RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 METRNQ9UJH8 293 aa13.73□□□□□ -0.21
CXCL1-201ENST00000395761 MAB21L2Q9Y586 359 aa13.73□□□□□ -0.21
CXCL1-201ENST00000395761 TRAV8-7A0A075B6U6 113 aa13.72□□□□□ -0.21
CXCL1-201ENST00000395761 IGHV2-70DA0A0C4DH43 119 aa13.72□□□□□ -0.21
CXCL1-201ENST00000395761 KIR2DS1A0A191URI9 304 aa13.72□□□□□ -0.21
CXCL1-201ENST00000395761 SMIM31A0A1B0GVY4 71 aa13.72□□□□□ -0.21
CXCL1-201ENST00000395761 MEGF11A6BM72 1044 aa13.72□□□□□ -0.21
CXCL1-201ENST00000395761 DPPA5A6NC42 116 aa13.72□□□□□ -0.21
CXCL1-201ENST00000395761 NKX6-3A6NJ46 265 aa13.72□□□□□ -0.21
CXCL1-201ENST00000395761 SIGLEC5O15389 551 aa13.72□□□□□ -0.21
CXCL1-201ENST00000395761 ALDOBP05062 364 aa13.72□□□□□ -0.21
CXCL1-201ENST00000395761 CALCBP10092 127 aa13.72□□□□□ -0.21
CXCL1-201ENST00000395761 CD37P11049 281 aa13.72□□□□□ -0.21
CXCL1-201ENST00000395761 ADRA2CP18825 462 aa13.72□□□□□ -0.21
CXCL1-201ENST00000395761 GATA3P23771 443 aa13.72□□□□□ -0.21
CXCL1-201ENST00000395761 PRDX2P32119 198 aa13.72□□□□□ -0.21
CXCL1-201ENST00000395761 ZP1P60852 638 aa13.72□□□□□ -0.21
CXCL1-201ENST00000395761 MKXQ8IYA7 352 aa13.72□□□□□ -0.21
CXCL1-201ENST00000395761 ZNRF1Q8ND25 227 aa13.72□□□□□ -0.21
CXCL1-201ENST00000395761 RAB2BQ8WUD1 216 aa13.72□□□□□ -0.21
CXCL1-201ENST00000395761 POM121Q96HA1 1249 aa13.72□□□□□ -0.21
CXCL1-201ENST00000395761 KCTD7Q96MP8 289 aa13.72□□□□□ -0.21
CXCL1-201ENST00000395761 NUDT16L1Q9BRJ7 211 aaKnown RBP13.72□□□□□ -0.21
CXCL1-201ENST00000395761 CENPOQ9BU64 300 aa13.72□□□□□ -0.21
CXCL1-201ENST00000395761 RBM38Q9H0Z9 239 aaKnown RBP13.72□□□□□ -0.21
CXCL1-201ENST00000395761 NEK6Q9HC98 313 aa13.72□□□□□ -0.21
CXCL1-201ENST00000395761 TCF7L1Q9HCS4 588 aa13.72□□□□□ -0.21
CXCL1-201ENST00000395761 BATF3Q9NR55 127 aa13.72□□□□□ -0.21
CXCL1-201ENST00000395761 RBFOX1Q9NWB1 397 aaKnown RBP13.72□□□□□ -0.21
CXCL1-201ENST00000395761 IL36RNQ9UBH0 155 aa13.72□□□□□ -0.21
CXCL1-201ENST00000395761 CKLFQ9UBR5 152 aa13.72□□□□□ -0.21
CXCL1-201ENST00000395761 LPAR3Q9UBY5 353 aa13.72□□□□□ -0.21
CXCL1-201ENST00000395761 OR14J1Q9UGF5 321 aa13.72□□□□□ -0.21
CXCL1-201ENST00000395761 LOC100506127A0A0U1RQW1 187 aa13.71□□□□□ -0.21
CXCL1-201ENST00000395761 J3QLI3 93 aa13.71□□□□□ -0.21
CXCL1-201ENST00000395761 ZNF701M0R085 212 aaPredicted RBP13.71□□□□□ -0.21
CXCL1-201ENST00000395761 NDUFB3O43676 98 aa13.71□□□□□ -0.21
CXCL1-201ENST00000395761 HNF1AP20823 631 aa13.71□□□□□ -0.21
CXCL1-201ENST00000395761 CALRP27797 417 aaKnown RBP13.71□□□□□ -0.21
CXCL1-201ENST00000395761 RIPPLY3P57055 190 aa13.71□□□□□ -0.21
CXCL1-201ENST00000395761 IL13RA1P78552 427 aa13.71□□□□□ -0.21
CXCL1-201ENST00000395761 PAX8Q06710 450 aa13.71□□□□□ -0.21
CXCL1-201ENST00000395761 BTN2A1Q7KYR7 527 aa13.71□□□□□ -0.21
CXCL1-201ENST00000395761 C1QL2Q7Z5L3 287 aa13.71□□□□□ -0.21
CXCL1-201ENST00000395761 LRRTM1Q86UE6 522 aa13.71□□□□□ -0.21
CXCL1-201ENST00000395761 CDH26Q8IXH8 852 aa13.71□□□□□ -0.21
CXCL1-201ENST00000395761 SDSLQ96GA7 329 aa13.71□□□□□ -0.21
CXCL1-201ENST00000395761 MED30Q96HR3 178 aa13.71□□□□□ -0.21
CXCL1-201ENST00000395761 TMEM138Q9NPI0 162 aa13.71□□□□□ -0.21
CXCL1-201ENST00000395761 WNK2Q9Y3S1 2297 aa13.71□□□□□ -0.21
CXCL1-201ENST00000395761 C2CD3Q4AC94 2353 aa13.7□□□□□ -0.22
CXCL1-201ENST00000395761 NAV3Q8IVL0 2385 aa13.7□□□□□ -0.22
CXCL1-201ENST00000395761 A6NHS1 94 aa13.7□□□□□ -0.22
CXCL1-201ENST00000395761 MAGEB3O15480 346 aa13.7□□□□□ -0.22
CXCL1-201ENST00000395761 KDM4BO94953 1096 aa13.7□□□□□ -0.22
CXCL1-201ENST00000395761 CYB5AP00167 134 aa13.7□□□□□ -0.22
CXCL1-201ENST00000395761 SFTPBP07988 381 aa13.7□□□□□ -0.22
CXCL1-201ENST00000395761 TMEM225BP0DP42 221 aa13.7□□□□□ -0.22
CXCL1-201ENST00000395761 MTNR1BP49286 362 aa13.7□□□□□ -0.22
CXCL1-201ENST00000395761 PPP3R1P63098 170 aa13.7□□□□□ -0.22
CXCL1-201ENST00000395761 LRRC10Q5BKY1 277 aa13.7□□□□□ -0.22
CXCL1-201ENST00000395761 CD276Q5ZPR3 534 aa13.7□□□□□ -0.22
CXCL1-201ENST00000395761 TPRA1Q86W33 373 aa13.7□□□□□ -0.22
CXCL1-201ENST00000395761 FAM58AQ8N1B3 248 aa13.7□□□□□ -0.22
CXCL1-201ENST00000395761 EMG1Q92979 244 aaKnown RBP13.7□□□□□ -0.22
CXCL1-201ENST00000395761 SLITRK2Q9H156 845 aa13.7□□□□□ -0.22
CXCL1-201ENST00000395761 SLC25A10Q9UBX3 287 aaPredicted RBP13.7□□□□□ -0.22
CXCL1-201ENST00000395761 AUP1Q9Y679 476 aa13.7□□□□□ -0.22
CXCL1-201ENST00000395761 SHISA3A0PJX4 238 aa13.69□□□□□ -0.22
CXCL1-201ENST00000395761 ENSAO43768 121 aaKnown RBP13.69□□□□□ -0.22
CXCL1-201ENST00000395761 KNG1P01042 644 aa13.69□□□□□ -0.22
CXCL1-201ENST00000395761 FAM157CP0CG43 387 aa13.69□□□□□ -0.22
CXCL1-201ENST00000395761 NDUFB7P17568 137 aa13.69□□□□□ -0.22
CXCL1-201ENST00000395761 SRD5A1P18405 259 aa13.69□□□□□ -0.22
CXCL1-201ENST00000395761 MYL9P24844 172 aa13.69□□□□□ -0.22
CXCL1-201ENST00000395761 DUSP1P28562 367 aa13.69□□□□□ -0.22
CXCL1-201ENST00000395761 BDKRB2P30411 391 aa13.69□□□□□ -0.22
CXCL1-201ENST00000395761 SRP14P37108 136 aaKnown RBP13.69□□□□□ -0.22
CXCL1-201ENST00000395761 PSMD7P51665 324 aa13.69□□□□□ -0.22
CXCL1-201ENST00000395761 SNU13P55769 128 aaKnown RBP13.69□□□□□ -0.22
CXCL1-201ENST00000395761 DDI2Q5TDH0 399 aa13.69□□□□□ -0.22
CXCL1-201ENST00000395761 BTNL3Q6UXE8 466 aa13.69□□□□□ -0.22
CXCL1-201ENST00000395761 LYPD6Q86Y78 171 aa13.69□□□□□ -0.22
CXCL1-201ENST00000395761 Q8IYB0 196 aa13.69□□□□□ -0.22
CXCL1-201ENST00000395761 SAXO1Q8IYX7 474 aa13.69□□□□□ -0.22
CXCL1-201ENST00000395761 ZSCAN4Q8NAM6 433 aaPredicted RBP13.69□□□□□ -0.22
CXCL1-201ENST00000395761 TMEM185AQ8NFB2 350 aa13.69□□□□□ -0.22
CXCL1-201ENST00000395761 TNFAIP8L1Q8WVP5 186 aa13.69□□□□□ -0.22
CXCL1-201ENST00000395761 DGCR14Q96DF8 476 aaKnown RBP13.69□□□□□ -0.22
CXCL1-201ENST00000395761 GPER1Q99527 375 aa13.69□□□□□ -0.22
CXCL1-201ENST00000395761 RNF167Q9H6Y7 350 aa13.69□□□□□ -0.22
CXCL1-201ENST00000395761 ELL3Q9HB65 397 aaPredicted RBP13.69□□□□□ -0.22
CXCL1-201ENST00000395761 RPUSD1Q9UJJ7 312 aaKnown RBP13.69□□□□□ -0.22
CXCL1-201ENST00000395761 DOCK11Q5JSL3 2073 aa13.68□□□□□ -0.22
CXCL1-201ENST00000395761 PDCD5O14737 125 aa13.68□□□□□ -0.22
CXCL1-201ENST00000395761 SLC22A1O15245 554 aa13.68□□□□□ -0.22
CXCL1-201ENST00000395761 ECDO95905 644 aaPredicted RBP13.68□□□□□ -0.22
CXCL1-201ENST00000395761 MAS1P04201 325 aa13.68□□□□□ -0.22
CXCL1-201ENST00000395761 PRKACAP17612 351 aa13.68□□□□□ -0.22
CXCL1-201ENST00000395761 ZNF93P35789 620 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms