RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 LHFPL2Q6ZUX7 228 aa8.59□□□□□ -1.03
NEDD8-202ENST00000396828 KRT74Q7RTS7 529 aa8.59□□□□□ -1.03
NEDD8-202ENST00000396828 MOGAT3Q86VF5 341 aa8.59□□□□□ -1.03
NEDD8-202ENST00000396828 JAGN1Q8N5M9 183 aa8.59□□□□□ -1.03
NEDD8-202ENST00000396828 DNAAF1Q8NEP3 725 aa8.59□□□□□ -1.03
NEDD8-202ENST00000396828 OR8G5Q8NG78 346 aa8.59□□□□□ -1.03
NEDD8-202ENST00000396828 OR52N4Q8NGI2 321 aa8.59□□□□□ -1.03
NEDD8-202ENST00000396828 OR51A2Q8NGJ7 313 aa8.59□□□□□ -1.03
NEDD8-202ENST00000396828 KCTD12Q96CX2 325 aaKnown RBP8.59□□□□□ -1.03
NEDD8-202ENST00000396828 BORCS8Q96FH0 119 aa8.59□□□□□ -1.03
NEDD8-202ENST00000396828 GPER1Q99527 375 aa8.59□□□□□ -1.03
NEDD8-202ENST00000396828 UQCC2Q9BRT2 126 aa8.59□□□□□ -1.03
NEDD8-202ENST00000396828 BARHL1Q9BZE3 327 aa8.59□□□□□ -1.03
NEDD8-202ENST00000396828 SLIRPQ9GZT3 109 aaKnown RBP8.59□□□□□ -1.03
NEDD8-202ENST00000396828 C6orf62Q9GZU0 229 aaPredicted RBP8.59□□□□□ -1.03
NEDD8-202ENST00000396828 TMEM100Q9NV29 134 aa8.59□□□□□ -1.03
NEDD8-202ENST00000396828 A0A075B6Q4 140 aa8.58□□□□□ -1.04
NEDD8-202ENST00000396828 TRAV40A0A0B4J280 105 aa8.58□□□□□ -1.04
NEDD8-202ENST00000396828 IGHV2-70DA0A0C4DH43 119 aa8.58□□□□□ -1.04
NEDD8-202ENST00000396828 IGKV1-9A0A0C4DH69 117 aa8.58□□□□□ -1.04
NEDD8-202ENST00000396828 A0A0G2JK05 382 aa8.58□□□□□ -1.04
NEDD8-202ENST00000396828 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.58□□□□□ -1.04
NEDD8-202ENST00000396828 FAM230AA0A1W2PPH8 454 aa8.58□□□□□ -1.04
NEDD8-202ENST00000396828 CLPXO76031 633 aa8.58□□□□□ -1.04
NEDD8-202ENST00000396828 PLATP00750 562 aa8.58□□□□□ -1.04
NEDD8-202ENST00000396828 RPS2P15880 293 aaKnown RBP8.58□□□□□ -1.04
NEDD8-202ENST00000396828 CA6P23280 308 aa8.58□□□□□ -1.04
NEDD8-202ENST00000396828 HTR2CP28335 458 aa8.58□□□□□ -1.04
NEDD8-202ENST00000396828 RBP2P50120 134 aa8.58□□□□□ -1.04
NEDD8-202ENST00000396828 FUT6P51993 359 aa8.58□□□□□ -1.04
NEDD8-202ENST00000396828 ATP1B3P54709 279 aa8.58□□□□□ -1.04
NEDD8-202ENST00000396828 MTCP1P56278 107 aa8.58□□□□□ -1.04
NEDD8-202ENST00000396828 MZT1Q08AG7 82 aa8.58□□□□□ -1.04
NEDD8-202ENST00000396828 MAB21L1Q13394 359 aa8.58□□□□□ -1.04
NEDD8-202ENST00000396828 DYNC1I2Q13409 638 aaKnown RBP8.58□□□□□ -1.04
NEDD8-202ENST00000396828 KISS1Q15726 138 aa8.58□□□□□ -1.04
NEDD8-202ENST00000396828 RAB11BQ15907 218 aa8.58□□□□□ -1.04
NEDD8-202ENST00000396828 CEACAM21Q3KPI0 293 aa8.58□□□□□ -1.04
NEDD8-202ENST00000396828 HES5Q5TA89 166 aa8.58□□□□□ -1.04
NEDD8-202ENST00000396828 BRD3OSQ6XYD6 125 aa8.58□□□□□ -1.04
NEDD8-202ENST00000396828 ZNF841Q6ZN19 808 aa8.58□□□□□ -1.04
NEDD8-202ENST00000396828 NR2C2APQ86WQ0 139 aa8.58□□□□□ -1.04
NEDD8-202ENST00000396828 OR6M1Q8NGM8 313 aa8.58□□□□□ -1.04
NEDD8-202ENST00000396828 OR13G1Q8NGZ3 307 aa8.58□□□□□ -1.04
NEDD8-202ENST00000396828 OR8S1Q8NH09 359 aa8.58□□□□□ -1.04
NEDD8-202ENST00000396828 ZNF671Q8TAW3 534 aa8.58□□□□□ -1.04
NEDD8-202ENST00000396828 TRMT10AQ8TBZ6 339 aaKnown RBP8.58□□□□□ -1.04
NEDD8-202ENST00000396828 NPRL2Q8WTW4 380 aa8.58□□□□□ -1.04
NEDD8-202ENST00000396828 RAB40AQ8WXH6 277 aa8.58□□□□□ -1.04
NEDD8-202ENST00000396828 UPRTQ96BW1 309 aa8.58□□□□□ -1.04
NEDD8-202ENST00000396828 S100A13Q99584 98 aa8.58□□□□□ -1.04
NEDD8-202ENST00000396828 GFI1Q99684 422 aa8.58□□□□□ -1.04
NEDD8-202ENST00000396828 MICU1Q9BPX6 476 aa8.58□□□□□ -1.04
NEDD8-202ENST00000396828 SLC30A2Q9BRI3 323 aa8.58□□□□□ -1.04
NEDD8-202ENST00000396828 SSBP3Q9BWW4 388 aaPredicted RBP8.58□□□□□ -1.04
NEDD8-202ENST00000396828 MS4A7Q9GZW8 240 aaPredicted RBP8.58□□□□□ -1.04
NEDD8-202ENST00000396828 NXF2Q9GZY0 626 aaKnown RBP8.58□□□□□ -1.04
NEDD8-202ENST00000396828 ABRACLQ9P1F3 81 aa8.58□□□□□ -1.04
NEDD8-202ENST00000396828 OR5V1Q9UGF6 321 aa8.58□□□□□ -1.04
NEDD8-202ENST00000396828 STEAP1Q9UHE8 339 aa8.58□□□□□ -1.04
NEDD8-202ENST00000396828 A0A1B0GWJ7 208 aa8.57□□□□□ -1.04
NEDD8-202ENST00000396828 OR5B21A6NL26 309 aa8.57□□□□□ -1.04
NEDD8-202ENST00000396828 SLC17A2O00624 439 aa8.57□□□□□ -1.04
NEDD8-202ENST00000396828 RGS5O15539 181 aa8.57□□□□□ -1.04
NEDD8-202ENST00000396828 HOXA3O43365 443 aaPredicted RBP8.57□□□□□ -1.04
NEDD8-202ENST00000396828 CALCBP10092 127 aa8.57□□□□□ -1.04
NEDD8-202ENST00000396828 CD37P11049 281 aa8.57□□□□□ -1.04
NEDD8-202ENST00000396828 SLC2A2P11168 524 aaPredicted RBP8.57□□□□□ -1.04
NEDD8-202ENST00000396828 SCAND1P57086 179 aa8.57□□□□□ -1.04
NEDD8-202ENST00000396828 GNB2P62879 340 aa8.57□□□□□ -1.04
NEDD8-202ENST00000396828 OR8G1Q15617 311 aa8.57□□□□□ -1.04
NEDD8-202ENST00000396828 MPPED2Q15777 294 aa8.57□□□□□ -1.04
NEDD8-202ENST00000396828 DEFB112Q30KQ8 113 aa8.57□□□□□ -1.04
NEDD8-202ENST00000396828 PRAMEF6Q5VXH4 476 aa8.57□□□□□ -1.04
NEDD8-202ENST00000396828 TREML4Q6UXN2 200 aa8.57□□□□□ -1.04
NEDD8-202ENST00000396828 LINC00299Q6ZSB3 139 aa8.57□□□□□ -1.04
NEDD8-202ENST00000396828 C9orf139Q6ZV77 190 aa8.57□□□□□ -1.04
NEDD8-202ENST00000396828 MUC20Q8N307 709 aaPredicted RBP8.57□□□□□ -1.04
NEDD8-202ENST00000396828 SPERTQ8NA61 448 aa8.57□□□□□ -1.04
NEDD8-202ENST00000396828 OR5A2Q8NGI9 324 aa8.57□□□□□ -1.04
NEDD8-202ENST00000396828 OR5P3Q8WZ94 311 aa8.57□□□□□ -1.04
NEDD8-202ENST00000396828 SLC25A28Q96A46 364 aa8.57□□□□□ -1.04
NEDD8-202ENST00000396828 CEP19Q96LK0 163 aa8.57□□□□□ -1.04
NEDD8-202ENST00000396828 TSC22D3Q99576 134 aa8.57□□□□□ -1.04
NEDD8-202ENST00000396828 ADAT1Q9BUB4 502 aaKnown RBP8.57□□□□□ -1.04
NEDD8-202ENST00000396828 RTL8AQ9BWD3 113 aa8.57□□□□□ -1.04
NEDD8-202ENST00000396828 LIN7BQ9HAP6 207 aa8.57□□□□□ -1.04
NEDD8-202ENST00000396828 SMURF1Q9HCE7 757 aa8.57□□□□□ -1.04
NEDD8-202ENST00000396828 TNFRSF19Q9NS68 423 aa8.57□□□□□ -1.04
NEDD8-202ENST00000396828 ADAM30Q9UKF2 790 aa8.57□□□□□ -1.04
NEDD8-202ENST00000396828 PEX16Q9Y5Y5 336 aa8.57□□□□□ -1.04
NEDD8-202ENST00000396828 KIR2DS1A0A191URI9 304 aa8.56□□□□□ -1.04
NEDD8-202ENST00000396828 C22orf46C9J442 243 aa8.56□□□□□ -1.04
NEDD8-202ENST00000396828 CLDN34H7C241 214 aa8.56□□□□□ -1.04
NEDD8-202ENST00000396828 FCN3O75636 299 aa8.56□□□□□ -1.04
NEDD8-202ENST00000396828 UBBP0CG47 229 aa8.56□□□□□ -1.04
NEDD8-202ENST00000396828 PPIAL4GP0DN37 164 aa8.56□□□□□ -1.04
NEDD8-202ENST00000396828 ARSBP15848 533 aa8.56□□□□□ -1.04
NEDD8-202ENST00000396828 BMXP51813 675 aa8.56□□□□□ -1.04
NEDD8-202ENST00000396828 GNG3P63215 75 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms