RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 NOX4Q9NPH5 578 aa7.82□□□□□ -1.16
MSH5-205ENST00000395853 SS18L2Q9UHA2 77 aa7.82□□□□□ -1.16
MSH5-205ENST00000395853 CHD8Q9HCK8 2581 aa7.82□□□□□ -1.16
MSH5-205ENST00000395853 DOCK9Q9BZ29 2069 aa7.81□□□□□ -1.16
MSH5-205ENST00000395853 NKX2-6A6NCS4 301 aa7.81□□□□□ -1.16
MSH5-205ENST00000395853 K7EQM0 130 aa7.81□□□□□ -1.16
MSH5-205ENST00000395853 SIVA1O15304 175 aa7.81□□□□□ -1.16
MSH5-205ENST00000395853 PDE6DO43924 150 aa7.81□□□□□ -1.16
MSH5-205ENST00000395853 PRH1P02810 166 aa7.81□□□□□ -1.16
MSH5-205ENST00000395853 CSN2P05814 226 aa7.81□□□□□ -1.16
MSH5-205ENST00000395853 IGLC2P0DOY2 106 aa7.81□□□□□ -1.16
MSH5-205ENST00000395853 IGLC3P0DOY3 106 aa7.81□□□□□ -1.16
MSH5-205ENST00000395853 GDF1P27539 372 aa7.81□□□□□ -1.16
MSH5-205ENST00000395853 PFN3P60673 137 aa7.81□□□□□ -1.16
MSH5-205ENST00000395853 SRPXP78539 464 aa7.81□□□□□ -1.16
MSH5-205ENST00000395853 NR0B2Q15466 257 aa7.81□□□□□ -1.16
MSH5-205ENST00000395853 GAB4Q2WGN9 574 aa7.81□□□□□ -1.16
MSH5-205ENST00000395853 ITPRIPL2Q3MIP1 535 aa7.81□□□□□ -1.16
MSH5-205ENST00000395853 ZNF880Q6PDB4 577 aa7.81□□□□□ -1.16
MSH5-205ENST00000395853 MBOAT2Q6ZWT7 520 aa7.81□□□□□ -1.16
MSH5-205ENST00000395853 MRGPRGQ86SM5 289 aa7.81□□□□□ -1.16
MSH5-205ENST00000395853 TGIF2LYQ8IUE0 185 aa7.81□□□□□ -1.16
MSH5-205ENST00000395853 SIRT6Q8N6T7 355 aa7.81□□□□□ -1.16
MSH5-205ENST00000395853 C5orf17Q8NAS9 161 aa7.81□□□□□ -1.16
MSH5-205ENST00000395853 PLPP7Q8NBV4 271 aa7.81□□□□□ -1.16
MSH5-205ENST00000395853 TMEM37Q8WXS4 190 aa7.81□□□□□ -1.16
MSH5-205ENST00000395853 NAT8Q9UHE5 227 aa7.81□□□□□ -1.16
MSH5-205ENST00000395853 OR51B2Q9Y5P1 312 aa7.81□□□□□ -1.16
MSH5-205ENST00000395853 CNOT1A5YKK6 2376 aaKnown RBP7.81□□□□□ -1.16
MSH5-205ENST00000395853 ATG2BQ96BY7 2078 aa7.81□□□□□ -1.16
MSH5-205ENST00000395853 BAHCC1Q9P281 2608 aa7.81□□□□□ -1.16
MSH5-205ENST00000395853 K7ESM1 405 aa7.81□□□□□ -1.16
MSH5-205ENST00000395853 RAB29O14966 203 aa7.81□□□□□ -1.16
MSH5-205ENST00000395853 ZNF205O95201 554 aa7.81□□□□□ -1.16
MSH5-205ENST00000395853 FAM3BP58499 235 aaPredicted RBP7.81□□□□□ -1.16
MSH5-205ENST00000395853 SMIM11AP58511 58 aa7.81□□□□□ -1.16
MSH5-205ENST00000395853 UBE2NP61088 152 aaKnown RBP7.81□□□□□ -1.16
MSH5-205ENST00000395853 TBPL1P62380 186 aa7.81□□□□□ -1.16
MSH5-205ENST00000395853 SUMO1P63165 101 aaKnown RBP7.81□□□□□ -1.16
MSH5-205ENST00000395853 LRRC10Q5BKY1 277 aa7.81□□□□□ -1.16
MSH5-205ENST00000395853 TMEM196Q5HYL7 178 aa7.81□□□□□ -1.16
MSH5-205ENST00000395853 AMMECR1LQ6DCA0 310 aa7.81□□□□□ -1.16
MSH5-205ENST00000395853 DPPA3Q6W0C5 159 aa7.81□□□□□ -1.16
MSH5-205ENST00000395853 LRRC70Q7Z2Q7 622 aa7.81□□□□□ -1.16
MSH5-205ENST00000395853 MRGPREQ86SM8 312 aa7.81□□□□□ -1.16
MSH5-205ENST00000395853 ZNF440Q8IYI8 595 aa7.81□□□□□ -1.16
MSH5-205ENST00000395853 CLEC1AQ8NC01 280 aa7.81□□□□□ -1.16
MSH5-205ENST00000395853 CHST4Q8NCG5 386 aa7.81□□□□□ -1.16
MSH5-205ENST00000395853 OR10G3Q8NGC4 313 aa7.81□□□□□ -1.16
MSH5-205ENST00000395853 OR52R1Q8NGF1 315 aa7.81□□□□□ -1.16
MSH5-205ENST00000395853 DVL3Q92997 716 aaPredicted RBP7.81□□□□□ -1.16
MSH5-205ENST00000395853 GLYATL1Q969I3 302 aa7.81□□□□□ -1.16
MSH5-205ENST00000395853 SLAMF6Q96DU3 332 aa7.81□□□□□ -1.16
MSH5-205ENST00000395853 ZNF764Q96H86 408 aaPredicted RBP7.81□□□□□ -1.16
MSH5-205ENST00000395853 SLC13A4Q9UKG4 626 aa7.81□□□□□ -1.16
MSH5-205ENST00000395853 WDR87Q6ZQQ6 2873 aa7.81□□□□□ -1.16
MSH5-205ENST00000395853 TRAV34A0A0B4J273 112 aa7.8□□□□□ -1.16
MSH5-205ENST00000395853 C1QTNF9BB2RNN3 333 aa7.8□□□□□ -1.16
MSH5-205ENST00000395853 IL2RAP01589 272 aa7.8□□□□□ -1.16
MSH5-205ENST00000395853 C1QTNF9P0C862 333 aa7.8□□□□□ -1.16
MSH5-205ENST00000395853 PET100P0DJ07 73 aa7.8□□□□□ -1.16
MSH5-205ENST00000395853 COX7A2P14406 83 aa7.8□□□□□ -1.16
MSH5-205ENST00000395853 CTRLP40313 264 aa7.8□□□□□ -1.16
MSH5-205ENST00000395853 GPR6P46095 362 aaPredicted RBP7.8□□□□□ -1.16
MSH5-205ENST00000395853 PPP1R1AQ13522 171 aa7.8□□□□□ -1.16
MSH5-205ENST00000395853 EXOSC7Q15024 291 aaKnown RBP7.8□□□□□ -1.16
MSH5-205ENST00000395853 DECR1Q16698 335 aa7.8□□□□□ -1.16
MSH5-205ENST00000395853 SPATA45Q537H7 98 aa7.8□□□□□ -1.16
MSH5-205ENST00000395853 GPR157Q5UAW9 335 aa7.8□□□□□ -1.16
MSH5-205ENST00000395853 CST9LP1Q5W188 147 aa7.8□□□□□ -1.16
MSH5-205ENST00000395853 ERASQ7Z444 233 aa7.8□□□□□ -1.16
MSH5-205ENST00000395853 CALHM1Q8IU99 346 aa7.8□□□□□ -1.16
MSH5-205ENST00000395853 C20orf196Q8IYI0 205 aa7.8□□□□□ -1.16
MSH5-205ENST00000395853 OR13C9Q8NGT0 318 aa7.8□□□□□ -1.16
MSH5-205ENST00000395853 EAF1Q96JC9 268 aaPredicted RBP7.8□□□□□ -1.16
MSH5-205ENST00000395853 TIMP4Q99727 224 aa7.8□□□□□ -1.16
MSH5-205ENST00000395853 ARHGDIGQ99819 225 aa7.8□□□□□ -1.16
MSH5-205ENST00000395853 PLA2G12AQ9BZM1 189 aa7.8□□□□□ -1.16
MSH5-205ENST00000395853 NMNAT2Q9BZQ4 307 aa7.8□□□□□ -1.16
MSH5-205ENST00000395853 YAE1D1Q9NRH1 226 aa7.8□□□□□ -1.16
MSH5-205ENST00000395853 STRAPQ9Y3F4 350 aaKnown RBP7.8□□□□□ -1.16
MSH5-205ENST00000395853 KIAA1549LQ6ZVL6 1849 aa7.8□□□□□ -1.16
MSH5-205ENST00000395853 DAPL1A0PJW8 107 aa7.8□□□□□ -1.16
MSH5-205ENST00000395853 C1orf226A1L170 272 aa7.8□□□□□ -1.16
MSH5-205ENST00000395853 RBFOX3A6NFN3 312 aa7.8□□□□□ -1.16
MSH5-205ENST00000395853 SERINC4A6NH21 518 aa7.8□□□□□ -1.16
MSH5-205ENST00000395853 J3QRE1 110 aa7.8□□□□□ -1.16
MSH5-205ENST00000395853 P2RX6O15547 441 aa7.8□□□□□ -1.16
MSH5-205ENST00000395853 TIAF1O95411 115 aa7.8□□□□□ -1.16
MSH5-205ENST00000395853 SERPINA7P05543 415 aa7.8□□□□□ -1.16
MSH5-205ENST00000395853 CHRM2P08172 466 aa7.8□□□□□ -1.16
MSH5-205ENST00000395853 CALCBP10092 127 aa7.8□□□□□ -1.16
MSH5-205ENST00000395853 CD33P20138 364 aa7.8□□□□□ -1.16
MSH5-205ENST00000395853 CD22P20273 847 aa7.8□□□□□ -1.16
MSH5-205ENST00000395853 GSTM3P21266 225 aa7.8□□□□□ -1.16
MSH5-205ENST00000395853 KITLGP21583 273 aa7.8□□□□□ -1.16
MSH5-205ENST00000395853 DUSP1P28562 367 aa7.8□□□□□ -1.16
MSH5-205ENST00000395853 CNN1P51911 297 aaKnown RBP7.8□□□□□ -1.16
MSH5-205ENST00000395853 PAFAH1B2P68402 229 aa7.8□□□□□ -1.16
MSH5-205ENST00000395853 PNRC1Q12796 327 aaPredicted RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms