RNA–Protein interactions for RNA: ENST00000395892.5

CLIC1-209, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLIC1, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-209ENST00000395892 BEST4Q8NFU0 473 aa11.39□□□□□ -0.59
CLIC1-209ENST00000395892 GIMAP1Q8WWP7 306 aa11.39□□□□□ -0.59
CLIC1-209ENST00000395892 SLC25A21Q9BQT8 299 aaPredicted RBP11.39□□□□□ -0.59
CLIC1-209ENST00000395892 GINS4Q9BRT9 223 aa11.39□□□□□ -0.59
CLIC1-209ENST00000395892 ST6GALNAC5Q9BVH7 336 aa11.39□□□□□ -0.59
CLIC1-209ENST00000395892 ALX4Q9H161 411 aaPredicted RBP11.39□□□□□ -0.59
CLIC1-209ENST00000395892 CXXC4Q9H2H0 198 aa11.39□□□□□ -0.59
CLIC1-209ENST00000395892 MYOZ1Q9NP98 299 aaPredicted RBP11.39□□□□□ -0.59
CLIC1-209ENST00000395892 ETAA1Q9NY74 926 aa11.39□□□□□ -0.59
CLIC1-209ENST00000395892 CADP27708 2225 aa11.38□□□□□ -0.59
CLIC1-209ENST00000395892 A8MV72 311 aaPredicted RBP11.38□□□□□ -0.59
CLIC1-209ENST00000395892 ATP6V1G2-DDX39BF2Z307 99 aa11.38□□□□□ -0.59
CLIC1-209ENST00000395892 PRAF2O60831 178 aa11.38□□□□□ -0.59
CLIC1-209ENST00000395892 PTBP3O95758 552 aaKnown RBP11.38□□□□□ -0.59
CLIC1-209ENST00000395892 PGA5P0DJD9 388 aa11.38□□□□□ -0.59
CLIC1-209ENST00000395892 DTYMKP23919 212 aa11.38□□□□□ -0.59
CLIC1-209ENST00000395892 SNU13P55769 128 aaKnown RBP11.38□□□□□ -0.59
CLIC1-209ENST00000395892 ADORA2A-AS1P86434 159 aa11.38□□□□□ -0.59
CLIC1-209ENST00000395892 FCN2Q15485 313 aa11.38□□□□□ -0.59
CLIC1-209ENST00000395892 NKPD1Q17RQ9 610 aa11.38□□□□□ -0.59
CLIC1-209ENST00000395892 MPV17LQ2QL34 196 aa11.38□□□□□ -0.59
CLIC1-209ENST00000395892 FBXL19-AS1Q494R0 122 aa11.38□□□□□ -0.59
CLIC1-209ENST00000395892 ATAD3CQ5T2N8 411 aa11.38□□□□□ -0.59
CLIC1-209ENST00000395892 CD276Q5ZPR3 534 aa11.38□□□□□ -0.59
CLIC1-209ENST00000395892 OR13G1Q8NGZ3 307 aa11.38□□□□□ -0.59
CLIC1-209ENST00000395892 MAFIPQ8WZ33 124 aa11.38□□□□□ -0.59
CLIC1-209ENST00000395892 DYRK2Q92630 601 aa11.38□□□□□ -0.59
CLIC1-209ENST00000395892 GTF3AQ92664 365 aaKnown RBP11.38□□□□□ -0.59
CLIC1-209ENST00000395892 WFIKKN1Q96NZ8 548 aa11.38□□□□□ -0.59
CLIC1-209ENST00000395892 NRIP2Q9BQI9 281 aa11.38□□□□□ -0.59
CLIC1-209ENST00000395892 IFT22Q9H7X7 185 aa11.38□□□□□ -0.59
CLIC1-209ENST00000395892 FN3KRPQ9HA64 309 aa11.38□□□□□ -0.59
CLIC1-209ENST00000395892 HES4Q9HCC6 221 aa11.38□□□□□ -0.59
CLIC1-209ENST00000395892 MSL2Q9HCI7 577 aa11.38□□□□□ -0.59
CLIC1-209ENST00000395892 OSGIN2Q9Y236 505 aa11.38□□□□□ -0.59
CLIC1-209ENST00000395892 VSIG4Q9Y279 399 aa11.38□□□□□ -0.59
CLIC1-209ENST00000395892 SPEF1Q9Y4P9 236 aa11.38□□□□□ -0.59
CLIC1-209ENST00000395892 UBE2QL1A1L167 161 aa11.37□□□□□ -0.59
CLIC1-209ENST00000395892 OR2AT4A6NND4 320 aa11.37□□□□□ -0.59
CLIC1-209ENST00000395892 CEACAM18A8MTB9 384 aa11.37□□□□□ -0.59
CLIC1-209ENST00000395892 F5H5P2 479 aa11.37□□□□□ -0.59
CLIC1-209ENST00000395892 CCL21O00585 134 aa11.37□□□□□ -0.59
CLIC1-209ENST00000395892 CDIPTO14735 213 aa11.37□□□□□ -0.59
CLIC1-209ENST00000395892 TPD52L2O43399 206 aaKnown RBP11.37□□□□□ -0.59
CLIC1-209ENST00000395892 TIMM8AO60220 97 aaPredicted RBP11.37□□□□□ -0.59
CLIC1-209ENST00000395892 CSN2P05814 226 aa11.37□□□□□ -0.59
CLIC1-209ENST00000395892 GRPP07492 148 aa11.37□□□□□ -0.59
CLIC1-209ENST00000395892 FCGR3AP08637 254 aa11.37□□□□□ -0.59
CLIC1-209ENST00000395892 SULT1A3P0DMM9 295 aa11.37□□□□□ -0.59
CLIC1-209ENST00000395892 SULT1A4P0DMN0 295 aa11.37□□□□□ -0.59
CLIC1-209ENST00000395892 DUSP1P28562 367 aa11.37□□□□□ -0.59
CLIC1-209ENST00000395892 CASP6P55212 293 aa11.37□□□□□ -0.59
CLIC1-209ENST00000395892 IL13RA2Q14627 380 aa11.37□□□□□ -0.59
CLIC1-209ENST00000395892 ZMYND11Q15326 602 aa11.37□□□□□ -0.59
CLIC1-209ENST00000395892 ACTBL2Q562R1 376 aa11.37□□□□□ -0.59
CLIC1-209ENST00000395892 ATPAF1Q5TC12 328 aaPredicted RBP11.37□□□□□ -0.59
CLIC1-209ENST00000395892 SSX8Q7RTT4 187 aa11.37□□□□□ -0.59
CLIC1-209ENST00000395892 OVCH2Q7RTZ1 564 aa11.37□□□□□ -0.59
CLIC1-209ENST00000395892 LINC00596Q86U02 117 aa11.37□□□□□ -0.59
CLIC1-209ENST00000395892 LHFPL1Q86WI0 220 aa11.37□□□□□ -0.59
CLIC1-209ENST00000395892 SPERTQ8NA61 448 aa11.37□□□□□ -0.59
CLIC1-209ENST00000395892 NUP37Q8NFH4 326 aa11.37□□□□□ -0.59
CLIC1-209ENST00000395892 OR11H7Q8NGC8 314 aa11.37□□□□□ -0.59
CLIC1-209ENST00000395892 OR5AP2Q8NGF4 316 aa11.37□□□□□ -0.59
CLIC1-209ENST00000395892 PRRT1Q99946 306 aa11.37□□□□□ -0.59
CLIC1-209ENST00000395892 CMSS1Q9BQ75 279 aaKnown RBP11.37□□□□□ -0.59
CLIC1-209ENST00000395892 SEC22CQ9BRL7 303 aa11.37□□□□□ -0.59
CLIC1-209ENST00000395892 PLK3Q9H4B4 646 aa11.37□□□□□ -0.59
CLIC1-209ENST00000395892 RANGRFQ9HD47 186 aaPredicted RBP11.37□□□□□ -0.59
CLIC1-209ENST00000395892 SCP2D1Q9UJQ7 156 aa11.37□□□□□ -0.59
CLIC1-209ENST00000395892 EDARQ9UNE0 448 aa11.37□□□□□ -0.59
CLIC1-209ENST00000395892 PLEKHA6Q9Y2H5 1048 aa11.37□□□□□ -0.59
CLIC1-209ENST00000395892 PCNX1Q96RV3 2341 aa11.37□□□□□ -0.59
CLIC1-209ENST00000395892 RP1L1Q8IWN7 2480 aaPredicted RBP11.36□□□□□ -0.59
CLIC1-209ENST00000395892 TRAV24A0A0B4J272 114 aa11.36□□□□□ -0.59
CLIC1-209ENST00000395892 SNRPGP15A8MWD9 76 aa11.36□□□□□ -0.59
CLIC1-209ENST00000395892 ERVH48-1M5A8F1 160 aa11.36□□□□□ -0.59
CLIC1-209ENST00000395892 ATXN7O15265 892 aaPredicted RBP11.36□□□□□ -0.59
CLIC1-209ENST00000395892 OR7C1O76099 320 aaPredicted RBP11.36□□□□□ -0.59
CLIC1-209ENST00000395892 GLAP06280 429 aa11.36□□□□□ -0.59
CLIC1-209ENST00000395892 PPP3CBP16298 524 aa11.36□□□□□ -0.59
CLIC1-209ENST00000395892 PRKACAP17612 351 aa11.36□□□□□ -0.59
CLIC1-209ENST00000395892 AMY2BP19961 511 aa11.36□□□□□ -0.59
CLIC1-209ENST00000395892 PTAFRP25105 342 aa11.36□□□□□ -0.59
CLIC1-209ENST00000395892 CD200P41217 278 aa11.36□□□□□ -0.59
CLIC1-209ENST00000395892 MPPED2Q15777 294 aa11.36□□□□□ -0.59
CLIC1-209ENST00000395892 SRSF7Q16629 238 aaKnown RBP eCLIP11.36□□□□□ -0.593e-6■□□□□ 9.8
CLIC1-209ENST00000395892 SPRNQ5BIV9 151 aa11.36□□□□□ -0.59
CLIC1-209ENST00000395892 METTL11BQ5VVY1 283 aa11.36□□□□□ -0.59
CLIC1-209ENST00000395892 ZNF626Q68DY1 528 aa11.36□□□□□ -0.59
CLIC1-209ENST00000395892 ZNF660Q6AZW8 331 aaPredicted RBP11.36□□□□□ -0.59
CLIC1-209ENST00000395892 WFDC8Q8IUA0 241 aa11.36□□□□□ -0.59
CLIC1-209ENST00000395892 TCTE3Q8IZS6 198 aa11.36□□□□□ -0.59
CLIC1-209ENST00000395892 ZDHHC22Q8N966 263 aa11.36□□□□□ -0.59
CLIC1-209ENST00000395892 POC1AQ8NBT0 407 aa11.36□□□□□ -0.59
CLIC1-209ENST00000395892 TERB2Q8NHR7 220 aa11.36□□□□□ -0.59
CLIC1-209ENST00000395892 FYTTD1Q96QD9 318 aaKnown RBP11.36□□□□□ -0.59
CLIC1-209ENST00000395892 MRPL37Q9BZE1 423 aaKnown RBP11.36□□□□□ -0.59
CLIC1-209ENST00000395892 MED28Q9H204 178 aa11.36□□□□□ -0.59
CLIC1-209ENST00000395892 CHD8Q9HCK8 2581 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms