RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 SRSF7Q16629 238 aaKnown RBP eCLIP14.45□□□□□ -0.1
NUP50-202ENST00000396096 ATP1A1-AS1Q5TC04 95 aa14.45□□□□□ -0.1
NUP50-202ENST00000396096 Q6ZS49 121 aa14.45□□□□□ -0.1
NUP50-202ENST00000396096 TMEM178AQ8NBL3 297 aa14.45□□□□□ -0.1
NUP50-202ENST00000396096 DYRK2Q92630 601 aa14.45□□□□□ -0.1
NUP50-202ENST00000396096 MARS2Q96GW9 593 aaKnown RBP14.45□□□□□ -0.1
NUP50-202ENST00000396096 C1QTNF6Q9BXI9 259 aa14.45□□□□□ -0.1
NUP50-202ENST00000396096 STARD10Q9Y365 291 aa14.45□□□□□ -0.1
NUP50-202ENST00000396096 ZNF175Q9Y473 711 aa14.45□□□□□ -0.1
NUP50-202ENST00000396096 DNAJC13O75165 2243 aa14.45□□□□□ -0.1
NUP50-202ENST00000396096 TRGV5A0A0B4J1U4 118 aa14.44□□□□□ -0.1
NUP50-202ENST00000396096 ZNF728P0DKX0 622 aa14.44□□□□□ -0.1
NUP50-202ENST00000396096 CCL2P13500 99 aa14.44□□□□□ -0.1
NUP50-202ENST00000396096 NPBWR2P48146 333 aa14.44□□□□□ -0.1
NUP50-202ENST00000396096 FAM209AQ5JX71 171 aa14.44□□□□□ -0.1
NUP50-202ENST00000396096 SLC22A25Q6T423 547 aa14.44□□□□□ -0.1
NUP50-202ENST00000396096 NAXEQ8NCW5 288 aa14.44□□□□□ -0.1
NUP50-202ENST00000396096 OR1K1Q8NGR3 316 aa14.44□□□□□ -0.1
NUP50-202ENST00000396096 SUN5Q8TC36 379 aa14.44□□□□□ -0.1
NUP50-202ENST00000396096 GALNT14Q96FL9 552 aa14.44□□□□□ -0.1
NUP50-202ENST00000396096 LINC00052Q96N35 136 aa14.44□□□□□ -0.1
NUP50-202ENST00000396096 SHARPINQ9H0F6 387 aa14.44□□□□□ -0.1
NUP50-202ENST00000396096 DEFB127Q9H1M4 99 aa14.44□□□□□ -0.1
NUP50-202ENST00000396096 CRIM1Q9NZV1 1036 aa14.44□□□□□ -0.1
NUP50-202ENST00000396096 SPRR3Q9UBC9 169 aa14.44□□□□□ -0.1
NUP50-202ENST00000396096 PRSS50Q9UI38 385 aa14.44□□□□□ -0.1
NUP50-202ENST00000396096 GALR2O43603 387 aaPredicted RBP14.44□□□□□ -0.1
NUP50-202ENST00000396096 HOXB5P09067 269 aa14.44□□□□□ -0.1
NUP50-202ENST00000396096 NUP62P37198 522 aaPredicted RBP14.44□□□□□ -0.1
NUP50-202ENST00000396096 FGF12P61328 243 aa14.44□□□□□ -0.1
NUP50-202ENST00000396096 ARG2P78540 354 aa14.44□□□□□ -0.1
NUP50-202ENST00000396096 RAB32Q13637 225 aa14.44□□□□□ -0.1
NUP50-202ENST00000396096 RNFT1Q5M7Z0 435 aa14.44□□□□□ -0.1
NUP50-202ENST00000396096 FAM74A1Q5RGS3 127 aa14.44□□□□□ -0.1
NUP50-202ENST00000396096 FBXW9Q5XUX1 488 aa14.44□□□□□ -0.1
NUP50-202ENST00000396096 BRICD5Q6PL45 260 aa14.44□□□□□ -0.1
NUP50-202ENST00000396096 Q6ZPA2 131 aa14.44□□□□□ -0.1
NUP50-202ENST00000396096 SUMF1Q8NBK3 374 aa14.44□□□□□ -0.1
NUP50-202ENST00000396096 SLC30A7Q8NEW0 376 aa14.44□□□□□ -0.1
NUP50-202ENST00000396096 OR5A2Q8NGI9 324 aa14.44□□□□□ -0.1
NUP50-202ENST00000396096 BCL2L2Q92843 193 aaPredicted RBP14.44□□□□□ -0.1
NUP50-202ENST00000396096 LDAHQ9H6V9 325 aa14.44□□□□□ -0.1
NUP50-202ENST00000396096 CYTL1Q9NRR1 136 aa14.44□□□□□ -0.1
NUP50-202ENST00000396096 OR5AC2Q9NZP5 309 aa14.44□□□□□ -0.1
NUP50-202ENST00000396096 TUBD1Q9UJT1 453 aa14.44□□□□□ -0.1
NUP50-202ENST00000396096 CDRT15L2A8MXV6 281 aa14.43□□□□□ -0.1
NUP50-202ENST00000396096 IL18BPO95998 194 aa14.43□□□□□ -0.1
NUP50-202ENST00000396096 NGFP01138 241 aa14.43□□□□□ -0.1
NUP50-202ENST00000396096 TPT1P13693 172 aaKnown RBP14.43□□□□□ -0.1
NUP50-202ENST00000396096 BCL3P20749 454 aa14.43□□□□□ -0.1
NUP50-202ENST00000396096 LRTM2Q8N967 370 aa14.43□□□□□ -0.1
NUP50-202ENST00000396096 MOB3AQ96BX8 217 aa14.43□□□□□ -0.1
NUP50-202ENST00000396096 ZNF552Q9H707 407 aaPredicted RBP14.43□□□□□ -0.1
NUP50-202ENST00000396096 ZNF442Q9H7R0 627 aa14.43□□□□□ -0.1
NUP50-202ENST00000396096 NAA60Q9H7X0 242 aa14.43□□□□□ -0.1
NUP50-202ENST00000396096 PLSCR2Q9NRY7 297 aa14.43□□□□□ -0.1
NUP50-202ENST00000396096 RCC2Q9P258 522 aaKnown RBP14.43□□□□□ -0.1
NUP50-202ENST00000396096 SLC22A20A6NK97 555 aa14.42□□□□□ -0.1
NUP50-202ENST00000396096 KCNAB3O43448 404 aa14.42□□□□□ -0.1
NUP50-202ENST00000396096 OR7C1O76099 320 aaPredicted RBP14.42□□□□□ -0.1
NUP50-202ENST00000396096 PIGPP57054 158 aa14.42□□□□□ -0.1
NUP50-202ENST00000396096 MKXQ8IYA7 352 aa14.42□□□□□ -0.1
NUP50-202ENST00000396096 BHLHE23Q8NDY6 225 aa14.42□□□□□ -0.1
NUP50-202ENST00000396096 NANOS1Q8WY41 292 aaKnown RBP14.42□□□□□ -0.1
NUP50-202ENST00000396096 SLAMF9Q96A28 289 aa14.42□□□□□ -0.1
NUP50-202ENST00000396096 KCNIP3Q9Y2W7 256 aa14.42□□□□□ -0.1
NUP50-202ENST00000396096 FAM221AA4D161 298 aa14.42□□□□□ -0.1
NUP50-202ENST00000396096 CD300LBA8K4G0 201 aa14.42□□□□□ -0.1
NUP50-202ENST00000396096 B8ZZF3 427 aa14.42□□□□□ -0.1
NUP50-202ENST00000396096 FGF16O43320 207 aa14.42□□□□□ -0.1
NUP50-202ENST00000396096 FCGR2CP31995 323 aa14.42□□□□□ -0.1
NUP50-202ENST00000396096 APLNRP35414 380 aa14.42□□□□□ -0.1
NUP50-202ENST00000396096 HAAOP46952 286 aa14.42□□□□□ -0.1
NUP50-202ENST00000396096 TNFSF10P50591 281 aa14.42□□□□□ -0.1
NUP50-202ENST00000396096 GPM6AP51674 278 aa14.42□□□□□ -0.1
NUP50-202ENST00000396096 TMEM187Q14656 261 aa14.42□□□□□ -0.1
NUP50-202ENST00000396096 MPV17LQ2QL34 196 aa14.42□□□□□ -0.1
NUP50-202ENST00000396096 BAP18Q8IXM2 172 aa14.42□□□□□ -0.1
NUP50-202ENST00000396096 SLC38A6Q8IZM9 456 aa14.42□□□□□ -0.1
NUP50-202ENST00000396096 CCDC120Q96HB5 630 aa14.42□□□□□ -0.1
NUP50-202ENST00000396096 CNTNAP3BQ96NU0 1288 aa14.42□□□□□ -0.1
NUP50-202ENST00000396096 SUCNR1Q9BXA5 334 aa14.42□□□□□ -0.1
NUP50-202ENST00000396096 CNTNAP3Q9BZ76 1288 aa14.42□□□□□ -0.1
NUP50-202ENST00000396096 MPC1Q9Y5U8 109 aa14.42□□□□□ -0.1
NUP50-202ENST00000396096 MSGN1A6NI15 193 aa14.41□□□□□ -0.1
NUP50-202ENST00000396096 ZSCAN5BA6NJL1 495 aa14.41□□□□□ -0.1
NUP50-202ENST00000396096 ZNF732B4DXR9 585 aa14.41□□□□□ -0.1
NUP50-202ENST00000396096 IFNA21P01568 189 aa14.41□□□□□ -0.1
NUP50-202ENST00000396096 WNT5AP41221 380 aa14.41□□□□□ -0.1
NUP50-202ENST00000396096 GLP1RP43220 463 aa14.41□□□□□ -0.1
NUP50-202ENST00000396096 CLN3Q13286 438 aa14.41□□□□□ -0.1
NUP50-202ENST00000396096 PDCD1Q15116 288 aa14.41□□□□□ -0.1
NUP50-202ENST00000396096 IAH1Q2TAA2 248 aaPredicted RBP14.41□□□□□ -0.1
NUP50-202ENST00000396096 ABCA11PQ4W5N1 156 aa14.41□□□□□ -0.1
NUP50-202ENST00000396096 UNQ6126/PRO20091Q6UXV3 157 aa14.41□□□□□ -0.1
NUP50-202ENST00000396096 OR5P3Q8WZ94 311 aa14.41□□□□□ -0.1
NUP50-202ENST00000396096 EXTL1Q92935 676 aa14.41□□□□□ -0.1
NUP50-202ENST00000396096 TOMM40LQ969M1 308 aa14.41□□□□□ -0.1
NUP50-202ENST00000396096 MICU1Q9BPX6 476 aa14.41□□□□□ -0.1
NUP50-202ENST00000396096 RSRP1Q9BUV0 290 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms