RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 DLX6P56179 175 aa13.67□□□□□ -0.22
APTR-201ENST00000398043 RPL31P62899 125 aaKnown RBP13.67□□□□□ -0.22
APTR-201ENST00000398043 KLRD1Q13241 179 aa13.67□□□□□ -0.22
APTR-201ENST00000398043 KISS1Q15726 138 aa13.67□□□□□ -0.22
APTR-201ENST00000398043 C6orf141Q5SZD1 244 aa13.67□□□□□ -0.22
APTR-201ENST00000398043 BPIFB6Q8NFQ5 453 aa13.67□□□□□ -0.22
APTR-201ENST00000398043 OR52N4Q8NGI2 321 aa13.67□□□□□ -0.22
APTR-201ENST00000398043 OR51A2Q8NGJ7 313 aa13.67□□□□□ -0.22
APTR-201ENST00000398043 OR5D18Q8NGL1 313 aa13.67□□□□□ -0.22
APTR-201ENST00000398043 TSEN15Q8WW01 171 aaKnown RBP13.67□□□□□ -0.22
APTR-201ENST00000398043 GHSRQ92847 366 aa13.67□□□□□ -0.22
APTR-201ENST00000398043 METTL8Q9H825 291 aaKnown RBP13.67□□□□□ -0.22
APTR-201ENST00000398043 RHOFQ9HBH0 211 aa13.67□□□□□ -0.22
APTR-201ENST00000398043 NOX4Q9NPH5 578 aa13.67□□□□□ -0.22
APTR-201ENST00000398043 ZNF281Q9Y2X9 895 aa13.67□□□□□ -0.22
APTR-201ENST00000398043 A0A0U1RQK1 487 aa13.66□□□□□ -0.22
APTR-201ENST00000398043 PSPNO60542 156 aa13.66□□□□□ -0.22
APTR-201ENST00000398043 HAND1O96004 215 aa13.66□□□□□ -0.22
APTR-201ENST00000398043 CALCBP10092 127 aa13.66□□□□□ -0.22
APTR-201ENST00000398043 SOX2P48431 317 aa13.66□□□□□ -0.22
APTR-201ENST00000398043 MED21Q13503 144 aa13.66□□□□□ -0.22
APTR-201ENST00000398043 ZNF273Q14593 569 aa13.66□□□□□ -0.22
APTR-201ENST00000398043 SPIN3Q5JUX0 258 aa13.66□□□□□ -0.22
APTR-201ENST00000398043 RNLSQ5VYX0 342 aa13.66□□□□□ -0.22
APTR-201ENST00000398043 TCF23Q7RTU1 214 aa13.66□□□□□ -0.22
APTR-201ENST00000398043 PDZD9Q8IXQ8 264 aa13.66□□□□□ -0.22
APTR-201ENST00000398043 FAM185AQ8N0U4 392 aa13.66□□□□□ -0.22
APTR-201ENST00000398043 OR8H2Q8N162 312 aa13.66□□□□□ -0.22
APTR-201ENST00000398043 NANOGP1Q8N7R0 232 aa13.66□□□□□ -0.22
APTR-201ENST00000398043 ZSCAN4Q8NAM6 433 aaPredicted RBP13.66□□□□□ -0.22
APTR-201ENST00000398043 OR4M1Q8NGD0 313 aa13.66□□□□□ -0.22
APTR-201ENST00000398043 OR13C5Q8NGS8 318 aa13.66□□□□□ -0.22
APTR-201ENST00000398043 TMEM106AQ96A25 262 aa13.66□□□□□ -0.22
APTR-201ENST00000398043 AJUBAQ96IF1 538 aa13.66□□□□□ -0.22
APTR-201ENST00000398043 SNX22Q96L94 193 aa13.66□□□□□ -0.22
APTR-201ENST00000398043 PAK1IP1Q9NWT1 392 aaPredicted RBP13.66□□□□□ -0.22
APTR-201ENST00000398043 CHCHD3Q9NX63 227 aaKnown RBP13.66□□□□□ -0.22
APTR-201ENST00000398043 TAS2R4Q9NYW5 299 aa13.66□□□□□ -0.22
APTR-201ENST00000398043 HOXA3O43365 443 aaPredicted RBP13.65□□□□□ -0.22
APTR-201ENST00000398043 CYB5AP00167 134 aa13.65□□□□□ -0.22
APTR-201ENST00000398043 ALDOBP05062 364 aa13.65□□□□□ -0.22
APTR-201ENST00000398043 CD1AP06126 327 aa13.65□□□□□ -0.22
APTR-201ENST00000398043 MELTFP08582 738 aa13.65□□□□□ -0.22
APTR-201ENST00000398043 PRKACAP17612 351 aa13.65□□□□□ -0.22
APTR-201ENST00000398043 IGFBP3P17936 291 aaPredicted RBP13.65□□□□□ -0.22
APTR-201ENST00000398043 RAB3AP20336 220 aa13.65□□□□□ -0.22
APTR-201ENST00000398043 LMO1P25800 156 aa13.65□□□□□ -0.22
APTR-201ENST00000398043 DUSP1P28562 367 aa13.65□□□□□ -0.22
APTR-201ENST00000398043 GUCA2AQ02747 115 aa13.65□□□□□ -0.22
APTR-201ENST00000398043 ASCL4Q6XD76 172 aa13.65□□□□□ -0.22
APTR-201ENST00000398043 LDLRAD3Q86YD5 345 aa13.65□□□□□ -0.22
APTR-201ENST00000398043 ZFP41Q8N8Y5 198 aa13.65□□□□□ -0.22
APTR-201ENST00000398043 ASCC1Q8N9N2 400 aaKnown RBP13.65□□□□□ -0.22
APTR-201ENST00000398043 ANKRD60Q9BZ19 345 aa13.65□□□□□ -0.22
APTR-201ENST00000398043 TRBV5-7A0A0A0MS05 114 aa13.64□□□□□ -0.23
APTR-201ENST00000398043 C17orf98A8MV24 154 aa13.64□□□□□ -0.23
APTR-201ENST00000398043 GABRPO00591 440 aa13.64□□□□□ -0.23
APTR-201ENST00000398043 GPX5O75715 221 aa13.64□□□□□ -0.23
APTR-201ENST00000398043 CDK1P06493 297 aa13.64□□□□□ -0.23
APTR-201ENST00000398043 HCKP08631 526 aa13.64□□□□□ -0.23
APTR-201ENST00000398043 OCM2P0CE71 109 aa13.64□□□□□ -0.23
APTR-201ENST00000398043 HKR1P10072 659 aa13.64□□□□□ -0.23
APTR-201ENST00000398043 CCL3L1P16619 93 aa13.64□□□□□ -0.23
APTR-201ENST00000398043 MYF6P23409 242 aa13.64□□□□□ -0.23
APTR-201ENST00000398043 UBE2E1P51965 193 aa13.64□□□□□ -0.23
APTR-201ENST00000398043 WNT4P56705 351 aa13.64□□□□□ -0.23
APTR-201ENST00000398043 ERVFRD-1P60508 538 aa13.64□□□□□ -0.23
APTR-201ENST00000398043 ACTG1P63261 375 aa13.64□□□□□ -0.23
APTR-201ENST00000398043 NCR3LG1Q68D85 454 aa13.64□□□□□ -0.23
APTR-201ENST00000398043 ELP2Q6IA86 826 aa13.64□□□□□ -0.23
APTR-201ENST00000398043 Q6P435 159 aa13.64□□□□□ -0.23
APTR-201ENST00000398043 PNKDQ8N490 385 aa13.64□□□□□ -0.23
APTR-201ENST00000398043 STX19Q8N4C7 294 aa13.64□□□□□ -0.23
APTR-201ENST00000398043 Q8NFD4 153 aa13.64□□□□□ -0.23
APTR-201ENST00000398043 PXT1Q8NFP0 134 aa13.64□□□□□ -0.23
APTR-201ENST00000398043 OR4S1Q8NGB4 309 aa13.64□□□□□ -0.23
APTR-201ENST00000398043 OR5D13Q8NGL4 314 aa13.64□□□□□ -0.23
APTR-201ENST00000398043 TBC1D15Q8TC07 691 aa13.64□□□□□ -0.23
APTR-201ENST00000398043 SGCDQ92629 289 aa13.64□□□□□ -0.23
APTR-201ENST00000398043 ORAI1Q96D31 301 aa13.64□□□□□ -0.23
APTR-201ENST00000398043 CDCA4Q9BXL8 241 aa13.64□□□□□ -0.23
APTR-201ENST00000398043 NEK6Q9HC98 313 aa13.64□□□□□ -0.23
APTR-201ENST00000398043 LSM2Q9Y333 95 aaKnown RBP13.64□□□□□ -0.23
APTR-201ENST00000398043 NPFFO15130 113 aa13.63□□□□□ -0.23
APTR-201ENST00000398043 CD2P06729 351 aa13.63□□□□□ -0.23
APTR-201ENST00000398043 OCMP0CE72 109 aaPredicted RBP13.63□□□□□ -0.23
APTR-201ENST00000398043 TMEM225BP0DP42 221 aa13.63□□□□□ -0.23
APTR-201ENST00000398043 OR3A1P47881 315 aa13.63□□□□□ -0.23
APTR-201ENST00000398043 TAS2R43P59537 309 aa13.63□□□□□ -0.23
APTR-201ENST00000398043 SLC35A2P78381 396 aa13.63□□□□□ -0.23
APTR-201ENST00000398043 ACSM1Q08AH1 577 aa13.63□□□□□ -0.23
APTR-201ENST00000398043 RIPK1Q13546 671 aa13.63□□□□□ -0.23
APTR-201ENST00000398043 BLMHQ13867 455 aa13.63□□□□□ -0.23
APTR-201ENST00000398043 IRF3Q14653 427 aa13.63□□□□□ -0.23
APTR-201ENST00000398043 YIF1BQ5BJH7 314 aa13.63□□□□□ -0.23
APTR-201ENST00000398043 FIP1L1Q6UN15 594 aaKnown RBP13.63□□□□□ -0.23
APTR-201ENST00000398043 TMEM86BQ8N661 226 aa13.63□□□□□ -0.23
APTR-201ENST00000398043 GCDHQ92947 438 aaPredicted RBP13.63□□□□□ -0.23
APTR-201ENST00000398043 ZDHHC16Q969W1 377 aa13.63□□□□□ -0.23
APTR-201ENST00000398043 SLC25A28Q96A46 364 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms