RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 OR10AD1Q8NGE0 317 aa11.02□□□□□ -0.65
PPP4R1-202ENST00000400555 LIME1Q9H400 295 aa11.02□□□□□ -0.65
PPP4R1-202ENST00000400555 KCNJ16Q9NPI9 418 aa11.02□□□□□ -0.65
PPP4R1-202ENST00000400555 SLC2A9Q9NRM0 540 aa11.02□□□□□ -0.65
PPP4R1-202ENST00000400555 FAM212BQ9NTI7 297 aaPredicted RBP11.02□□□□□ -0.65
PPP4R1-202ENST00000400555 A0A1W2PR80 420 aa11.01□□□□□ -0.65
PPP4R1-202ENST00000400555 LSM6P62312 80 aaKnown RBP11.01□□□□□ -0.65
PPP4R1-202ENST00000400555 PSG4Q00888 419 aa11.01□□□□□ -0.65
PPP4R1-202ENST00000400555 HGFACQ04756 655 aa11.01□□□□□ -0.65
PPP4R1-202ENST00000400555 DHRS11Q6UWP2 260 aa11.01□□□□□ -0.65
PPP4R1-202ENST00000400555 MRPL21Q7Z2W9 205 aaKnown RBP11.01□□□□□ -0.65
PPP4R1-202ENST00000400555 EIF4E3Q8N5X7 224 aaKnown RBP11.01□□□□□ -0.65
PPP4R1-202ENST00000400555 ZNF611Q8N823 705 aa11.01□□□□□ -0.65
PPP4R1-202ENST00000400555 BCO1Q9HAY6 547 aa11.01□□□□□ -0.65
PPP4R1-202ENST00000400555 IL36RNQ9UBH0 155 aa11.01□□□□□ -0.65
PPP4R1-202ENST00000400555 NOSIPQ9Y314 301 aaKnown RBP11.01□□□□□ -0.65
PPP4R1-202ENST00000400555 CADP27708 2225 aa11.01□□□□□ -0.65
PPP4R1-202ENST00000400555 IGKV1-27A0A075B6S5 117 aa11.01□□□□□ -0.65
PPP4R1-202ENST00000400555 PMS2P1A4D2B8 440 aa11.01□□□□□ -0.65
PPP4R1-202ENST00000400555 CBR3O75828 277 aa11.01□□□□□ -0.65
PPP4R1-202ENST00000400555 CST4P01036 141 aa11.01□□□□□ -0.65
PPP4R1-202ENST00000400555 GSK3AP49840 483 aa11.01□□□□□ -0.65
PPP4R1-202ENST00000400555 RSPO1Q2MKA7 263 aaPredicted RBP11.01□□□□□ -0.65
PPP4R1-202ENST00000400555 SLC16A13Q7RTY0 426 aa11.01□□□□□ -0.65
PPP4R1-202ENST00000400555 MCEMP1Q8IX19 187 aa11.01□□□□□ -0.65
PPP4R1-202ENST00000400555 FAM24BQ8N5W8 94 aa11.01□□□□□ -0.65
PPP4R1-202ENST00000400555 OR6S1Q8NH40 331 aa11.01□□□□□ -0.65
PPP4R1-202ENST00000400555 RHBDD1Q8TEB9 315 aa11.01□□□□□ -0.65
PPP4R1-202ENST00000400555 LRP4O75096 1905 aa11.01□□□□□ -0.65
PPP4R1-202ENST00000400555 IGLV3-12A0A075B6K2 115 aa11.01□□□□□ -0.65
PPP4R1-202ENST00000400555 hCG_1809904A0A1W2PP81 198 aa11.01□□□□□ -0.65
PPP4R1-202ENST00000400555 A0A1W2PR64 198 aa11.01□□□□□ -0.65
PPP4R1-202ENST00000400555 A0A1W2PRV1 198 aa11.01□□□□□ -0.65
PPP4R1-202ENST00000400555 ST8SIA3O43173 380 aa11.01□□□□□ -0.65
PPP4R1-202ENST00000400555 JTBO76095 146 aa11.01□□□□□ -0.65
PPP4R1-202ENST00000400555 VAMP5O95183 116 aa11.01□□□□□ -0.65
PPP4R1-202ENST00000400555 PRF1P14222 555 aa11.01□□□□□ -0.65
PPP4R1-202ENST00000400555 NTF4P34130 210 aa11.01□□□□□ -0.65
PPP4R1-202ENST00000400555 UQCC3Q6UW78 93 aa11.01□□□□□ -0.65
PPP4R1-202ENST00000400555 OR56B2PQ8NGI1 322 aa11.01□□□□□ -0.65
PPP4R1-202ENST00000400555 SAP25Q8TEE9 199 aa11.01□□□□□ -0.65
PPP4R1-202ENST00000400555 IP6K3Q96PC2 410 aa11.01□□□□□ -0.65
PPP4R1-202ENST00000400555 BIN3Q9NQY0 253 aa11.01□□□□□ -0.65
PPP4R1-202ENST00000400555 A6NLC8 198 aa11□□□□□ -0.65
PPP4R1-202ENST00000400555 C1orf196B1AJZ1 125 aa11□□□□□ -0.65
PPP4R1-202ENST00000400555 UMODP07911 640 aa11□□□□□ -0.65
PPP4R1-202ENST00000400555 RAB13P51153 203 aa11□□□□□ -0.65
PPP4R1-202ENST00000400555 ZNF133P52736 654 aaPredicted RBP11□□□□□ -0.65
PPP4R1-202ENST00000400555 SUCLG1P53597 346 aaKnown RBP11□□□□□ -0.65
PPP4R1-202ENST00000400555 CALHM1Q8IU99 346 aa11□□□□□ -0.65
PPP4R1-202ENST00000400555 SKA3Q8IX90 412 aa11□□□□□ -0.65
PPP4R1-202ENST00000400555 HES7Q9BYE0 225 aa11□□□□□ -0.65
PPP4R1-202ENST00000400555 DBX1A6NMT0 343 aa11□□□□□ -0.65
PPP4R1-202ENST00000400555 FCGR3AP08637 254 aa11□□□□□ -0.65
PPP4R1-202ENST00000400555 HLA-GP17693 338 aa11□□□□□ -0.65
PPP4R1-202ENST00000400555 RAB5BP61020 215 aa11□□□□□ -0.65
PPP4R1-202ENST00000400555 RAC1P63000 192 aa11□□□□□ -0.65
PPP4R1-202ENST00000400555 ARL6IP1Q15041 203 aa11□□□□□ -0.65
PPP4R1-202ENST00000400555 CARFQ8N187 725 aa11□□□□□ -0.65
PPP4R1-202ENST00000400555 NANPQ8TBE9 248 aa11□□□□□ -0.65
PPP4R1-202ENST00000400555 KCNS2Q9ULS6 477 aa11□□□□□ -0.65
PPP4R1-202ENST00000400555 MUC3AQ02505 3323 aa11□□□□□ -0.65
PPP4R1-202ENST00000400555 IGHV1-45A0A0A0MS14 117 aa11□□□□□ -0.65
PPP4R1-202ENST00000400555 NKX2-6A6NCS4 301 aa11□□□□□ -0.65
PPP4R1-202ENST00000400555 UMAD1C9J7I0 102 aa11□□□□□ -0.65
PPP4R1-202ENST00000400555 FAM157CP0CG43 387 aa11□□□□□ -0.65
PPP4R1-202ENST00000400555 CFPP27918 469 aa11□□□□□ -0.65
PPP4R1-202ENST00000400555 RPS16P62249 146 aaKnown RBP11□□□□□ -0.65
PPP4R1-202ENST00000400555 GUK1Q16774 197 aa11□□□□□ -0.65
PPP4R1-202ENST00000400555 C17orf78Q8N4C9 275 aa11□□□□□ -0.65
PPP4R1-202ENST00000400555 OR2G3Q8NGZ4 309 aa11□□□□□ -0.65
PPP4R1-202ENST00000400555 NAA60Q9H7X0 242 aa11□□□□□ -0.65
PPP4R1-202ENST00000400555 LUZP4Q9P127 313 aa11□□□□□ -0.65
PPP4R1-202ENST00000400555 NDRG3Q9UGV2 375 aa11□□□□□ -0.65
PPP4R1-202ENST00000400555 TIMM10BQ9Y5J6 103 aa11□□□□□ -0.65
PPP4R1-202ENST00000400555 SPTA1P02549 2419 aa11□□□□□ -0.65
PPP4R1-202ENST00000400555 NBASA2RRP1 2371 aa10.99□□□□□ -0.65
PPP4R1-202ENST00000400555 IGKV1-12A0A0C4DH73 117 aa10.99□□□□□ -0.65
PPP4R1-202ENST00000400555 A0A1W2PPH5 198 aa10.99□□□□□ -0.65
PPP4R1-202ENST00000400555 ATXN7O15265 892 aaPredicted RBP10.99□□□□□ -0.65
PPP4R1-202ENST00000400555 IGKV1D-12P01611 117 aa10.99□□□□□ -0.65
PPP4R1-202ENST00000400555 CD37P11049 281 aa10.99□□□□□ -0.65
PPP4R1-202ENST00000400555 LGI3Q8N145 548 aa10.99□□□□□ -0.65
PPP4R1-202ENST00000400555 ZIC4Q8N9L1 334 aa10.99□□□□□ -0.65
PPP4R1-202ENST00000400555 THOC3Q96J01 351 aaKnown RBP10.99□□□□□ -0.65
PPP4R1-202ENST00000400555 DOCK11Q5JSL3 2073 aa10.99□□□□□ -0.65
PPP4R1-202ENST00000400555 ARF1P84077 181 aaKnown RBP10.99□□□□□ -0.65
PPP4R1-202ENST00000400555 EXT1Q16394 746 aa10.99□□□□□ -0.65
PPP4R1-202ENST00000400555 NSUN5P2Q63ZY6 315 aa10.99□□□□□ -0.65
PPP4R1-202ENST00000400555 SLC35G3Q8N808 338 aa10.99□□□□□ -0.65
PPP4R1-202ENST00000400555 EXTL1Q92935 676 aa10.99□□□□□ -0.65
PPP4R1-202ENST00000400555 Q96M66 194 aa10.99□□□□□ -0.65
PPP4R1-202ENST00000400555 ABHD14AQ9BUJ0 271 aa10.99□□□□□ -0.65
PPP4R1-202ENST00000400555 LRFN1Q9P244 771 aa10.99□□□□□ -0.65
PPP4R1-202ENST00000400555 MMP24Q9Y5R2 645 aa10.99□□□□□ -0.65
PPP4R1-202ENST00000400555 NBEAQ8NFP9 2946 aa10.99□□□□□ -0.65
PPP4R1-202ENST00000400555 NPIPB13A6NJU9 1138 aa10.99□□□□□ -0.65
PPP4R1-202ENST00000400555 GJE1A6NN92 205 aa10.99□□□□□ -0.65
PPP4R1-202ENST00000400555 NPIPB4C9JG80 1138 aa10.99□□□□□ -0.65
PPP4R1-202ENST00000400555 ZNF587BE7ETH6 402 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms