RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 ARIH2OSQ8N7S6 290 aa9.27□□□□□ -0.93
COL4A4-201ENST00000396625 KLF16Q9BXK1 252 aaPredicted RBP9.27□□□□□ -0.93
COL4A4-201ENST00000396625 RASL12Q9NYN1 266 aa9.27□□□□□ -0.93
COL4A4-201ENST00000396625 PLEKHB1Q9UF11 243 aaPredicted RBP9.27□□□□□ -0.93
COL4A4-201ENST00000396625 WNK1Q9H4A3 2382 aa9.27□□□□□ -0.93
COL4A4-201ENST00000396625 MRPL54Q6P161 138 aaKnown RBP9.26□□□□□ -0.93
COL4A4-201ENST00000396625 LTB4R2Q9NPC1 389 aa9.26□□□□□ -0.93
COL4A4-201ENST00000396625 COA4Q9NYJ1 87 aa9.26□□□□□ -0.93
COL4A4-201ENST00000396625 A4GNTQ9UNA3 340 aa9.26□□□□□ -0.93
COL4A4-201ENST00000396625 MNX1P50219 401 aaPredicted RBP9.26□□□□□ -0.93
COL4A4-201ENST00000396625 AESQ08117 197 aa9.26□□□□□ -0.93
COL4A4-201ENST00000396625 PLPP1O14494 284 aa9.26□□□□□ -0.93
COL4A4-201ENST00000396625 PLXNB1O43157 2135 aa9.26□□□□□ -0.93
COL4A4-201ENST00000396625 ZNF253O75346 499 aa9.26□□□□□ -0.93
COL4A4-201ENST00000396625 ACTL6AO96019 429 aa9.26□□□□□ -0.93
COL4A4-201ENST00000396625 IL2RAP01589 272 aa9.26□□□□□ -0.93
COL4A4-201ENST00000396625 PPP1CCP36873 323 aaKnown RBP9.26□□□□□ -0.93
COL4A4-201ENST00000396625 FAM74A3Q4VXF1 159 aa9.26□□□□□ -0.93
COL4A4-201ENST00000396625 C12orf54Q6X4T0 127 aa9.26□□□□□ -0.93
COL4A4-201ENST00000396625 ST8SIA1Q92185 356 aa9.26□□□□□ -0.93
COL4A4-201ENST00000396625 RPEQ96AT9 228 aa9.26□□□□□ -0.93
COL4A4-201ENST00000396625 SNRNP40Q96DI7 357 aaKnown RBP9.26□□□□□ -0.93
COL4A4-201ENST00000396625 KTI12Q96EK9 354 aaPredicted RBP9.26□□□□□ -0.93
COL4A4-201ENST00000396625 C20orf27Q9GZN8 174 aa9.26□□□□□ -0.93
COL4A4-201ENST00000396625 CNTD2Q9H8S5 307 aa9.26□□□□□ -0.93
COL4A4-201ENST00000396625 FCGR3BO75015 233 aa9.26□□□□□ -0.93
COL4A4-201ENST00000396625 DNAL4O96015 105 aa9.26□□□□□ -0.93
COL4A4-201ENST00000396625 BRS3P32247 399 aa9.26□□□□□ -0.93
COL4A4-201ENST00000396625 FUT7Q11130 342 aa9.26□□□□□ -0.93
COL4A4-201ENST00000396625 FZD2Q14332 565 aa9.26□□□□□ -0.93
COL4A4-201ENST00000396625 SARGQ9BW04 601 aa9.26□□□□□ -0.93
COL4A4-201ENST00000396625 FOXJ3Q9UPW0 622 aa9.26□□□□□ -0.93
COL4A4-201ENST00000396625 MRPS16Q9Y3D3 137 aaKnown RBP9.26□□□□□ -0.93
COL4A4-201ENST00000396625 RBBP6Q7Z6E9 1792 aaKnown RBP9.26□□□□□ -0.93
COL4A4-201ENST00000396625 LANCL1O43813 399 aa9.26□□□□□ -0.93
COL4A4-201ENST00000396625 GABRA1P14867 456 aa9.26□□□□□ -0.93
COL4A4-201ENST00000396625 COL19A1Q14993 1142 aa9.26□□□□□ -0.93
COL4A4-201ENST00000396625 PRSS36Q5K4E3 855 aa9.26□□□□□ -0.93
COL4A4-201ENST00000396625 OR2W5A6NFC9 320 aa9.26□□□□□ -0.93
COL4A4-201ENST00000396625 SMPD2O60906 423 aa9.26□□□□□ -0.93
COL4A4-201ENST00000396625 HIST1H1EP10412 219 aaKnown RBP9.26□□□□□ -0.93
COL4A4-201ENST00000396625 C19orf57Q0VDD7 668 aa9.26□□□□□ -0.93
COL4A4-201ENST00000396625 SELENBP1Q13228 472 aa9.26□□□□□ -0.93
COL4A4-201ENST00000396625 ABHD17CQ6PCB6 329 aa9.26□□□□□ -0.93
COL4A4-201ENST00000396625 SYS1Q8N2H4 156 aa9.26□□□□□ -0.93
COL4A4-201ENST00000396625 FGF13Q92913 245 aa9.26□□□□□ -0.93
COL4A4-201ENST00000396625 APOBEC3DQ96AK3 386 aaPredicted RBP9.26□□□□□ -0.93
COL4A4-201ENST00000396625 PERPQ96FX8 193 aa9.26□□□□□ -0.93
COL4A4-201ENST00000396625 FGF21Q9NSA1 209 aa9.26□□□□□ -0.93
COL4A4-201ENST00000396625 THYN1Q9P016 225 aa9.26□□□□□ -0.93
COL4A4-201ENST00000396625 AMMECR1Q9Y4X0 333 aaPredicted RBP9.26□□□□□ -0.93
COL4A4-201ENST00000396625 GREB1Q4ZG55 1949 aa9.26□□□□□ -0.93
COL4A4-201ENST00000396625 IGHV3-20A0A0C4DH32 117 aa9.26□□□□□ -0.93
COL4A4-201ENST00000396625 SRSF10O75494 262 aaKnown RBP9.26□□□□□ -0.93
COL4A4-201ENST00000396625 MBPP02686 304 aaPredicted RBP9.26□□□□□ -0.93
COL4A4-201ENST00000396625 PPP1R1AQ13522 171 aa9.26□□□□□ -0.93
COL4A4-201ENST00000396625 VWA2Q5GFL6 755 aa9.26□□□□□ -0.93
COL4A4-201ENST00000396625 ADTRPQ96IZ2 230 aa9.26□□□□□ -0.93
COL4A4-201ENST00000396625 WNK3Q9BYP7 1800 aa9.26□□□□□ -0.93
COL4A4-201ENST00000396625 PFN3P60673 137 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 PRSS8Q16651 343 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 CBLN2Q8IUK8 224 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 ATOH1Q92858 354 aaPredicted RBP9.25□□□□□ -0.93
COL4A4-201ENST00000396625 PLXNA1Q9UIW2 1896 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 MED13LQ71F56 2210 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 PLXNB2O15031 1838 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 PTPRDP23468 1912 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 J3KRW8 73 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 PTGESO14684 152 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 MICBQ29980 383 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 BSXQ3C1V8 233 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 ZNF766Q5HY98 468 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 C6orf15Q6UXA7 325 aaPredicted RBP9.25□□□□□ -0.93
COL4A4-201ENST00000396625 PELI3Q8N2H9 469 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 KISS1RQ969F8 398 aaPredicted RBP9.25□□□□□ -0.93
COL4A4-201ENST00000396625 FAM117AQ9C073 453 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 LAT2Q9GZY6 243 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 SLC17A5Q9NRA2 495 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 PRSS50Q9UI38 385 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 MOB4Q9Y3A3 225 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 OR5AC1P0C628 307 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 COX19Q49B96 90 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 DMRTC1Q5HYR2 192 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 MRM1Q6IN84 353 aaKnown RBP9.25□□□□□ -0.93
COL4A4-201ENST00000396625 ACSM5Q6NUN0 579 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 ZNF683Q8IZ20 524 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 ABHD3Q8WU67 409 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 RLN3Q8WXF3 142 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 ZNF764Q96H86 408 aaPredicted RBP9.25□□□□□ -0.93
COL4A4-201ENST00000396625 SGK494Q96LW2 274 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 NUDT16L1Q9BRJ7 211 aaKnown RBP9.25□□□□□ -0.93
COL4A4-201ENST00000396625 SCN7AQ01118 1682 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 KCPQ6ZWJ8 1503 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 NDUFB6O95139 128 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 MPC2O95563 127 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 HPXP02790 462 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 PGA4P0DJD7 388 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 PGA5P0DJD9 388 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 FUT3P21217 361 aa9.25□□□□□ -0.93
COL4A4-201ENST00000396625 ST3GAL2Q16842 350 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms