RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 OR5T2Q8NGG2 359 aa14.67□□□□□ -0.06
CTNS-203ENST00000399306 C8orf46Q8TAG6 207 aa14.67□□□□□ -0.06
CTNS-203ENST00000399306 RAB40AQ8WXH6 277 aa14.67□□□□□ -0.06
CTNS-203ENST00000399306 PPIL3Q9H2H8 161 aaKnown RBP14.67□□□□□ -0.06
CTNS-203ENST00000399306 RBFOX1Q9NWB1 397 aaKnown RBP14.67□□□□□ -0.06
CTNS-203ENST00000399306 STUB1Q9UNE7 303 aa14.67□□□□□ -0.06
CTNS-203ENST00000399306 MAB21L2Q9Y586 359 aa14.67□□□□□ -0.06
CTNS-203ENST00000399306 NAV3Q8IVL0 2385 aa14.67□□□□□ -0.06
CTNS-203ENST00000399306 FN1P02751 2386 aaKnown RBP14.66□□□□□ -0.06
CTNS-203ENST00000399306 IGHV2-70DA0A0C4DH43 119 aa14.66□□□□□ -0.06
CTNS-203ENST00000399306 KIR2DS1A0A191URI9 304 aa14.66□□□□□ -0.06
CTNS-203ENST00000399306 MAGEA13PA6NCF6 341 aa14.66□□□□□ -0.06
CTNS-203ENST00000399306 PHF1O43189 567 aaPredicted RBP14.66□□□□□ -0.06
CTNS-203ENST00000399306 MAS1P04201 325 aa14.66□□□□□ -0.06
CTNS-203ENST00000399306 SFTPBP07988 381 aa14.66□□□□□ -0.06
CTNS-203ENST00000399306 UBBP0CG47 229 aa14.66□□□□□ -0.06
CTNS-203ENST00000399306 PRKACAP17612 351 aa14.66□□□□□ -0.06
CTNS-203ENST00000399306 ADRA2CP18825 462 aa14.66□□□□□ -0.06
CTNS-203ENST00000399306 LMO1P25800 156 aa14.66□□□□□ -0.06
CTNS-203ENST00000399306 OR3A4PP47883 348 aa14.66□□□□□ -0.06
CTNS-203ENST00000399306 IL13RA2Q14627 380 aa14.66□□□□□ -0.06
CTNS-203ENST00000399306 RSU1Q15404 277 aa14.66□□□□□ -0.06
CTNS-203ENST00000399306 NEDD8Q15843 81 aa14.66□□□□□ -0.06
CTNS-203ENST00000399306 BTNL3Q6UXE8 466 aa14.66□□□□□ -0.06
CTNS-203ENST00000399306 LINC00596Q86U02 117 aa14.66□□□□□ -0.06
CTNS-203ENST00000399306 JAGN1Q8N5M9 183 aa14.66□□□□□ -0.06
CTNS-203ENST00000399306 CD177Q8N6Q3 437 aa14.66□□□□□ -0.06
CTNS-203ENST00000399306 FAM216BQ8N7L0 139 aa14.66□□□□□ -0.06
CTNS-203ENST00000399306 CHST4Q8NCG5 386 aa14.66□□□□□ -0.06
CTNS-203ENST00000399306 TBC1D15Q8TC07 691 aa14.66□□□□□ -0.06
CTNS-203ENST00000399306 CNTD2Q9H8S5 307 aa14.66□□□□□ -0.06
CTNS-203ENST00000399306 LPAR2Q9HBW0 351 aa14.66□□□□□ -0.06
CTNS-203ENST00000399306 SLC25A10Q9UBX3 287 aaPredicted RBP14.66□□□□□ -0.06
CTNS-203ENST00000399306 CDC42EP3Q9UKI2 254 aa14.66□□□□□ -0.06
CTNS-203ENST00000399306 INSIG2Q9Y5U4 225 aa14.66□□□□□ -0.06
CTNS-203ENST00000399306 TRBV23-1A0A0A0MS06 115 aa14.65□□□□□ -0.06
CTNS-203ENST00000399306 K7N7A8 449 aa14.65□□□□□ -0.06
CTNS-203ENST00000399306 SH2D1BO14796 132 aa14.65□□□□□ -0.06
CTNS-203ENST00000399306 FCN3O75636 299 aa14.65□□□□□ -0.06
CTNS-203ENST00000399306 HAND1O96004 215 aa14.65□□□□□ -0.06
CTNS-203ENST00000399306 HNF1AP20823 631 aa14.65□□□□□ -0.06
CTNS-203ENST00000399306 CALRP27797 417 aaKnown RBP14.65□□□□□ -0.06
CTNS-203ENST00000399306 PAX8Q06710 450 aa14.65□□□□□ -0.06
CTNS-203ENST00000399306 DGUOKQ16854 277 aa14.65□□□□□ -0.06
CTNS-203ENST00000399306 CR1LQ2VPA4 569 aa14.65□□□□□ -0.06
CTNS-203ENST00000399306 TIMM50Q3ZCQ8 353 aa14.65□□□□□ -0.06
CTNS-203ENST00000399306 GDPGP1Q6ZNW5 385 aa14.65□□□□□ -0.06
CTNS-203ENST00000399306 C1QL2Q7Z5L3 287 aa14.65□□□□□ -0.06
CTNS-203ENST00000399306 LY6G5BQ8NDX9 201 aa14.65□□□□□ -0.06
CTNS-203ENST00000399306 OR5D13Q8NGL4 314 aa14.65□□□□□ -0.06
CTNS-203ENST00000399306 PPP1R35Q8TAP8 253 aa14.65□□□□□ -0.06
CTNS-203ENST00000399306 SNX22Q96L94 193 aa14.65□□□□□ -0.06
CTNS-203ENST00000399306 SSR3Q9UNL2 185 aa14.65□□□□□ -0.06
CTNS-203ENST00000399306 GSTK1Q9Y2Q3 226 aa14.65□□□□□ -0.06
CTNS-203ENST00000399306 MRPS28Q9Y2Q9 187 aaKnown RBP14.65□□□□□ -0.06
CTNS-203ENST00000399306 PDCD5O14737 125 aa14.64□□□□□ -0.07
CTNS-203ENST00000399306 ZNF737O75373 536 aa14.64□□□□□ -0.07
CTNS-203ENST00000399306 CSTBP04080 98 aaKnown RBP14.64□□□□□ -0.07
CTNS-203ENST00000399306 CFPP27918 469 aa14.64□□□□□ -0.07
CTNS-203ENST00000399306 CAPZA1P52907 286 aa14.64□□□□□ -0.07
CTNS-203ENST00000399306 BTN2A1Q7KYR7 527 aa14.64□□□□□ -0.07
CTNS-203ENST00000399306 OR6M1Q8NGM8 313 aa14.64□□□□□ -0.07
CTNS-203ENST00000399306 NUDT16L1Q9BRJ7 211 aaKnown RBP14.64□□□□□ -0.07
CTNS-203ENST00000399306 DCTN5Q9BTE1 182 aa14.64□□□□□ -0.07
CTNS-203ENST00000399306 FAM192AQ9GZU8 254 aa14.64□□□□□ -0.07
CTNS-203ENST00000399306 IFT22Q9H7X7 185 aa14.64□□□□□ -0.07
CTNS-203ENST00000399306 EXOSC4Q9NPD3 245 aaKnown RBP14.64□□□□□ -0.07
CTNS-203ENST00000399306 OR14J1Q9UGF5 321 aa14.64□□□□□ -0.07
CTNS-203ENST00000399306 RPUSD1Q9UJJ7 312 aaKnown RBP14.64□□□□□ -0.07
CTNS-203ENST00000399306 ING4Q9UNL4 249 aa14.64□□□□□ -0.07
CTNS-203ENST00000399306 A0A1B0GW55 424 aa14.63□□□□□ -0.07
CTNS-203ENST00000399306 C22orf46C9J442 243 aa14.63□□□□□ -0.07
CTNS-203ENST00000399306 H3BUI4 141 aa14.63□□□□□ -0.07
CTNS-203ENST00000399306 SLC22A1O15245 554 aa14.63□□□□□ -0.07
CTNS-203ENST00000399306 TK1P04183 234 aa14.63□□□□□ -0.07
CTNS-203ENST00000399306 DUX4L2P0CJ85 424 aa14.63□□□□□ -0.07
CTNS-203ENST00000399306 DUX4L3P0CJ86 424 aa14.63□□□□□ -0.07
CTNS-203ENST00000399306 DUX4L4P0CJ87 422 aa14.63□□□□□ -0.07
CTNS-203ENST00000399306 DUX4L5P0CJ88 424 aa14.63□□□□□ -0.07
CTNS-203ENST00000399306 DUX4L6P0CJ89 424 aa14.63□□□□□ -0.07
CTNS-203ENST00000399306 DUX4L7P0CJ90 424 aa14.63□□□□□ -0.07
CTNS-203ENST00000399306 GTF2F2P13984 249 aa14.63□□□□□ -0.07
CTNS-203ENST00000399306 CD36P16671 472 aa14.63□□□□□ -0.07
CTNS-203ENST00000399306 MYL9P24844 172 aa14.63□□□□□ -0.07
CTNS-203ENST00000399306 COL10A1Q03692 680 aa14.63□□□□□ -0.07
CTNS-203ENST00000399306 IKZF1Q13422 519 aa14.63□□□□□ -0.07
CTNS-203ENST00000399306 DUX4L9Q6RFH8 374 aaPredicted RBP14.63□□□□□ -0.07
CTNS-203ENST00000399306 OR8H2Q8N162 312 aa14.63□□□□□ -0.07
CTNS-203ENST00000399306 OSR2Q8N2R0 312 aa14.63□□□□□ -0.07
CTNS-203ENST00000399306 ZNRF1Q8ND25 227 aa14.63□□□□□ -0.07
CTNS-203ENST00000399306 OR4D6Q8NGJ1 314 aa14.63□□□□□ -0.07
CTNS-203ENST00000399306 ST8SIA4Q92187 359 aa14.63□□□□□ -0.07
CTNS-203ENST00000399306 C1orf147Q96MC9 270 aaPredicted RBP14.63□□□□□ -0.07
CTNS-203ENST00000399306 MRI1Q9BV20 369 aa14.63□□□□□ -0.07
CTNS-203ENST00000399306 TMPRSS13Q9BYE2 586 aa14.63□□□□□ -0.07
CTNS-203ENST00000399306 ELL3Q9HB65 397 aaPredicted RBP14.63□□□□□ -0.07
CTNS-203ENST00000399306 MMP26Q9NRE1 261 aa14.63□□□□□ -0.07
CTNS-203ENST00000399306 TXNL4BQ9NX01 149 aaKnown RBP14.63□□□□□ -0.07
CTNS-203ENST00000399306 DUX4Q9UBX2 424 aa14.63□□□□□ -0.07
CTNS-203ENST00000399306 NIPBLQ6KC79 2804 aaeCLIP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms