aaKnown RBP7.27□□□□□ -1.25
SNX13-201ENST00000409076 GSK3AP49840 483 aa7.27□□□□□ -1.25
SNX13-201ENST00000409076 TAS2R46P59540 309 aa7.27□□□□□ -1.25
SNX13-201ENST00000409076 RAB2AP61019 212 aa7.27□□□□□ -1.25
SNX13-201ENST00000409076 EIF5AP63241 154 aaKnown RBP7.27□□□□□ -1.25
SNX13-201ENST00000409076 ADIRFQ15847 76 aa7.27□□□□□ -1.25
SNX13-201ENST00000409076 ACER2Q5QJU3 275 aa7.27□□□□□ -1.25
SNX13-201ENST00000409076 ZDHHC22Q8N966 263 aa7.27□□□□□ -1.25
SNX13-201ENST00000409076 RPS4Y2Q8TD47 263 aa7.27□□□□□ -1.25
SNX13-201ENST00000409076 OCSTAMPQ9BR26 566 aa7.27□□□□□ -1.25
SNX13-201ENST00000409076 SLC26A1Q9H2B4 701 aa7.27□□□□□ -1.25
SNX13-201ENST00000409076 A0A0G2JMM0 328 aa7.27□□□□□ -1.25
SNX13-201ENST00000409076 A0A1W2PPB8 328 aa7.27□□□□□ -1.25
SNX13-201ENST00000409076 A0A1W2PRS3 328 aa7.27□□□□□ -1.25
SNX13-201ENST00000409076 C5orf49A4QMS7 147 aa7.27□□□□□ -1.25
SNX13-201ENST00000409076 CXorf65A6NEN9 183 aa7.27□□□□□ -1.25
SNX13-201ENST00000409076 ANKUB1A6NFN9 424 aa7.27□□□□□ -1.25
SNX13-201ENST00000409076 KIR3DP1A8MWS1 328 aa7.27□□□□□ -1.25
SNX13-201ENST00000409076 CD74P04233 296 aa7.27□□□□□ -1.25
SNX13-201ENST00000409076 CHRM2P08172 466 aa7.27□□□□□ -1.25
SNX13-201ENST00000409076 FPR2P25090 351 aa7.27□□□□□ -1.25
SNX13-201ENST00000409076 ALDH3B1P43353 468 aa7.27□□□□□ -1.25
SNX13-201ENST00000409076 SULT1A1P50225 295 aa7.27□□□□□ -1.25
SNX13-201ENST00000409076 MALLQ13021 153 aa7.27□□□□□ -1.25
SNX13-201ENST00000409076 SSX9Q7RTT3 188 aa7.27□□□□□ -1.25
SNX13-201ENST00000409076 SLC35G3Q8N808 338 aa7.27□□□□□ -1.25
SNX13-201ENST00000409076 THRSPQ92748 146 aa7.27□□□□□ -1.25
SNX13-201ENST00000409076 SPTSSAQ969W0 71 aa7.27□□□□□ -1.25
SNX13-201ENST00000409076 CCDC74BQ96LY2 380 aa7.27□□□□□ -1.25
SNX13-201ENST00000409076 RCC2Q9P258 522 aaKnown RBP7.27□□□□□ -1.25
SNX13-201ENST00000409076 CCDC187A0A096LP49 1063 aa7.27□□□□□ -1.25
SNX13-201ENST00000409076 TUBAL3A6NHL2 446 aa7.27□□□□□ -1.25
SNX13-201ENST00000409076 CEBPZOSA8MTT3 80 aa7.27□□□□□ -1.25
SNX13-201ENST00000409076 C5orf67F2Z3F1 127 aa7.27□□□□□ -1.25
SNX13-201ENST00000409076 SIRPB1O00241 398 aa7.27□□□□□ -1.25
SNX13-201ENST00000409076 DHHO43323 396 aa7.27□□□□□ -1.25
SNX13-201ENST00000409076 NRASP01111 189 aa7.27□□□□□ -1.25
SNX13-201ENST00000409076 METTL15P1P0C7V9 234 aa7.27□□□□□ -1.25
SNX13-201ENST00000409076 PRB4P10163 310 aaPredicted RBP7.27□□□□□ -1.25
SNX13-201ENST00000409076 IGFBP3P17936 291 aaPredicted RBP7.27□□□□□ -1.25
SNX13-201ENST00000409076 DCAF7P61962 342 aa7.27□□□□□ -1.25
SNX13-201ENST00000409076 ROM1Q03395 351 aa7.27□□□□□ -1.25
SNX13-201ENST00000409076 SPANXN5Q5MJ07 72 aa7.27□□□□□ -1.25
SNX13-201ENST00000409076 PRR31Q5SQ13 230 aa7.27□□□□□ -1.25
SNX13-201ENST00000409076 THEM4Q5T1C6 240 aa7.27□□□□□ -1.25
SNX13-201ENST00000409076 LILRB2Q8N423 598 aa7.27□□□□□ -1.25
SNX13-201ENST00000409076 IFI44Q8TCB0 444 aa7.27□□□□□ -1.25
SNX13-201ENST00000409076 HIST1H2BAQ96A08 127 aa7.27□□□□□ -1.25
SNX13-201ENST00000409076 LYZL4Q96KX0 146 aa7.27□□□□□ -1.25
SNX13-201ENST00000409076 RSG1Q9BU20 258 aa7.27□□□□□ -1.25
SNX13-201ENST00000409076 BARX1Q9HBU1 254 aaPredicted RBP7.27□□□□□ -1.25
SNX13-201ENST00000409076 CYTL1Q9NRR1 136 aa7.27□□□□□ -1.25
SNX13-201ENST00000409076 UFSP2Q9NUQ7 469 aa7.27□□□□□ -1.25
SNX13-201ENST00000409076 TGIF2-C20orf24A0A0A6YYL0 155 aa7.26□□□□□ -1.25
SNX13-201ENST00000409076 EGR1P18146 543 aa7.26□□□□□ -1.25
SNX13-201ENST00000409076 NKX2-1P43699 371 aaPredicted RBP7.26□□□□□ -1.25
SNX13-201ENST00000409076 GABRA4P48169 554 aa7.26□□□□□ -1.25
SNX13-201ENST00000409076 MMP16P51512 607 aa7.26□□□□□ -1.25
SNX13-201ENST00000409076 ALKBH6Q3KRA9 238 aa7.26□□□□□ -1.25
SNX13-201ENST00000409076 COL13A1Q5TAT6 717 aaPredicted RBP7.26□□□□□ -1.25
SNX13-201ENST00000409076 MCEMP1Q8IX19 187 aa7.26□□□□□ -1.25
SNX13-201ENST00000409076 GJC3Q8NFK1 279 aa7.26□□□□□ -1.25
SNX13-201ENST00000409076 OR5L2Q8NGL0 311 aa7.26□□□□□ -1.25
SNX13-201ENST00000409076 WFDC1Q9HC57 220 aa7.26□□□□□ -1.25
SNX13-201ENST00000409076 WASF3Q9UPY6 502 aa7.26□□□□□ -1.25
SNX13-201ENST00000409076 TIMM8BQ9Y5J9 83 aaPredicted RBP7.26□□□□□ -1.25
SNX13-201ENST00000409076 COL6A6A6NMZ7 2263 aa7.26□□□□□ -1.25
SNX13-201ENST00000409076 CFAP47Q6ZTR5 3102 aa7.26□□□□□ -1.25
SNX13-201ENST00000409076 TP53I11O14683 189 aa7.26□□□□□ -1.25
SNX13-201ENST00000409076 PHOX2AO14813 284 aa7.26□□□□□ -1.25
SNX13-201ENST00000409076 ST8SIA3O43173 380 aa7.26□□□□□ -1.25
SNX13-201ENST00000409076 CHATP28329 748 aa7.26□□□□□ -1.25
SNX13-201ENST00000409076 LTBRP36941 435 aa7.26□□□□□ -1.25
SNX13-201ENST00000409076 DHODHQ02127 395 aa7.26□□□□□ -1.25
SNX13-201ENST00000409076 C1orf53Q5VUE5 145 aa7.26□□□□□ -1.25
SNX13-201ENST00000409076 LGI3Q8N145 548 aa7.26□□□□□ -1.25
SNX13-201ENST00000409076 TPRX1Q8N7U7 411 aa7.26□□□□□ -1.25
SNX13-201ENST00000409076 WDSUB1Q8N9V3 476 aa7.26□□□□□ -1.25
SNX13-201ENST00000409076 TCTEX1D2Q8WW35 142 aa7.26□□□□□ -1.25
SNX13-201ENST00000409076 FRZBQ92765 325 aa7.26□□□□□ -1.25
SNX13-201ENST00000409076 CCL28Q9NRJ3 127 aa7.26□□□□□ -1.25
SNX13-201ENST00000409076 SLC2A9Q9NRM0 540 aa7.26□□□□□ -1.25
SNX13-201ENST00000409076 SRPK3Q9UPE1 567 aa7.26□□□□□ -1.25
SNX13-201ENST00000409076 DEFB108AA8MXU0 73 aa7.26□□□□□ -1.25
SNX13-201ENST00000409076 CD8AP01732 235 aa7.26□□□□□ -1.25
SNX13-201ENST00000409076 SCTP09683 121 aa7.26□□□□□ -1.25
SNX13-201ENST00000409076 H2AFB1P0C5Y9 115 aa7.26□□□□□ -1.25
SNX13-201ENST00000409076 UBE2G2P60604 165 aa7.26□□□□□ -1.25
SNX13-201ENST00000409076 HABP2Q14520 560 aaPredicted RBP7.26□□□□□ -1.25
SNX13-201ENST00000409076 ZNF528Q3MIS6 628 aa7.26□□□□□ -1.25
SNX13-201ENST00000409076 AADACL3Q5VUY0 350 aa7.26□□□□□ -1.25
SNX13-201ENST00000409076 CYB561D1Q8N8Q1 229 aa7.26□□□□□ -1.25
SNX13-201ENST00000409076 RFESDQ8TAC1 157 aa7.26□□□□□ -1.25
SNX13-201ENST00000409076 POC1BQ8TC44 478 aa7.26□□□□□ -1.25
SNX13-201ENST00000409076 EMG1Q92979 244 aaKnown RBP7.26□□□□□ -1.25
SNX13-201ENST00000409076 SNX22Q96L94 193 aa7.26□□□□□ -1.25
SNX13-201ENST00000409076 HIST1H2AAQ96QV6 131 aa7.26□□□□□ -1.25
SNX13-201ENST00000409076 HES7Q9BYE0 225 aa7.26□□□□□ -1.25
SNX13-201ENST00000409076 LIME1Q9H400 295 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms