RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.16□□□□□ -1.26
ATG4A-205ENST00000394892 SLC7A11Q9UPY5 501 aa7.16□□□□□ -1.26
ATG4A-205ENST00000394892 SIRT4Q9Y6E7 314 aaPredicted RBP7.16□□□□□ -1.26
ATG4A-205ENST00000394892 TRBV2A0A0J9YWF9 115 aa7.15□□□□□ -1.26
ATG4A-205ENST00000394892 LOC100130705A0A1B0GUX0 176 aa7.15□□□□□ -1.26
ATG4A-205ENST00000394892 GATBO75879 557 aaKnown RBP7.15□□□□□ -1.26
ATG4A-205ENST00000394892 ZFPL1O95159 310 aa7.15□□□□□ -1.26
ATG4A-205ENST00000394892 TSPAN15O95858 294 aa7.15□□□□□ -1.26
ATG4A-205ENST00000394892 HAND1O96004 215 aa7.15□□□□□ -1.26
ATG4A-205ENST00000394892 MT-ND2P03891 347 aa7.15□□□□□ -1.26
ATG4A-205ENST00000394892 CHRM2P08172 466 aa7.15□□□□□ -1.26
ATG4A-205ENST00000394892 LIMS3P0CW19 117 aa7.15□□□□□ -1.26
ATG4A-205ENST00000394892 LIMS4P0CW20 117 aa7.15□□□□□ -1.26
ATG4A-205ENST00000394892 ZNF728P0DKX0 622 aa7.15□□□□□ -1.26
ATG4A-205ENST00000394892 POU3F4P49335 361 aa7.15□□□□□ -1.26
ATG4A-205ENST00000394892 GTF2A1P52655 376 aaPredicted RBP7.15□□□□□ -1.26
ATG4A-205ENST00000394892 EFNB2P52799 333 aa7.15□□□□□ -1.26
ATG4A-205ENST00000394892 SNU13P55769 128 aaKnown RBP7.15□□□□□ -1.26
ATG4A-205ENST00000394892 ZP1P60852 638 aa7.15□□□□□ -1.26
ATG4A-205ENST00000394892 ALKBH1Q13686 389 aaKnown RBP7.15□□□□□ -1.26
ATG4A-205ENST00000394892 GALEQ14376 348 aa7.15□□□□□ -1.26
ATG4A-205ENST00000394892 ZNF146Q15072 292 aa7.15□□□□□ -1.26
ATG4A-205ENST00000394892 C2orf68Q2NKX9 166 aa7.15□□□□□ -1.26
ATG4A-205ENST00000394892 TMEM244Q5VVB8 128 aa7.15□□□□□ -1.26
ATG4A-205ENST00000394892 MEDAGQ5VYS4 303 aa7.15□□□□□ -1.26
ATG4A-205ENST00000394892 ZNF626Q68DY1 528 aa7.15□□□□□ -1.26
ATG4A-205ENST00000394892 ZNF529Q6P280 563 aa7.15□□□□□ -1.26
ATG4A-205ENST00000394892 Q6P435 159 aa7.15□□□□□ -1.26
ATG4A-205ENST00000394892 CCDC121Q6ZUS5 278 aa7.15□□□□□ -1.26
ATG4A-205ENST00000394892 KCTD20Q7Z5Y7 419 aa7.15□□□□□ -1.26
ATG4A-205ENST00000394892 OR8H2Q8N162 312 aa7.15□□□□□ -1.26
ATG4A-205ENST00000394892 FAM58AQ8N1B3 248 aa7.15□□□□□ -1.26
ATG4A-205ENST00000394892 ASCC1Q8N9N2 400 aaKnown RBP7.15□□□□□ -1.26
ATG4A-205ENST00000394892 CCDC54Q8NEL0 328 aa7.15□□□□□ -1.26
ATG4A-205ENST00000394892 OR11H6Q8NGC7 330 aa7.15□□□□□ -1.26
ATG4A-205ENST00000394892 OR13C9Q8NGT0 318 aa7.15□□□□□ -1.26
ATG4A-205ENST00000394892 PP6455Q8WZ26 134 aa7.15□□□□□ -1.26
ATG4A-205ENST00000394892 C10orf35Q96D05 121 aa7.15□□□□□ -1.26
ATG4A-205ENST00000394892 BORCS8Q96FH0 119 aa7.15□□□□□ -1.26
ATG4A-205ENST00000394892 SNX22Q96L94 193 aa7.15□□□□□ -1.26
ATG4A-205ENST00000394892 PDCD1LG2Q9BQ51 273 aa7.15□□□□□ -1.26
ATG4A-205ENST00000394892 HEXA-AS1Q9H8Q6 139 aa7.15□□□□□ -1.26
ATG4A-205ENST00000394892 PLEKHA1Q9HB21 404 aa7.15□□□□□ -1.26
ATG4A-205ENST00000394892 HMG20AQ9NP66 347 aa7.15□□□□□ -1.26
ATG4A-205ENST00000394892 ERVK13-1Q9NX77 482 aa7.15□□□□□ -1.26
ATG4A-205ENST00000394892 ZNF581Q9P0T4 197 aa7.15□□□□□ -1.26
ATG4A-205ENST00000394892 FOXJ3Q9UPW0 622 aa7.15□□□□□ -1.26
ATG4A-205ENST00000394892 GMPPBQ9Y5P6 360 aa7.15□□□□□ -1.26
ATG4A-205ENST00000394892 A6NDX4 124 aa7.14□□□□□ -1.27
ATG4A-205ENST00000394892 VGLL3A8MV65 326 aa7.14□□□□□ -1.27
ATG4A-205ENST00000394892 KDM4BO94953 1096 aa7.14□□□□□ -1.27
ATG4A-205ENST00000394892 CLIC3O95833 236 aa7.14□□□□□ -1.27
ATG4A-205ENST00000394892 PAHP00439 452 aa7.14□□□□□ -1.27
ATG4A-205ENST00000394892 LALBAP00709 142 aa7.14□□□□□ -1.27
ATG4A-205ENST00000394892 HTR1AP08908 422 aa7.14□□□□□ -1.27
ATG4A-205ENST00000394892 IGHV1-8P0DP01 117 aa7.14□□□□□ -1.27
ATG4A-205ENST00000394892 PRKACAP17612 351 aa7.14□□□□□ -1.27
ATG4A-205ENST00000394892 TGFBR2P37173 567 aa7.14□□□□□ -1.27
ATG4A-205ENST00000394892 RBP2P50120 134 aa7.14□□□□□ -1.27
ATG4A-205ENST00000394892 ATP1B3P54709 279 aa7.14□□□□□ -1.27
ATG4A-205ENST00000394892 MTCP1P56278 107 aa7.14□□□□□ -1.27
ATG4A-205ENST00000394892 EDDM3BP56851 147 aa7.14□□□□□ -1.27
ATG4A-205ENST00000394892 ACTC1P68032 377 aa7.14□□□□□ -1.27
ATG4A-205ENST00000394892 ACTA1P68133 377 aa7.14□□□□□ -1.27
ATG4A-205ENST00000394892 IL18R1Q13478 541 aa7.14□□□□□ -1.27
ATG4A-205ENST00000394892 BLMHQ13867 455 aa7.14□□□□□ -1.27
ATG4A-205ENST00000394892 EDDM3AQ14507 147 aa7.14□□□□□ -1.27
ATG4A-205ENST00000394892 HABP2Q14520 560 aaPredicted RBP7.14□□□□□ -1.27
ATG4A-205ENST00000394892 CDK5R1Q15078 307 aa7.14□□□□□ -1.27
ATG4A-205ENST00000394892 AANATQ16613 207 aa7.14□□□□□ -1.27
ATG4A-205ENST00000394892 LRRC75BQ2VPJ9 315 aa7.14□□□□□ -1.27
ATG4A-205ENST00000394892 PLA1AQ53H76 456 aa7.14□□□□□ -1.27
ATG4A-205ENST00000394892 DHRS7BQ6IAN0 325 aaPredicted RBP7.14□□□□□ -1.27
ATG4A-205ENST00000394892 LAIR2Q6ISS4 152 aa7.14□□□□□ -1.27
ATG4A-205ENST00000394892 ZBTB49Q6ZSB9 765 aa7.14□□□□□ -1.27
ATG4A-205ENST00000394892 FAM220AQ7Z4H9 259 aa7.14□□□□□ -1.27
ATG4A-205ENST00000394892 SYS1Q8N2H4 156 aa7.14□□□□□ -1.27
ATG4A-205ENST00000394892 OR51A2Q8NGJ7 313 aa7.14□□□□□ -1.27
ATG4A-205ENST00000394892 OR5D18Q8NGL1 313 aa7.14□□□□□ -1.27
ATG4A-205ENST00000394892 OR5R1Q8NH85 324 aa7.14□□□□□ -1.27
ATG4A-205ENST00000394892 RPS4Y2Q8TD47 263 aa7.14□□□□□ -1.27
ATG4A-205ENST00000394892 WIPF2Q8TF74 440 aaPredicted RBP7.14□□□□□ -1.27
ATG4A-205ENST00000394892 EMG1Q92979 244 aaKnown RBP7.14□□□□□ -1.27
ATG4A-205ENST00000394892 ORAI1Q96D31 301 aa7.14□□□□□ -1.27
ATG4A-205ENST00000394892 COQ2Q96H96 371 aa7.14□□□□□ -1.27
ATG4A-205ENST00000394892 CYYR1Q96J86 154 aa7.14□□□□□ -1.27
ATG4A-205ENST00000394892 ADI1Q9BV57 179 aa7.14□□□□□ -1.27
ATG4A-205ENST00000394892 ALG8Q9BVK2 526 aa7.14□□□□□ -1.27
ATG4A-205ENST00000394892 ZNF702PQ9H963 129 aa7.14□□□□□ -1.27
ATG4A-205ENST00000394892 FBLN5Q9UBX5 448 aa7.14□□□□□ -1.27
ATG4A-205ENST00000394892 HHLA2Q9UM44 414 aa7.14□□□□□ -1.27
ATG4A-205ENST00000394892 CAB39Q9Y376 341 aaPredicted RBP7.14□□□□□ -1.27
ATG4A-205ENST00000394892 BTBD17A6NE02 478 aa7.13□□□□□ -1.27
ATG4A-205ENST00000394892 SIRPB1O00241 398 aa7.13□□□□□ -1.27
ATG4A-205ENST00000394892 OR2H2O95918 312 aa7.13□□□□□ -1.27
ATG4A-205ENST00000394892 CGB3P0DN86 165 aa7.13□□□□□ -1.27
ATG4A-205ENST00000394892 CGB7P0DN87 165 aa7.13□□□□□ -1.27
ATG4A-205ENST00000394892 PRKACBP22694 351 aa7.13□□□□□ -1.27
ATG4A-205ENST00000394892 KIR2DS4P43632 304 aa7.13□□□□□ -1.27
ATG4A-205ENST00000394892 GLIPR1P48060 266 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms