RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 IFITM3Q01628 133 aa16.1■□□□□ 0.17
TSPAN4-204ENST00000397404 TAF9Q16594 264 aa16.1■□□□□ 0.17
TSPAN4-204ENST00000397404 SWI5Q1ZZU3 235 aa16.1■□□□□ 0.17
TSPAN4-204ENST00000397404 MOGAT2Q3SYC2 334 aa16.1■□□□□ 0.17
TSPAN4-204ENST00000397404 ZNF57Q68EA5 555 aaPredicted RBP16.1■□□□□ 0.17
TSPAN4-204ENST00000397404 C11orf53Q8IXP5 236 aa16.1■□□□□ 0.17
TSPAN4-204ENST00000397404 C1orf87Q8N0U7 546 aa16.1■□□□□ 0.17
TSPAN4-204ENST00000397404 POC5Q8NA72 575 aa16.1■□□□□ 0.17
TSPAN4-204ENST00000397404 OR52I2Q8NH67 350 aa16.1■□□□□ 0.17
TSPAN4-204ENST00000397404 CHPT1Q8WUD6 406 aa16.1■□□□□ 0.17
TSPAN4-204ENST00000397404 SEH1LQ96EE3 360 aa16.1■□□□□ 0.17
TSPAN4-204ENST00000397404 DECR2Q9NUI1 292 aa16.1■□□□□ 0.17
TSPAN4-204ENST00000397404 RBFOX1Q9NWB1 397 aaKnown RBP16.1■□□□□ 0.17
TSPAN4-204ENST00000397404 TREM2Q9NZC2 230 aa16.1■□□□□ 0.17
TSPAN4-204ENST00000397404 EDARQ9UNE0 448 aa16.1■□□□□ 0.17
TSPAN4-204ENST00000397404 SRRM5B3KS81 715 aa16.1■□□□□ 0.17
TSPAN4-204ENST00000397404 SH2D1BO14796 132 aa16.1■□□□□ 0.17
TSPAN4-204ENST00000397404 ORC5O43913 435 aa16.1■□□□□ 0.17
TSPAN4-204ENST00000397404 OR7C1O76099 320 aaPredicted RBP16.1■□□□□ 0.17
TSPAN4-204ENST00000397404 KNG1P01042 644 aa16.1■□□□□ 0.17
TSPAN4-204ENST00000397404 IRF2P14316 349 aa16.1■□□□□ 0.17
TSPAN4-204ENST00000397404 KCNJ3P48549 501 aa16.1■□□□□ 0.17
TSPAN4-204ENST00000397404 DGCR2P98153 550 aa16.1■□□□□ 0.17
TSPAN4-204ENST00000397404 ARHGAP5-AS1Q96IT6 56 aa16.1■□□□□ 0.17
TSPAN4-204ENST00000397404 OCSTAMPQ9BR26 566 aa16.1■□□□□ 0.17
TSPAN4-204ENST00000397404 PECRQ9BY49 303 aa16.1■□□□□ 0.17
TSPAN4-204ENST00000397404 COPZ2Q9P299 210 aa16.1■□□□□ 0.17
TSPAN4-204ENST00000397404 ANKRD20A5PA0PJZ0 165 aa16.09■□□□□ 0.17
TSPAN4-204ENST00000397404 TMEM235A6NFC5 223 aa16.09■□□□□ 0.17
TSPAN4-204ENST00000397404 HS3ST1O14792 307 aa16.09■□□□□ 0.17
TSPAN4-204ENST00000397404 RHBDL1O75783 438 aa16.09■□□□□ 0.17
TSPAN4-204ENST00000397404 GLRA1P23415 457 aa16.09■□□□□ 0.17
TSPAN4-204ENST00000397404 DTYMKP23919 212 aa16.09■□□□□ 0.17
TSPAN4-204ENST00000397404 MDH2P40926 338 aaKnown RBP16.09■□□□□ 0.17
TSPAN4-204ENST00000397404 TAS2R19P59542 299 aa16.09■□□□□ 0.17
TSPAN4-204ENST00000397404 SRSF7Q16629 238 aaKnown RBP eCLIP16.09■□□□□ 0.17
TSPAN4-204ENST00000397404 PIGYQ3MUY2 71 aa16.09■□□□□ 0.17
TSPAN4-204ENST00000397404 ACTBL2Q562R1 376 aa16.09■□□□□ 0.17
TSPAN4-204ENST00000397404 PLAC9Q5JTB6 97 aa16.09■□□□□ 0.17
TSPAN4-204ENST00000397404 SHEQ5VZ18 495 aa16.09■□□□□ 0.17
TSPAN4-204ENST00000397404 SAP30LQ9HAJ7 183 aa16.09■□□□□ 0.17
TSPAN4-204ENST00000397404 CBLN4Q9NTU7 201 aa16.09■□□□□ 0.17
TSPAN4-204ENST00000397404 C1orf123Q9NWV4 160 aa16.09■□□□□ 0.17
TSPAN4-204ENST00000397404 RNF7Q9UBF6 113 aa16.09■□□□□ 0.17
TSPAN4-204ENST00000397404 hCG_1807616A0A1W2PRN6 198 aa16.08■□□□□ 0.16
TSPAN4-204ENST00000397404 A6NNC1 897 aa16.08■□□□□ 0.16
TSPAN4-204ENST00000397404 GNB3P16520 340 aa16.08■□□□□ 0.16
TSPAN4-204ENST00000397404 SNTB1Q13884 538 aaKnown RBP16.08■□□□□ 0.16
TSPAN4-204ENST00000397404 OXA1LQ15070 435 aa16.08■□□□□ 0.16
TSPAN4-204ENST00000397404 TRIM16LQ309B1 348 aa16.08■□□□□ 0.16
TSPAN4-204ENST00000397404 MEX3BQ6ZN04 569 aaKnown RBP16.08■□□□□ 0.16
TSPAN4-204ENST00000397404 TMEM229BQ8NBD8 167 aa16.08■□□□□ 0.16
TSPAN4-204ENST00000397404 LILRB1Q8NHL6 650 aaPredicted RBP16.08■□□□□ 0.16
TSPAN4-204ENST00000397404 ITLN1Q8WWA0 313 aa16.08■□□□□ 0.16
TSPAN4-204ENST00000397404 GCM1Q9NP62 436 aa16.08■□□□□ 0.16
TSPAN4-204ENST00000397404 IFT46Q9NQC8 304 aa16.08■□□□□ 0.16
TSPAN4-204ENST00000397404 ANAPC10Q9UM13 185 aa16.08■□□□□ 0.16
TSPAN4-204ENST00000397404 PPP1R3CQ9UQK1 317 aa16.08■□□□□ 0.16
TSPAN4-204ENST00000397404 UBR5O95071 2799 aaPredicted RBP16.08■□□□□ 0.16
TSPAN4-204ENST00000397404 MCRIP1C9JLW8 97 aa16.07■□□□□ 0.16
TSPAN4-204ENST00000397404 LYRM1O43325 122 aa16.07■□□□□ 0.16
TSPAN4-204ENST00000397404 LHBP01229 141 aa16.07■□□□□ 0.16
TSPAN4-204ENST00000397404 CD3GP09693 182 aa16.07■□□□□ 0.16
TSPAN4-204ENST00000397404 IKZF1Q13422 519 aa16.07■□□□□ 0.16
TSPAN4-204ENST00000397404 ARFRP1Q13795 201 aa16.07■□□□□ 0.16
TSPAN4-204ENST00000397404 MST1LQ2TV78 715 aa16.07■□□□□ 0.16
TSPAN4-204ENST00000397404 PRAMEF6Q5VXH4 476 aa16.07■□□□□ 0.16
TSPAN4-204ENST00000397404 ACP7Q6ZNF0 438 aa16.07■□□□□ 0.16
TSPAN4-204ENST00000397404 DTX2Q86UW9 622 aa16.07■□□□□ 0.16
TSPAN4-204ENST00000397404 DTX3Q8N9I9 347 aa16.07■□□□□ 0.16
TSPAN4-204ENST00000397404 HS3ST6Q96QI5 342 aa16.07■□□□□ 0.16
TSPAN4-204ENST00000397404 TBC1D24Q9ULP9 559 aa16.07■□□□□ 0.16
TSPAN4-204ENST00000397404 MGAT4AQ9UM21 535 aa16.07■□□□□ 0.16
TSPAN4-204ENST00000397404 CACNG2Q9Y698 323 aa16.07■□□□□ 0.16
TSPAN4-204ENST00000397404 FSTL3O95633 263 aa16.06■□□□□ 0.16
TSPAN4-204ENST00000397404 NAT1P18440 290 aa16.06■□□□□ 0.16
TSPAN4-204ENST00000397404 LMO1P25800 156 aa16.06■□□□□ 0.16
TSPAN4-204ENST00000397404 MRPS11P82912 194 aaKnown RBP16.06■□□□□ 0.16
TSPAN4-204ENST00000397404 KLF9Q13886 244 aaPredicted RBP16.06■□□□□ 0.16
TSPAN4-204ENST00000397404 MEF2DQ14814 521 aa16.06■□□□□ 0.16
TSPAN4-204ENST00000397404 ZMYND11Q15326 602 aa16.06■□□□□ 0.16
TSPAN4-204ENST00000397404 MPPED2Q15777 294 aa16.06■□□□□ 0.16
TSPAN4-204ENST00000397404 SIGIRRQ6IA17 410 aa16.06■□□□□ 0.16
TSPAN4-204ENST00000397404 LRRC29Q8WV35 223 aa16.06■□□□□ 0.16
TSPAN4-204ENST00000397404 RAB1BQ9H0U4 201 aa16.06■□□□□ 0.16
TSPAN4-204ENST00000397404 KLK11Q9UBX7 282 aa16.06■□□□□ 0.16
TSPAN4-204ENST00000397404 DEGS1O15121 323 aa16.05■□□□□ 0.16
TSPAN4-204ENST00000397404 PLAUP00749 431 aa16.05■□□□□ 0.16
TSPAN4-204ENST00000397404 AKAIN1P0CW23 69 aa16.05■□□□□ 0.16
TSPAN4-204ENST00000397404 MUC1P15941 1255 aaPredicted RBP16.05■□□□□ 0.16
TSPAN4-204ENST00000397404 NKAPLQ5M9Q1 402 aa16.05■□□□□ 0.16
TSPAN4-204ENST00000397404 OLFML2AQ68BL7 652 aa16.05■□□□□ 0.16
TSPAN4-204ENST00000397404 TRAPPC6BQ86SZ2 158 aa16.05■□□□□ 0.16
TSPAN4-204ENST00000397404 MOGAT3Q86VF5 341 aa16.05■□□□□ 0.16
TSPAN4-204ENST00000397404 PPP1R35Q8TAP8 253 aa16.05■□□□□ 0.16
TSPAN4-204ENST00000397404 CMSS1Q9BQ75 279 aaKnown RBP16.05■□□□□ 0.16
TSPAN4-204ENST00000397404 C12orf4Q9NQ89 552 aa16.05■□□□□ 0.16
TSPAN4-204ENST00000397404 UFSP2Q9NUQ7 469 aa16.05■□□□□ 0.16
TSPAN4-204ENST00000397404 KCNK7Q9Y2U2 307 aa16.05■□□□□ 0.16
TSPAN4-204ENST00000397404 CHD6Q8TD26 2715 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms