RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 LANCL1O43813 399 aa12.47□□□□□ -0.41
COL4A3-202ENST00000396578 ZXDAP98168 799 aa12.47□□□□□ -0.41
COL4A3-202ENST00000396578 NCMAPQ5T1S8 102 aa12.47□□□□□ -0.41
COL4A3-202ENST00000396578 JMJD6Q6NYC1 403 aaPredicted RBP12.47□□□□□ -0.41
COL4A3-202ENST00000396578 OR4C3Q8NH37 302 aa12.47□□□□□ -0.41
COL4A3-202ENST00000396578 STARD4Q96DR4 205 aa12.47□□□□□ -0.41
COL4A3-202ENST00000396578 DEFB108AA8MXU0 73 aa12.47□□□□□ -0.41
COL4A3-202ENST00000396578 EPPINO95925 133 aa12.47□□□□□ -0.41
COL4A3-202ENST00000396578 ACAA1P09110 424 aaPredicted RBP12.47□□□□□ -0.41
COL4A3-202ENST00000396578 BSXQ3C1V8 233 aa12.47□□□□□ -0.41
COL4A3-202ENST00000396578 KMT5CQ86Y97 462 aa12.47□□□□□ -0.41
COL4A3-202ENST00000396578 TMEM251Q8N6I4 163 aa12.47□□□□□ -0.41
COL4A3-202ENST00000396578 MYOZ3Q8TDC0 251 aa12.47□□□□□ -0.41
COL4A3-202ENST00000396578 SPACA9Q96E40 222 aaPredicted RBP12.47□□□□□ -0.41
COL4A3-202ENST00000396578 ASB16Q96NS5 453 aa12.47□□□□□ -0.41
COL4A3-202ENST00000396578 CSN3P07498 182 aa12.47□□□□□ -0.41
COL4A3-202ENST00000396578 DLX1P56177 255 aa12.47□□□□□ -0.41
COL4A3-202ENST00000396578 LYZP61626 148 aa12.47□□□□□ -0.41
COL4A3-202ENST00000396578 IL24Q13007 206 aa12.47□□□□□ -0.41
COL4A3-202ENST00000396578 C21orf62-AS1Q17RA5 79 aa12.47□□□□□ -0.41
COL4A3-202ENST00000396578 ZNF343Q6P1L6 599 aa12.47□□□□□ -0.41
COL4A3-202ENST00000396578 NUFIP2Q7Z417 695 aaKnown RBP12.47□□□□□ -0.41
COL4A3-202ENST00000396578 LIPGQ9Y5X9 500 aa12.47□□□□□ -0.41
COL4A3-202ENST00000396578 KLF7O75840 302 aaPredicted RBP12.47□□□□□ -0.41
COL4A3-202ENST00000396578 NHLRC1Q6VVB1 395 aa12.47□□□□□ -0.41
COL4A3-202ENST00000396578 UBALD1Q8TB05 177 aa12.47□□□□□ -0.41
COL4A3-202ENST00000396578 FOXB1Q99853 325 aa12.47□□□□□ -0.41
COL4A3-202ENST00000396578 PRSS50Q9UI38 385 aa12.47□□□□□ -0.41
COL4A3-202ENST00000396578 PDE6DO43924 150 aa12.47□□□□□ -0.41
COL4A3-202ENST00000396578 ZNF253O75346 499 aa12.47□□□□□ -0.41
COL4A3-202ENST00000396578 P01737 135 aa12.47□□□□□ -0.41
COL4A3-202ENST00000396578 OR3A4PP47883 348 aa12.47□□□□□ -0.41
COL4A3-202ENST00000396578 TMEM33P57088 247 aa12.47□□□□□ -0.41
COL4A3-202ENST00000396578 TMEM65Q6PI78 240 aa12.47□□□□□ -0.41
COL4A3-202ENST00000396578 RBPMS2Q6ZRY4 209 aaKnown RBP12.47□□□□□ -0.41
COL4A3-202ENST00000396578 OR2A5Q96R48 311 aa12.47□□□□□ -0.41
COL4A3-202ENST00000396578 EXOGQ9Y2C4 368 aaKnown RBP12.47□□□□□ -0.41
COL4A3-202ENST00000396578 LEUTXA8MZ59 168 aa12.46□□□□□ -0.41
COL4A3-202ENST00000396578 K7ESF4 209 aa12.46□□□□□ -0.41
COL4A3-202ENST00000396578 ARG1P05089 322 aa12.46□□□□□ -0.41
COL4A3-202ENST00000396578 CD81P60033 236 aa12.46□□□□□ -0.41
COL4A3-202ENST00000396578 UBE2L3P68036 154 aaKnown RBP12.46□□□□□ -0.41
COL4A3-202ENST00000396578 HLA-BQ31612 363 aa12.46□□□□□ -0.41
COL4A3-202ENST00000396578 OR52L2PQ8NGH6 319 aa12.46□□□□□ -0.41
COL4A3-202ENST00000396578 NPEPL1Q8NDH3 523 aa12.46□□□□□ -0.41
COL4A3-202ENST00000396578 PLPPR2Q96GM1 343 aa12.46□□□□□ -0.41
COL4A3-202ENST00000396578 ZMIZ1Q9ULJ6 1067 aa12.46□□□□□ -0.41
COL4A3-202ENST00000396578 ISLRO14498 428 aa12.46□□□□□ -0.41
COL4A3-202ENST00000396578 PGA4P0DJD7 388 aa12.46□□□□□ -0.41
COL4A3-202ENST00000396578 PGA5P0DJD9 388 aa12.46□□□□□ -0.41
COL4A3-202ENST00000396578 CCR5P51681 352 aa12.46□□□□□ -0.41
COL4A3-202ENST00000396578 XAF1Q6GPH4 301 aa12.46□□□□□ -0.41
COL4A3-202ENST00000396578 RNF165Q6ZSG1 346 aa12.46□□□□□ -0.41
COL4A3-202ENST00000396578 LINC00615Q96LM1 132 aaPredicted RBP12.46□□□□□ -0.41
COL4A3-202ENST00000396578 ELOVL1Q9BW60 279 aa12.46□□□□□ -0.41
COL4A3-202ENST00000396578 SIRT7Q9NRC8 400 aa12.46□□□□□ -0.41
COL4A3-202ENST00000396578 PAM16Q9Y3D7 125 aa12.46□□□□□ -0.41
COL4A3-202ENST00000396578 CORTO00230 105 aa12.46□□□□□ -0.41
COL4A3-202ENST00000396578 HTRA3P83110 453 aa12.46□□□□□ -0.41
COL4A3-202ENST00000396578 PARM1Q6UWI2 310 aa12.46□□□□□ -0.41
COL4A3-202ENST00000396578 ZNF547Q8IVP9 402 aa12.46□□□□□ -0.41
COL4A3-202ENST00000396578 ALG1L2C9J202 215 aa12.46□□□□□ -0.42
COL4A3-202ENST00000396578 M0R3E3 92 aa12.46□□□□□ -0.42
COL4A3-202ENST00000396578 PRKNO60260 465 aaPredicted RBP12.46□□□□□ -0.42
COL4A3-202ENST00000396578 VEGFBP49765 207 aa12.46□□□□□ -0.42
COL4A3-202ENST00000396578 DLK1P80370 383 aa12.46□□□□□ -0.42
COL4A3-202ENST00000396578 C6orf201Q7Z4U5 140 aa12.46□□□□□ -0.42
COL4A3-202ENST00000396578 PERPQ96FX8 193 aa12.46□□□□□ -0.42
COL4A3-202ENST00000396578 MFRPQ9BY79 579 aa12.46□□□□□ -0.42
COL4A3-202ENST00000396578 FAM117AQ9C073 453 aa12.46□□□□□ -0.42
COL4A3-202ENST00000396578 GCSHP23434 173 aa12.46□□□□□ -0.42
COL4A3-202ENST00000396578 FAHD2BQ6P2I3 314 aaPredicted RBP12.46□□□□□ -0.42
COL4A3-202ENST00000396578 FAHD2AQ96GK7 314 aa12.46□□□□□ -0.42
COL4A3-202ENST00000396578 TNFRSF12AQ9NP84 129 aa12.46□□□□□ -0.42
COL4A3-202ENST00000396578 TECRQ9NZ01 308 aaKnown RBP12.46□□□□□ -0.42
COL4A3-202ENST00000396578 SIGLEC7Q9Y286 467 aa12.46□□□□□ -0.42
COL4A3-202ENST00000396578 VAX2Q9UIW0 290 aa12.45□□□□□ -0.42
COL4A3-202ENST00000396578 HEATR1Q9H583 2144 aaKnown RBP12.45□□□□□ -0.42
COL4A3-202ENST00000396578 COL16A1Q07092 1604 aaPredicted RBP12.45□□□□□ -0.42
COL4A3-202ENST00000396578 ZFPL1O95159 310 aa12.45□□□□□ -0.42
COL4A3-202ENST00000396578 DPPA3Q6W0C5 159 aa12.45□□□□□ -0.42
COL4A3-202ENST00000396578 ZNF383Q8NA42 475 aa12.45□□□□□ -0.42
COL4A3-202ENST00000396578 MIOXQ9UGB7 285 aa12.45□□□□□ -0.42
COL4A3-202ENST00000396578 LPAR5Q9H1C0 372 aa12.45□□□□□ -0.42
COL4A3-202ENST00000396578 RHBDL1O75783 438 aa12.45□□□□□ -0.42
COL4A3-202ENST00000396578 CA6P23280 308 aa12.45□□□□□ -0.42
COL4A3-202ENST00000396578 P2RY1P47900 373 aa12.45□□□□□ -0.42
COL4A3-202ENST00000396578 HSD17B13Q7Z5P4 300 aaPredicted RBP12.45□□□□□ -0.42
COL4A3-202ENST00000396578 PIK3IP1Q96FE7 263 aa12.45□□□□□ -0.42
COL4A3-202ENST00000396578 OR4C46A6NHA9 309 aa12.45□□□□□ -0.42
COL4A3-202ENST00000396578 APCSP02743 223 aa12.45□□□□□ -0.42
COL4A3-202ENST00000396578 GPR3P46089 330 aa12.45□□□□□ -0.42
COL4A3-202ENST00000396578 HFEQ30201 348 aa12.45□□□□□ -0.42
COL4A3-202ENST00000396578 WDR74Q6RFH5 385 aaPredicted RBP12.45□□□□□ -0.42
COL4A3-202ENST00000396578 OR8A1Q8NGG7 326 aa12.45□□□□□ -0.42
COL4A3-202ENST00000396578 DOCK1Q14185 1865 aa12.45□□□□□ -0.42
COL4A3-202ENST00000396578 CABIN1Q9Y6J0 2220 aa12.45□□□□□ -0.42
COL4A3-202ENST00000396578 A0A0B4J2E0 115 aa12.45□□□□□ -0.42
COL4A3-202ENST00000396578 A0A1B0GX12 115 aa12.45□□□□□ -0.42
COL4A3-202ENST00000396578 TRAF4Q9BUZ4 470 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms