RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 IGKV3-11P04433 115 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 PGA4P0DJD7 388 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 PGA5P0DJD9 388 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 GLI4P10075 376 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 OR10J1P30954 320 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 CRYBA2P53672 197 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 TMEM33P57088 247 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 KRTDAPP60985 99 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 HLA-DRB3P79483 266 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 CFHR1Q03591 330 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 EGR3Q06889 387 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 HERPUD1Q15011 391 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 FAM58AQ8N1B3 248 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 ZDHHC22Q8N966 263 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 OR10A7Q8NGE5 316 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 OR51T1Q8NGJ9 327 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 EDARADDQ8WWZ3 215 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 TBX15Q96SF7 602 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 DEFB127Q9H1M4 99 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 FOXJ2Q9P0K8 574 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 NSG2Q9Y328 171 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 EMC9Q9Y3B6 208 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 CACNA1IQ9P0X4 2223 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 RBFOX3A6NFN3 312 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 HSBP1L1C9JCN9 74 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 TNFSF11O14788 317 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 ST8SIA3O43173 380 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 CD74P04233 296 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 MST1P26927 711 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 APLNRP35414 380 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 SULT1A2P50226 295 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 DOC2BQ14184 412 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 SLC17A1Q14916 467 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 ACOT6Q3I5F7 207 aaPredicted RBP5.02□□□□□ -1.61
RFFL-202ENST00000394597 SLC22A6Q4U2R8 563 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 TSEN54Q7Z6J9 526 aaKnown RBP5.02□□□□□ -1.61
RFFL-202ENST00000394597 NR2C2APQ86WQ0 139 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 DMRTC2Q8IXT2 367 aaPredicted RBP5.02□□□□□ -1.61
RFFL-202ENST00000394597 OR2V1Q8NHB1 315 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 GPX8Q8TED1 209 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 DCBLD2Q96PD2 775 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 CIB3Q96Q77 187 aaPredicted RBP5.02□□□□□ -1.61
RFFL-202ENST00000394597 SMIM7Q9BQ49 75 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 NICN1Q9BSH3 213 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 SOX7Q9BT81 388 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 FAM103A1Q9BTL3 118 aaKnown RBP5.02□□□□□ -1.61
RFFL-202ENST00000394597 PARD6GQ9BYG4 376 aaPredicted RBP5.02□□□□□ -1.61
RFFL-202ENST00000394597 ZNF586Q9NXT0 402 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 SH3BGRL2Q9UJC5 107 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 SCN2AQ99250 2005 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 C2orf16Q68DN1 1984 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 THADAQ6YHU6 1953 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 IGKV3D-11A0A0A0MRZ8 115 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 TGFBR3LH3BV60 316 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 K7ERU9 68 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 SDCBPO00560 298 aaPredicted RBP5.02□□□□□ -1.61
RFFL-202ENST00000394597 PLPP3O14495 311 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 OPN1MWP04001 364 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 OPN1MW2P0DN77 364 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 OPN1MW3P0DN78 364 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 SRD5A2P31213 254 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 THBS2P35442 1172 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 CDKN2AP42771 156 aaKnown RBP5.02□□□□□ -1.61
RFFL-202ENST00000394597 GABRA4P48169 554 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 NUBP1P53384 320 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 CLDN15P56746 228 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 TAS2R46P59540 309 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 EFNB1P98172 346 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 ZNF92Q03936 586 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 SHBQ15464 509 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 WIPI1Q5MNZ9 446 aaPredicted RBP5.02□□□□□ -1.61
RFFL-202ENST00000394597 Q5PR19 223 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 ZNF343Q6P1L6 599 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 LCN15Q6UWW0 184 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 PLXDC2Q6UX71 529 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 FAM57BQ71RH2 274 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 TMPRSS7Q7RTY8 843 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 ZNF695Q8IW36 515 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 KLHDC1Q8N7A1 406 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 CNEP1R1Q8N9A8 125 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 SUMF1Q8NBK3 374 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 ZNF485Q8NCK3 441 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 OR13D1Q8NGV5 346 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 BORCS7Q96B45 105 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 RPUSD4Q96CM3 377 aaKnown RBP5.02□□□□□ -1.61
RFFL-202ENST00000394597 CDH20Q9HBT6 801 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 ADGRL4Q9HBW9 690 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 BET1LQ9NYM9 111 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 OR52A1Q9UKL2 312 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 FLVCR1Q9Y5Y0 555 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 PLXNA2O75051 1894 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 OBSL1O75147 1896 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 HEATR5BQ9P2D3 2071 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 IGHV1-45A0A0A0MS14 117 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 TGIF2-C20orf24A0A0A6YYL0 155 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 A0A1W2PNV4 684 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 HSPB2A8KAH6 182 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 SLC17A2O00624 439 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 DVL1O14640 695 aa5.02□□□□□ -1.61
RFFL-202ENST00000394597 HYAL3O43820 417 aaPredicted RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms