RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 PIFOQ8TCI5 191 aa12.45□□□□□ -0.42
TPM1-207ENST00000403994 SPSB1Q96BD6 273 aa12.45□□□□□ -0.42
TPM1-207ENST00000403994 FGGYQ96C11 551 aa12.45□□□□□ -0.42
TPM1-207ENST00000403994 FOXRED1Q96CU9 486 aaPredicted RBP12.45□□□□□ -0.42
TPM1-207ENST00000403994 SNX22Q96L94 193 aa12.45□□□□□ -0.42
TPM1-207ENST00000403994 ZNF714Q96N38 554 aa12.45□□□□□ -0.42
TPM1-207ENST00000403994 OPALINQ96PE5 141 aa12.45□□□□□ -0.42
TPM1-207ENST00000403994 CHST6Q9GZX3 395 aa12.45□□□□□ -0.42
TPM1-207ENST00000403994 RAB18Q9NP72 206 aa12.45□□□□□ -0.42
TPM1-207ENST00000403994 FBLN5Q9UBX5 448 aa12.45□□□□□ -0.42
TPM1-207ENST00000403994 HHLA2Q9UM44 414 aa12.45□□□□□ -0.42
TPM1-207ENST00000403994 EXOGQ9Y2C4 368 aaKnown RBP12.45□□□□□ -0.42
TPM1-207ENST00000403994 SIGLEC9Q9Y336 463 aa12.45□□□□□ -0.42
TPM1-207ENST00000403994 GMPPBQ9Y5P6 360 aa12.45□□□□□ -0.42
TPM1-207ENST00000403994 FAM90A8PA6NJQ4 464 aa12.44□□□□□ -0.42
TPM1-207ENST00000403994 SNTNA6NMZ2 147 aa12.44□□□□□ -0.42
TPM1-207ENST00000403994 OR4C45A6NMZ5 311 aa12.44□□□□□ -0.42
TPM1-207ENST00000403994 J3QLW9 94 aa12.44□□□□□ -0.42
TPM1-207ENST00000403994 PSPNO60542 156 aa12.44□□□□□ -0.42
TPM1-207ENST00000403994 CYB5AP00167 134 aa12.44□□□□□ -0.42
TPM1-207ENST00000403994 ARG1P05089 322 aa12.44□□□□□ -0.42
TPM1-207ENST00000403994 DBTP11182 482 aaKnown RBP12.44□□□□□ -0.42
TPM1-207ENST00000403994 ZNF19P17023 458 aa12.44□□□□□ -0.42
TPM1-207ENST00000403994 PRKACAP17612 351 aa12.44□□□□□ -0.42
TPM1-207ENST00000403994 PRKACBP22694 351 aa12.44□□□□□ -0.42
TPM1-207ENST00000403994 GABRR1P24046 479 aa12.44□□□□□ -0.42
TPM1-207ENST00000403994 DUSP1P28562 367 aa12.44□□□□□ -0.42
TPM1-207ENST00000403994 EFNB2P52799 333 aa12.44□□□□□ -0.42
TPM1-207ENST00000403994 SNU13P55769 128 aaKnown RBP12.44□□□□□ -0.42
TPM1-207ENST00000403994 DEFA6Q01524 100 aa12.44□□□□□ -0.42
TPM1-207ENST00000403994 MEF2CQ06413 473 aaPredicted RBP12.44□□□□□ -0.42
TPM1-207ENST00000403994 ZNF146Q15072 292 aa12.44□□□□□ -0.42
TPM1-207ENST00000403994 GRK1Q15835 563 aa12.44□□□□□ -0.42
TPM1-207ENST00000403994 PLA1AQ53H76 456 aa12.44□□□□□ -0.42
TPM1-207ENST00000403994 LDLRAD2Q5SZI1 272 aa12.44□□□□□ -0.42
TPM1-207ENST00000403994 LIAT1Q6ZQX7 453 aa12.44□□□□□ -0.42
TPM1-207ENST00000403994 FAM58AQ8N1B3 248 aa12.44□□□□□ -0.42
TPM1-207ENST00000403994 TPRX1Q8N7U7 411 aa12.44□□□□□ -0.42
TPM1-207ENST00000403994 OR52N4Q8NGI2 321 aa12.44□□□□□ -0.42
TPM1-207ENST00000403994 OR13C3Q8NGS6 347 aa12.44□□□□□ -0.42
TPM1-207ENST00000403994 OR13C9Q8NGT0 318 aa12.44□□□□□ -0.42
TPM1-207ENST00000403994 OR13D1Q8NGV5 346 aa12.44□□□□□ -0.42
TPM1-207ENST00000403994 RFT1Q96AA3 541 aa12.44□□□□□ -0.42
TPM1-207ENST00000403994 ALG8Q9BVK2 526 aa12.44□□□□□ -0.42
TPM1-207ENST00000403994 RANBP3Q9H6Z4 567 aaPredicted RBP12.44□□□□□ -0.42
TPM1-207ENST00000403994 SEBOXQ9HB31 216 aaPredicted RBP12.44□□□□□ -0.42
TPM1-207ENST00000403994 TBL2Q9Y4P3 447 aaKnown RBP12.44□□□□□ -0.42
TPM1-207ENST00000403994 LINC00312Q9Y6C7 94 aa12.44□□□□□ -0.42
TPM1-207ENST00000403994 IGKV1-12A0A0C4DH73 117 aa12.43□□□□□ -0.42
TPM1-207ENST00000403994 hADV38S2A0JD32 116 aa12.43□□□□□ -0.42
TPM1-207ENST00000403994 IGKV1D-12P01611 117 aa12.43□□□□□ -0.42
TPM1-207ENST00000403994 CALCBP10092 127 aa12.43□□□□□ -0.42
TPM1-207ENST00000403994 OR3A1P47881 315 aa12.43□□□□□ -0.42
TPM1-207ENST00000403994 PDZK1IP1Q13113 114 aa12.43□□□□□ -0.42
TPM1-207ENST00000403994 GALEQ14376 348 aa12.43□□□□□ -0.42
TPM1-207ENST00000403994 C2orf68Q2NKX9 166 aa12.43□□□□□ -0.42
TPM1-207ENST00000403994 RNF144BQ7Z419 303 aa12.43□□□□□ -0.42
TPM1-207ENST00000403994 OR11H6Q8NGC7 330 aa12.43□□□□□ -0.42
TPM1-207ENST00000403994 MRPL48Q96GC5 212 aaKnown RBP12.43□□□□□ -0.42
TPM1-207ENST00000403994 SPACA5Q96QH8 159 aa12.43□□□□□ -0.42
TPM1-207ENST00000403994 C9orf16Q9BUW7 83 aa12.43□□□□□ -0.42
TPM1-207ENST00000403994 NPFFR1Q9GZQ6 430 aa12.43□□□□□ -0.42
TPM1-207ENST00000403994 MT-ND2P03891 347 aa12.42□□□□□ -0.42
TPM1-207ENST00000403994 PEX2P28328 305 aa12.42□□□□□ -0.42
TPM1-207ENST00000403994 P2RX3P56373 397 aa12.42□□□□□ -0.42
TPM1-207ENST00000403994 ALKBH1Q13686 389 aaKnown RBP12.42□□□□□ -0.42
TPM1-207ENST00000403994 LHFPL3Q86UP9 236 aa12.42□□□□□ -0.42
TPM1-207ENST00000403994 SYS1Q8N2H4 156 aa12.42□□□□□ -0.42
TPM1-207ENST00000403994 ZNF676Q8N7Q3 588 aa12.42□□□□□ -0.42
TPM1-207ENST00000403994 OR4S1Q8NGB4 309 aa12.42□□□□□ -0.42
TPM1-207ENST00000403994 OR5D18Q8NGL1 313 aa12.42□□□□□ -0.42
TPM1-207ENST00000403994 ISG20L2Q9H9L3 353 aaKnown RBP12.42□□□□□ -0.42
TPM1-207ENST00000403994 HMG20AQ9NP66 347 aa12.42□□□□□ -0.42
TPM1-207ENST00000403994 TCF19Q9Y242 345 aa12.42□□□□□ -0.42
TPM1-207ENST00000403994 MYRFQ9Y2G1 1151 aa12.42□□□□□ -0.42
TPM1-207ENST00000403994 SESN1Q9Y6P5 492 aa12.42□□□□□ -0.42
TPM1-207ENST00000403994 IGHV2-26A0A0B4J1V2 119 aa12.41□□□□□ -0.42
TPM1-207ENST00000403994 SIRPB1O00241 398 aa12.41□□□□□ -0.42
TPM1-207ENST00000403994 MGST3O14880 152 aa12.41□□□□□ -0.42
TPM1-207ENST00000403994 KDM4BO94953 1096 aa12.41□□□□□ -0.42
TPM1-207ENST00000403994 OR2H2O95918 312 aa12.41□□□□□ -0.42
TPM1-207ENST00000403994 OCM2P0CE71 109 aa12.41□□□□□ -0.42
TPM1-207ENST00000403994 OCMP0CE72 109 aaPredicted RBP12.41□□□□□ -0.42
TPM1-207ENST00000403994 KIR2DS4P43632 304 aa12.41□□□□□ -0.42
TPM1-207ENST00000403994 FAM189A2Q15884 450 aa12.41□□□□□ -0.42
TPM1-207ENST00000403994 PDLIM3Q53GG5 364 aaPredicted RBP12.41□□□□□ -0.42
TPM1-207ENST00000403994 C11orf88Q6PI97 169 aa12.41□□□□□ -0.42
TPM1-207ENST00000403994 KLHDC1Q8N7A1 406 aa12.41□□□□□ -0.42
TPM1-207ENST00000403994 OR2T6Q8NHC8 308 aa12.41□□□□□ -0.42
TPM1-207ENST00000403994 RHOXF1Q8NHV9 184 aa12.41□□□□□ -0.42
TPM1-207ENST00000403994 SLC29A1Q99808 456 aa12.41□□□□□ -0.42
TPM1-207ENST00000403994 ZNF649Q9BS31 505 aa12.41□□□□□ -0.42
TPM1-207ENST00000403994 COMMD4Q9H0A8 199 aa12.41□□□□□ -0.42
TPM1-207ENST00000403994 S100A14Q9HCY8 104 aa12.41□□□□□ -0.42
TPM1-207ENST00000403994 AMBNQ9NP70 447 aa12.41□□□□□ -0.42
TPM1-207ENST00000403994 EXOSC4Q9NPD3 245 aaKnown RBP12.41□□□□□ -0.42
TPM1-207ENST00000403994 INPP5EQ9NRR6 644 aa12.41□□□□□ -0.42
TPM1-207ENST00000403994 ERVK13-1Q9NX77 482 aa12.41□□□□□ -0.42
TPM1-207ENST00000403994 FOXJ3Q9UPW0 622 aa12.41□□□□□ -0.42
TPM1-207ENST00000403994 GSTK1Q9Y2Q3 226 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms