RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 BRICD5Q6PL45 260 aa15.92■□□□□ 0.14
PCDHA1-202ENST00000394633 COMMD1Q8N668 190 aa15.92■□□□□ 0.14
PCDHA1-202ENST00000394633 C18orf12Q96KH6 178 aa15.92■□□□□ 0.14
PCDHA1-202ENST00000394633 NAA11Q9BSU3 229 aaPredicted RBP15.92■□□□□ 0.14
PCDHA1-202ENST00000394633 ZFHX2Q9C0A1 2572 aaPredicted RBP15.92■□□□□ 0.14
PCDHA1-202ENST00000394633 BORCS7-ASMTA0A0B4J1R7 106 aa15.91■□□□□ 0.14
PCDHA1-202ENST00000394633 TERTO14746 1132 aaKnown RBP15.91■□□□□ 0.14
PCDHA1-202ENST00000394633 EIF1BO60739 113 aaKnown RBP15.91■□□□□ 0.14
PCDHA1-202ENST00000394633 GLI4P10075 376 aa15.91■□□□□ 0.14
PCDHA1-202ENST00000394633 ACP1P24666 158 aa15.91■□□□□ 0.14
PCDHA1-202ENST00000394633 P2RY1P47900 373 aa15.91■□□□□ 0.14
PCDHA1-202ENST00000394633 SUCLG1P53597 346 aaKnown RBP15.91■□□□□ 0.14
PCDHA1-202ENST00000394633 S100A12P80511 92 aa15.91■□□□□ 0.14
PCDHA1-202ENST00000394633 MRPL14Q6P1L8 145 aaKnown RBP15.91■□□□□ 0.14
PCDHA1-202ENST00000394633 LIAT1Q6ZQX7 453 aa15.91■□□□□ 0.14
PCDHA1-202ENST00000394633 LRTM2Q8N967 370 aa15.91■□□□□ 0.14
PCDHA1-202ENST00000394633 OR52M1Q8NGK5 317 aa15.91■□□□□ 0.14
PCDHA1-202ENST00000394633 HPSE2Q8WWQ2 592 aa15.91■□□□□ 0.14
PCDHA1-202ENST00000394633 REEP6Q96HR9 211 aa15.91■□□□□ 0.14
PCDHA1-202ENST00000394633 PROK2Q9HC23 129 aa15.91■□□□□ 0.14
PCDHA1-202ENST00000394633 PCNX2A6NKB5 2137 aa15.91■□□□□ 0.14
PCDHA1-202ENST00000394633 CCDC187A0A096LP49 1063 aa15.91■□□□□ 0.14
PCDHA1-202ENST00000394633 C7orf77A4D0Y5 90 aa15.91■□□□□ 0.14
PCDHA1-202ENST00000394633 FAM221AA4D161 298 aa15.91■□□□□ 0.14
PCDHA1-202ENST00000394633 C1orf196B1AJZ1 125 aa15.91■□□□□ 0.14
PCDHA1-202ENST00000394633 ZIC3O60481 467 aa15.91■□□□□ 0.14
PCDHA1-202ENST00000394633 VAMP5O95183 116 aa15.91■□□□□ 0.14
PCDHA1-202ENST00000394633 SNRNP70P08621 437 aaKnown RBP15.91■□□□□ 0.14
PCDHA1-202ENST00000394633 ZNF806P0C7X5 589 aa15.91■□□□□ 0.14
PCDHA1-202ENST00000394633 CCL3P10147 92 aa15.91■□□□□ 0.14
PCDHA1-202ENST00000394633 ZNF44P15621 663 aa15.91■□□□□ 0.14
PCDHA1-202ENST00000394633 ZFP36L1Q07352 338 aaKnown RBP15.91■□□□□ 0.14
PCDHA1-202ENST00000394633 FAM27BQ5VT28 67 aa15.91■□□□□ 0.14
PCDHA1-202ENST00000394633 OR5L1Q8NGL2 311 aa15.91■□□□□ 0.14
PCDHA1-202ENST00000394633 IP6K3Q96PC2 410 aa15.91■□□□□ 0.14
PCDHA1-202ENST00000394633 SUCNR1Q9BXA5 334 aa15.91■□□□□ 0.14
PCDHA1-202ENST00000394633 SH3BGRL3Q9H299 93 aa15.91■□□□□ 0.14
PCDHA1-202ENST00000394633 SPACA1Q9HBV2 294 aa15.91■□□□□ 0.14
PCDHA1-202ENST00000394633 SLC2A9Q9NRM0 540 aa15.91■□□□□ 0.14
PCDHA1-202ENST00000394633 KNTC1P50748 2209 aa15.91■□□□□ 0.14
PCDHA1-202ENST00000394633 PRSS44E7EML9 344 aa15.9■□□□□ 0.14
PCDHA1-202ENST00000394633 G3V3Y1 287 aa15.9■□□□□ 0.14
PCDHA1-202ENST00000394633 GEMIN2O14893 280 aaKnown RBP15.9■□□□□ 0.14
PCDHA1-202ENST00000394633 CCL4P13236 92 aa15.9■□□□□ 0.14
PCDHA1-202ENST00000394633 CAMLGP49069 296 aa15.9■□□□□ 0.14
PCDHA1-202ENST00000394633 MRPS34P82930 218 aaKnown RBP15.9■□□□□ 0.14
PCDHA1-202ENST00000394633 TCF15Q12870 199 aa15.9■□□□□ 0.14
PCDHA1-202ENST00000394633 PIGYQ3MUY2 71 aa15.9■□□□□ 0.14
PCDHA1-202ENST00000394633 GPR157Q5UAW9 335 aa15.9■□□□□ 0.14
PCDHA1-202ENST00000394633 SLC22A25Q6T423 547 aa15.9■□□□□ 0.14
PCDHA1-202ENST00000394633 OR10AD1Q8NGE0 317 aa15.9■□□□□ 0.14
PCDHA1-202ENST00000394633 MSI2Q96DH6 328 aaKnown RBP15.9■□□□□ 0.14
PCDHA1-202ENST00000394633 RGCCQ9H4X1 137 aa15.9■□□□□ 0.14
PCDHA1-202ENST00000394633 C19orf12Q9NSK7 152 aa15.9■□□□□ 0.14
PCDHA1-202ENST00000394633 LUZP4Q9P127 313 aa15.9■□□□□ 0.14
PCDHA1-202ENST00000394633 IGKV1-12A0A0C4DH73 117 aa15.9■□□□□ 0.14
PCDHA1-202ENST00000394633 A0A0J9YW62 118 aa15.9■□□□□ 0.14
PCDHA1-202ENST00000394633 C5orf52A6NGY3 159 aa15.9■□□□□ 0.14
PCDHA1-202ENST00000394633 SGCEO43556 437 aa15.9■□□□□ 0.14
PCDHA1-202ENST00000394633 SYNGR3O43761 229 aa15.9■□□□□ 0.14
PCDHA1-202ENST00000394633 C1QL1O75973 258 aa15.9■□□□□ 0.14
PCDHA1-202ENST00000394633 IGKV1D-12P01611 117 aa15.9■□□□□ 0.14
PCDHA1-202ENST00000394633 LIFP15018 202 aa15.9■□□□□ 0.14
PCDHA1-202ENST00000394633 RAB35Q15286 201 aa15.9■□□□□ 0.14
PCDHA1-202ENST00000394633 TGIF1Q15583 401 aa15.9■□□□□ 0.14
PCDHA1-202ENST00000394633 RNF212Q495C1 297 aa15.9■□□□□ 0.14
PCDHA1-202ENST00000394633 ASCL4Q6XD76 172 aa15.9■□□□□ 0.14
PCDHA1-202ENST00000394633 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.9■□□□□ 0.14
PCDHA1-202ENST00000394633 PPP1R3BQ86XI6 285 aa15.9■□□□□ 0.14
PCDHA1-202ENST00000394633 KDF1Q8NAX2 398 aaPredicted RBP15.9■□□□□ 0.14
PCDHA1-202ENST00000394633 OR11L1Q8NGX0 322 aa15.9■□□□□ 0.14
PCDHA1-202ENST00000394633 ANGPTL4Q9BY76 406 aa15.9■□□□□ 0.14
PCDHA1-202ENST00000394633 TNFSF11O14788 317 aa15.89■□□□□ 0.13
PCDHA1-202ENST00000394633 LMO1P25800 156 aa15.89■□□□□ 0.13
PCDHA1-202ENST00000394633 DUSP1P28562 367 aa15.89■□□□□ 0.13
PCDHA1-202ENST00000394633 NHLH2Q02577 135 aa15.89■□□□□ 0.13
PCDHA1-202ENST00000394633 CNN3Q15417 329 aaKnown RBP15.89■□□□□ 0.13
PCDHA1-202ENST00000394633 ZNF774Q6NX45 483 aa15.89■□□□□ 0.13
PCDHA1-202ENST00000394633 NAXEQ8NCW5 288 aa15.89■□□□□ 0.13
PCDHA1-202ENST00000394633 ISOC2Q96AB3 205 aa15.89■□□□□ 0.13
PCDHA1-202ENST00000394633 INTS12Q96CB8 462 aaKnown RBP15.89■□□□□ 0.13
PCDHA1-202ENST00000394633 C20orf24Q9BUV8 137 aa15.89■□□□□ 0.13
PCDHA1-202ENST00000394633 SRXN1Q9BYN0 137 aa15.89■□□□□ 0.13
PCDHA1-202ENST00000394633 EIF5A2Q9GZV4 153 aaKnown RBP15.89■□□□□ 0.13
PCDHA1-202ENST00000394633 MT-ND4LP03901 98 aa15.88■□□□□ 0.13
PCDHA1-202ENST00000394633 DAOP14920 347 aa15.88■□□□□ 0.13
PCDHA1-202ENST00000394633 RBP2P50120 134 aa15.88■□□□□ 0.13
PCDHA1-202ENST00000394633 DSCR4P56555 118 aaPredicted RBP15.88■□□□□ 0.13
PCDHA1-202ENST00000394633 IL13RA2Q14627 380 aa15.88■□□□□ 0.13
PCDHA1-202ENST00000394633 BORCS8Q96FH0 119 aa15.88■□□□□ 0.13
PCDHA1-202ENST00000394633 PARD6AQ9NPB6 346 aa15.88■□□□□ 0.13
PCDHA1-202ENST00000394633 FAM86C1Q9NVL1 165 aa15.88■□□□□ 0.13
PCDHA1-202ENST00000394633 RCL1Q9Y2P8 373 aaKnown RBP15.88■□□□□ 0.13
PCDHA1-202ENST00000394633 A0A1W2PPE3 182 aa15.88■□□□□ 0.13
PCDHA1-202ENST00000394633 A0A1W2PPH5 198 aa15.88■□□□□ 0.13
PCDHA1-202ENST00000394633 A6NLC8 198 aa15.88■□□□□ 0.13
PCDHA1-202ENST00000394633 LINC01387J3KSC0 135 aa15.88■□□□□ 0.13
PCDHA1-202ENST00000394633 UBE2CO00762 179 aa15.88■□□□□ 0.13
PCDHA1-202ENST00000394633 AGAP20933 346 aa15.88■□□□□ 0.13
PCDHA1-202ENST00000394633 EIF2S3LQ2VIR3 472 aaKnown RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms