RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 LRRC29Q8WV35 223 aa14.25□□□□□ -0.13
TSPAN4-205ENST00000397406 EMG1Q92979 244 aaKnown RBP14.25□□□□□ -0.13
TSPAN4-205ENST00000397406 POM121Q96HA1 1249 aa14.25□□□□□ -0.13
TSPAN4-205ENST00000397406 NUDT16L1Q9BRJ7 211 aaKnown RBP14.25□□□□□ -0.13
TSPAN4-205ENST00000397406 LAMP3Q9UQV4 416 aa14.25□□□□□ -0.13
TSPAN4-205ENST00000397406 ST3GAL6Q9Y274 331 aa14.25□□□□□ -0.13
TSPAN4-205ENST00000397406 SETD2Q9BYW2 2564 aaPredicted RBP14.25□□□□□ -0.13
TSPAN4-205ENST00000397406 SRRM5B3KS81 715 aa14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 GEMIN2O14893 280 aaKnown RBP14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 WNT9BO14905 357 aa14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 TPD52L2O43399 206 aaKnown RBP14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 SCGNO76038 276 aa14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 TPPPO94811 219 aa14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 NXPH2O95156 264 aa14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 LHBP01229 141 aa14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 HLA-DQB1P01920 261 aa14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 TMEM50BP56557 158 aa14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 RIPPLY3P57055 190 aa14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 TAS2R20P59543 309 aa14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 PYHIN1Q6K0P9 492 aa14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 OR56B1Q8NGI3 324 aa14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 OR10R2Q8NGX6 335 aa14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 PHF21AQ96BD5 680 aa14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 ABHD1Q96SE0 405 aa14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 SDHCQ99643 169 aaPredicted RBP14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 VRK1Q99986 396 aaPredicted RBP14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 CACNG6Q9BXT2 260 aa14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 SRRQ9GZT4 340 aa14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 GSX1Q9H4S2 264 aaPredicted RBP14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 ZNF581Q9P0T4 197 aa14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 RABL2AQ9UBK7 228 aaPredicted RBP14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 RABL2BQ9UNT1 228 aa14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 PPP1R3CQ9UQK1 317 aa14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 TRAV18A0A075B6X5 111 aa14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 FAM90A10PA6NDY2 464 aa14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 FAM90A18PA6NE21 464 aa14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 FAM90A16PA6NEW6 464 aa14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 FAM90A20PA6NIJ5 464 aa14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 FAM90A8PA6NJQ4 464 aa14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 FAM90A7PA6NKC0 464 aa14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 FAM90A22PA8MWA6 464 aa14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 FAM90A12PA8MX19 464 aa14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 FAM90A5PA8MXJ8 464 aa14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 FAM90A23PA8MXZ1 464 aa14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 J3QRK9 145 aa14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 HPXP02790 462 aa14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 FAM90A15PP0C7V4 464 aa14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 FAM90A13PP0C7W8 464 aa14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 FAM90A14PP0C7W9 464 aa14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 FAM90A24PP0C7X0 464 aa14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 EGR1P18146 543 aa14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 CD40LGP29965 261 aa14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 PPP5CP53041 499 aa14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 TAF9Q16594 264 aa14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 ZNF181Q2M3W8 571 aa14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 SIGIRRQ6IA17 410 aa14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 ACP7Q6ZNF0 438 aa14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 RTN4RL2Q86UN3 420 aa14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 IGFBPL1Q8WX77 278 aa14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 WDR13Q9H1Z4 485 aa14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 TREM2Q9NZC2 230 aa14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 RNF7Q9UBF6 113 aa14.24□□□□□ -0.13
TSPAN4-205ENST00000397406 H7C417 338 aa14.23□□□□□ -0.13
TSPAN4-205ENST00000397406 GLRA1P23415 457 aa14.23□□□□□ -0.13
TSPAN4-205ENST00000397406 GABRR1P24046 479 aa14.23□□□□□ -0.13
TSPAN4-205ENST00000397406 BLVRBP30043 206 aaPredicted RBP14.23□□□□□ -0.13
TSPAN4-205ENST00000397406 SNU13P55769 128 aaKnown RBP14.23□□□□□ -0.13
TSPAN4-205ENST00000397406 GMFBP60983 142 aa14.23□□□□□ -0.13
TSPAN4-205ENST00000397406 IL13RA2Q14627 380 aa14.23□□□□□ -0.13
TSPAN4-205ENST00000397406 MPV17LQ2QL34 196 aa14.23□□□□□ -0.13
TSPAN4-205ENST00000397406 ZNF260Q3ZCT1 412 aa14.23□□□□□ -0.13
TSPAN4-205ENST00000397406 PLAC9Q5JTB6 97 aa14.23□□□□□ -0.13
TSPAN4-205ENST00000397406 C20orf204Q6ZNR8 217 aa14.23□□□□□ -0.13
TSPAN4-205ENST00000397406 LINC00596Q86U02 117 aa14.23□□□□□ -0.13
TSPAN4-205ENST00000397406 OR11L1Q8NGX0 322 aa14.23□□□□□ -0.13
TSPAN4-205ENST00000397406 CYYR1Q96J86 154 aa14.23□□□□□ -0.13
TSPAN4-205ENST00000397406 RASL12Q9NYN1 266 aa14.23□□□□□ -0.13
TSPAN4-205ENST00000397406 MRPS7Q9Y2R9 242 aaKnown RBP14.23□□□□□ -0.13
TSPAN4-205ENST00000397406 CACNG2Q9Y698 323 aa14.23□□□□□ -0.13
TSPAN4-205ENST00000397406 C2CD3Q4AC94 2353 aa14.22□□□□□ -0.13
TSPAN4-205ENST00000397406 CTDSPLO15194 276 aa14.22□□□□□ -0.13
TSPAN4-205ENST00000397406 CYB5R3P00387 301 aaPredicted RBP14.22□□□□□ -0.13
TSPAN4-205ENST00000397406 PITPNAQ00169 270 aa14.22□□□□□ -0.13
TSPAN4-205ENST00000397406 ZNF146Q15072 292 aa14.22□□□□□ -0.13
TSPAN4-205ENST00000397406 PDCD1Q15116 288 aa14.22□□□□□ -0.13
TSPAN4-205ENST00000397406 PYDC2Q56P42 97 aa14.22□□□□□ -0.13
TSPAN4-205ENST00000397406 SNX29P2Q8IUI4 249 aa14.22□□□□□ -0.13
TSPAN4-205ENST00000397406 RAB3CQ96E17 227 aa14.22□□□□□ -0.13
TSPAN4-205ENST00000397406 SEH1LQ96EE3 360 aa14.22□□□□□ -0.13
TSPAN4-205ENST00000397406 ARHGAP5-AS1Q96IT6 56 aa14.22□□□□□ -0.13
TSPAN4-205ENST00000397406 RAB1BQ9H0U4 201 aa14.22□□□□□ -0.13
TSPAN4-205ENST00000397406 AUNIPQ9H7T9 357 aa14.22□□□□□ -0.13
TSPAN4-205ENST00000397406 DCAF16Q9NXF7 216 aa14.22□□□□□ -0.13
TSPAN4-205ENST00000397406 IGHV1-69-2A0A0G2JMI3 117 aa14.21□□□□□ -0.13
TSPAN4-205ENST00000397406 MFNGO00587 321 aa14.21□□□□□ -0.13
TSPAN4-205ENST00000397406 PTHLHP12272 177 aa14.21□□□□□ -0.13
TSPAN4-205ENST00000397406 HIST1H1DP16402 221 aaKnown RBP14.21□□□□□ -0.13
TSPAN4-205ENST00000397406 GNB3P16520 340 aa14.21□□□□□ -0.13
TSPAN4-205ENST00000397406 CHATP28329 748 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms