RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 CAV3P56539 151 aa17.53■□□□□ 0.4
TSPAN4-206ENST00000397408 RPS25P62851 125 aaKnown RBP17.53■□□□□ 0.4
TSPAN4-206ENST00000397408 FAM27D1Q5T7N8 215 aa17.53■□□□□ 0.4
TSPAN4-206ENST00000397408 PHC2Q8IXK0 858 aa17.53■□□□□ 0.4
TSPAN4-206ENST00000397408 PNLDC1Q8NA58 520 aaKnown RBP17.53■□□□□ 0.4
TSPAN4-206ENST00000397408 DCTN5Q9BTE1 182 aa17.53■□□□□ 0.4
TSPAN4-206ENST00000397408 HMG20AQ9NP66 347 aa17.53■□□□□ 0.4
TSPAN4-206ENST00000397408 MXRA5Q9NR99 2828 aa17.52■□□□□ 0.4
TSPAN4-206ENST00000397408 HAND1O96004 215 aa17.52■□□□□ 0.4
TSPAN4-206ENST00000397408 MAS1P04201 325 aa17.52■□□□□ 0.4
TSPAN4-206ENST00000397408 DUSP1P28562 367 aa17.52■□□□□ 0.4
TSPAN4-206ENST00000397408 FGF12P61328 243 aa17.52■□□□□ 0.4
TSPAN4-206ENST00000397408 COL10A1Q03692 680 aa17.52■□□□□ 0.4
TSPAN4-206ENST00000397408 UNQ9370/PRO34162Q6UXP9 181 aa17.52■□□□□ 0.4
TSPAN4-206ENST00000397408 SPARTQ8N0X7 666 aa17.52■□□□□ 0.4
TSPAN4-206ENST00000397408 ASCC1Q8N9N2 400 aaKnown RBP17.52■□□□□ 0.4
TSPAN4-206ENST00000397408 PXT1Q8NFP0 134 aa17.52■□□□□ 0.4
TSPAN4-206ENST00000397408 LRRC42Q9Y546 428 aa17.52■□□□□ 0.4
TSPAN4-206ENST00000397408 SC5DO75845 299 aa17.51■□□□□ 0.39
TSPAN4-206ENST00000397408 LIPFP07098 398 aa17.51■□□□□ 0.39
TSPAN4-206ENST00000397408 ARMCX4Q5H9R4 360 aa17.51■□□□□ 0.39
TSPAN4-206ENST00000397408 SPIN3Q5JUX0 258 aa17.51■□□□□ 0.39
TSPAN4-206ENST00000397408 ZNF773Q6PK81 442 aa17.51■□□□□ 0.39
TSPAN4-206ENST00000397408 CEACAM19Q7Z692 300 aa17.51■□□□□ 0.39
TSPAN4-206ENST00000397408 NANPQ8TBE9 248 aa17.51■□□□□ 0.39
TSPAN4-206ENST00000397408 RHOFQ9HBH0 211 aa17.51■□□□□ 0.39
TSPAN4-206ENST00000397408 GSTK1Q9Y2Q3 226 aa17.51■□□□□ 0.39
TSPAN4-206ENST00000397408 CHRM2P08172 466 aa17.5■□□□□ 0.39
TSPAN4-206ENST00000397408 PPIAL4GP0DN37 164 aa17.5■□□□□ 0.39
TSPAN4-206ENST00000397408 PSMA1P25786 263 aaKnown RBP17.5■□□□□ 0.39
TSPAN4-206ENST00000397408 PTGFRP43088 359 aa17.5■□□□□ 0.39
TSPAN4-206ENST00000397408 ZNF146Q15072 292 aa17.5■□□□□ 0.39
TSPAN4-206ENST00000397408 TRAM1Q15629 374 aa17.5■□□□□ 0.39
TSPAN4-206ENST00000397408 KCTD21Q4G0X4 260 aa17.5■□□□□ 0.39
TSPAN4-206ENST00000397408 JAGN1Q8N5M9 183 aa17.5■□□□□ 0.39
TSPAN4-206ENST00000397408 LY6G5BQ8NDX9 201 aa17.5■□□□□ 0.39
TSPAN4-206ENST00000397408 OR10K1Q8NGX5 313 aa17.5■□□□□ 0.39
TSPAN4-206ENST00000397408 RGS9O75916 674 aaPredicted RBP17.49■□□□□ 0.39
TSPAN4-206ENST00000397408 CDRT1O95170 752 aa17.49■□□□□ 0.39
TSPAN4-206ENST00000397408 FSHBP01225 129 aa17.49■□□□□ 0.39
TSPAN4-206ENST00000397408 TK1P04183 234 aa17.49■□□□□ 0.39
TSPAN4-206ENST00000397408 GABRA5P31644 462 aa17.49■□□□□ 0.39
TSPAN4-206ENST00000397408 GP2P55259 537 aaKnown RBP17.49■□□□□ 0.39
TSPAN4-206ENST00000397408 RSU1Q15404 277 aa17.49■□□□□ 0.39
TSPAN4-206ENST00000397408 SSX1Q16384 188 aa17.49■□□□□ 0.39
TSPAN4-206ENST00000397408 HSD17B12Q53GQ0 312 aa17.49■□□□□ 0.39
TSPAN4-206ENST00000397408 UBE2UQ5VVX9 321 aa17.49■□□□□ 0.39
TSPAN4-206ENST00000397408 PRIMA1Q86XR5 153 aa17.49■□□□□ 0.39
TSPAN4-206ENST00000397408 NKAIN3Q8N8D7 197 aa17.49■□□□□ 0.39
TSPAN4-206ENST00000397408 C8orf46Q8TAG6 207 aa17.49■□□□□ 0.39
TSPAN4-206ENST00000397408 FCGR1BQ92637 280 aa17.49■□□□□ 0.39
TSPAN4-206ENST00000397408 PCGF1Q9BSM1 259 aa17.49■□□□□ 0.39
TSPAN4-206ENST00000397408 FAM234AQ9H0X4 552 aa17.49■□□□□ 0.39
TSPAN4-206ENST00000397408 CNTD2Q9H8S5 307 aa17.49■□□□□ 0.39
TSPAN4-206ENST00000397408 TCF7L1Q9HCS4 588 aa17.49■□□□□ 0.39
TSPAN4-206ENST00000397408 EXOSC4Q9NPD3 245 aaKnown RBP17.49■□□□□ 0.39
TSPAN4-206ENST00000397408 ONECUT1Q9UBC0 465 aa17.49■□□□□ 0.39
TSPAN4-206ENST00000397408 GLS2Q9UI32 602 aa17.49■□□□□ 0.39
TSPAN4-206ENST00000397408 SF3B6Q9Y3B4 125 aaKnown RBP17.49■□□□□ 0.39
TSPAN4-206ENST00000397408 A0A1W2PQ09 198 aa17.48■□□□□ 0.39
TSPAN4-206ENST00000397408 K7N7A8 449 aa17.48■□□□□ 0.39
TSPAN4-206ENST00000397408 ZNF737O75373 536 aa17.48■□□□□ 0.39
TSPAN4-206ENST00000397408 UCHL1P09936 223 aa17.48■□□□□ 0.39
TSPAN4-206ENST00000397408 PSMB9P28065 219 aa17.48■□□□□ 0.39
TSPAN4-206ENST00000397408 MTNR1BP49286 362 aa17.48■□□□□ 0.39
TSPAN4-206ENST00000397408 ARF6P62330 175 aa17.48■□□□□ 0.39
TSPAN4-206ENST00000397408 METTL11BQ5VVY1 283 aa17.48■□□□□ 0.39
TSPAN4-206ENST00000397408 TMEM91Q6ZNR0 172 aa17.48■□□□□ 0.39
TSPAN4-206ENST00000397408 MUL1Q969V5 352 aa17.48■□□□□ 0.39
TSPAN4-206ENST00000397408 UPRTQ96BW1 309 aa17.48■□□□□ 0.39
TSPAN4-206ENST00000397408 PPIL3Q9H2H8 161 aaKnown RBP17.48■□□□□ 0.39
TSPAN4-206ENST00000397408 SEBOXQ9HB31 216 aaPredicted RBP17.48■□□□□ 0.39
TSPAN4-206ENST00000397408 ING4Q9UNL4 249 aa17.48■□□□□ 0.39
TSPAN4-206ENST00000397408 TRBV23-1A0A0A0MS06 115 aa17.47■□□□□ 0.39
TSPAN4-206ENST00000397408 TMEM82A0PJX8 343 aa17.47■□□□□ 0.39
TSPAN4-206ENST00000397408 EPHA1P21709 976 aa17.47■□□□□ 0.39
TSPAN4-206ENST00000397408 GABRR1P24046 479 aa17.47■□□□□ 0.39
TSPAN4-206ENST00000397408 BMXP51813 675 aa17.47■□□□□ 0.39
TSPAN4-206ENST00000397408 FABP5Q01469 135 aa17.47■□□□□ 0.39
TSPAN4-206ENST00000397408 KLF17Q5JT82 389 aaPredicted RBP17.47■□□□□ 0.39
TSPAN4-206ENST00000397408 ELP2Q6IA86 826 aa17.47■□□□□ 0.39
TSPAN4-206ENST00000397408 ASCL4Q6XD76 172 aa17.47■□□□□ 0.39
TSPAN4-206ENST00000397408 FAM185AQ8N0U4 392 aa17.47■□□□□ 0.39
TSPAN4-206ENST00000397408 PHYHIPQ92561 330 aa17.47■□□□□ 0.39
TSPAN4-206ENST00000397408 WDFY2Q96P53 400 aa17.47■□□□□ 0.39
TSPAN4-206ENST00000397408 S100A13Q99584 98 aa17.47■□□□□ 0.39
TSPAN4-206ENST00000397408 METTL9Q9H1A3 318 aa17.47■□□□□ 0.39
TSPAN4-206ENST00000397408 C19orf12Q9NSK7 152 aa17.47■□□□□ 0.39
TSPAN4-206ENST00000397408 TRAV40A0A0B4J280 105 aa17.47■□□□□ 0.39
TSPAN4-206ENST00000397408 SIRPB1O00241 398 aa17.47■□□□□ 0.39
TSPAN4-206ENST00000397408 SH2D1BO14796 132 aa17.47■□□□□ 0.39
TSPAN4-206ENST00000397408 TOX4O94842 621 aa17.47■□□□□ 0.39
TSPAN4-206ENST00000397408 HTR3BO95264 441 aa17.47■□□□□ 0.39
TSPAN4-206ENST00000397408 OR2H2O95918 312 aa17.47■□□□□ 0.39
TSPAN4-206ENST00000397408 IFNA2P01563 188 aa17.47■□□□□ 0.39
TSPAN4-206ENST00000397408 MMP9P14780 707 aa17.47■□□□□ 0.39
TSPAN4-206ENST00000397408 C17orf107Q6ZR85 190 aa17.47■□□□□ 0.39
TSPAN4-206ENST00000397408 LRRTM1Q86UE6 522 aa17.47■□□□□ 0.39
TSPAN4-206ENST00000397408 OR8H2Q8N162 312 aa17.47■□□□□ 0.39
TSPAN4-206ENST00000397408 OR4M1Q8NGD0 313 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms