RNA–Protein interactions for RNA: ENST00000393211.3

COL17A1-203, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL17A1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-203ENST00000393211 FAM230AA0A1W2PPH8 454 aa8.67□□□□□ -1.02
COL17A1-203ENST00000393211 OR6C6A6NF89 314 aa8.67□□□□□ -1.02
COL17A1-203ENST00000393211 CCDC85CA6NKD9 419 aa8.67□□□□□ -1.02
COL17A1-203ENST00000393211 A6NLC8 198 aa8.67□□□□□ -1.02
COL17A1-203ENST00000393211 TRDCB7Z8K6 153 aa8.67□□□□□ -1.02
COL17A1-203ENST00000393211 TIAF1O95411 115 aa8.67□□□□□ -1.02
COL17A1-203ENST00000393211 DIRAS3O95661 229 aa8.67□□□□□ -1.02
COL17A1-203ENST00000393211 NRASP01111 189 aa8.67□□□□□ -1.02
COL17A1-203ENST00000393211 TCN2P20062 427 aa8.67□□□□□ -1.02
COL17A1-203ENST00000393211 KLK2P20151 261 aa8.67□□□□□ -1.02
COL17A1-203ENST00000393211 OPRM1P35372 400 aa8.67□□□□□ -1.02
COL17A1-203ENST00000393211 RGS19P49795 217 aa8.67□□□□□ -1.02
COL17A1-203ENST00000393211 RRADP55042 308 aa8.67□□□□□ -1.02
COL17A1-203ENST00000393211 EWSR1Q01844 656 aaKnown RBP eCLIP8.67□□□□□ -1.02
COL17A1-203ENST00000393211 FABP9Q0Z7S8 132 aa8.67□□□□□ -1.02
COL17A1-203ENST00000393211 PCOLCEQ15113 449 aa8.67□□□□□ -1.02
COL17A1-203ENST00000393211 SP6Q3SY56 376 aa8.67□□□□□ -1.02
COL17A1-203ENST00000393211 HIKESHIQ53FT3 197 aa8.67□□□□□ -1.02
COL17A1-203ENST00000393211 AKIRIN2Q53H80 203 aa8.67□□□□□ -1.02
COL17A1-203ENST00000393211 SOHLH1Q5JUK2 328 aa8.67□□□□□ -1.02
COL17A1-203ENST00000393211 KRBOX4Q5JUW0 171 aa8.67□□□□□ -1.02
COL17A1-203ENST00000393211 SLC22A25Q6T423 547 aa8.67□□□□□ -1.02
COL17A1-203ENST00000393211 DPPA3Q6W0C5 159 aa8.67□□□□□ -1.02
COL17A1-203ENST00000393211 ETV3LQ6ZN32 361 aa8.67□□□□□ -1.02
COL17A1-203ENST00000393211 DTX1Q86Y01 620 aa8.67□□□□□ -1.02
COL17A1-203ENST00000393211 OR2C3Q8N628 320 aa8.67□□□□□ -1.02
COL17A1-203ENST00000393211 ZIC4Q8N9L1 334 aa8.67□□□□□ -1.02
COL17A1-203ENST00000393211 SUMF2Q8NBJ7 301 aa8.67□□□□□ -1.02
COL17A1-203ENST00000393211 Q8NFD4 153 aa8.67□□□□□ -1.02
COL17A1-203ENST00000393211 OR10AD1Q8NGE0 317 aa8.67□□□□□ -1.02
COL17A1-203ENST00000393211 OR14L1PQ8NHC6 308 aa8.67□□□□□ -1.02
COL17A1-203ENST00000393211 CPT1CQ8TCG5 803 aa8.67□□□□□ -1.02
COL17A1-203ENST00000393211 GNPNAT1Q96EK6 184 aaPredicted RBP8.67□□□□□ -1.02
COL17A1-203ENST00000393211 BSCL2Q96G97 398 aaPredicted RBP8.67□□□□□ -1.02
COL17A1-203ENST00000393211 YPEL4Q96NS1 127 aa8.67□□□□□ -1.02
COL17A1-203ENST00000393211 IP6K3Q96PC2 410 aa8.67□□□□□ -1.02
COL17A1-203ENST00000393211 TMEM222Q9H0R3 208 aa8.67□□□□□ -1.02
COL17A1-203ENST00000393211 TMPRSS5Q9H3S3 457 aa8.67□□□□□ -1.02
COL17A1-203ENST00000393211 PLEKHF2Q9H8W4 249 aa8.67□□□□□ -1.02
COL17A1-203ENST00000393211 GSN-AS1Q9NRJ2 163 aa8.67□□□□□ -1.02
COL17A1-203ENST00000393211 ZDHHC8Q9ULC8 765 aa8.67□□□□□ -1.02
COL17A1-203ENST00000393211 NCOA6Q14686 2063 aaPredicted RBP8.67□□□□□ -1.02
COL17A1-203ENST00000393211 UNC13CQ8NB66 2214 aa8.66□□□□□ -1.02
COL17A1-203ENST00000393211 IGKV1-27A0A075B6S5 117 aa8.66□□□□□ -1.02
COL17A1-203ENST00000393211 CCDC187A0A096LP49 1063 aa8.66□□□□□ -1.02
COL17A1-203ENST00000393211 C3orf85A0A1B0GTC6 90 aa8.66□□□□□ -1.02
COL17A1-203ENST00000393211 CLEC18AA5D8T8 446 aa8.66□□□□□ -1.02
COL17A1-203ENST00000393211 CXorf65A6NEN9 183 aa8.66□□□□□ -1.02
COL17A1-203ENST00000393211 ZNF732B4DXR9 585 aa8.66□□□□□ -1.02
COL17A1-203ENST00000393211 MPPED1O15442 326 aa8.66□□□□□ -1.02
COL17A1-203ENST00000393211 PHF1O43189 567 aaPredicted RBP8.66□□□□□ -1.02
COL17A1-203ENST00000393211 SPRY1O43609 319 aaPredicted RBP8.66□□□□□ -1.02
COL17A1-203ENST00000393211 ZIC3O60481 467 aa8.66□□□□□ -1.02
COL17A1-203ENST00000393211 DBHP09172 617 aa8.66□□□□□ -1.02
COL17A1-203ENST00000393211 FUT3P21217 361 aa8.66□□□□□ -1.02
COL17A1-203ENST00000393211 PCBD1P61457 104 aa8.66□□□□□ -1.02
COL17A1-203ENST00000393211 BAXQ07812 192 aa8.66□□□□□ -1.02
COL17A1-203ENST00000393211 CHAF1BQ13112 559 aa8.66□□□□□ -1.02
COL17A1-203ENST00000393211 DMRTC1Q5HYR2 192 aa8.66□□□□□ -1.02
COL17A1-203ENST00000393211 WDR5BQ86VZ2 330 aa8.66□□□□□ -1.02
COL17A1-203ENST00000393211 PPP1R3BQ86XI6 285 aa8.66□□□□□ -1.02
COL17A1-203ENST00000393211 FBXL14Q8N1E6 418 aa8.66□□□□□ -1.02
COL17A1-203ENST00000393211 ZNF565Q8N9K5 539 aa8.66□□□□□ -1.02
COL17A1-203ENST00000393211 CLEC18CQ8NCF0 446 aa8.66□□□□□ -1.02
COL17A1-203ENST00000393211 OR52M1Q8NGK5 317 aa8.66□□□□□ -1.02
COL17A1-203ENST00000393211 M1APQ8TC57 530 aa8.66□□□□□ -1.02
COL17A1-203ENST00000393211 ZNF700Q9H0M5 742 aa8.66□□□□□ -1.02
COL17A1-203ENST00000393211 SH2D2AQ9NP31 389 aa8.66□□□□□ -1.02
COL17A1-203ENST00000393211 KIAA1456Q9P272 454 aa8.66□□□□□ -1.02
COL17A1-203ENST00000393211 IGHV5-10-1A0A0J9YXX1 117 aa8.65□□□□□ -1.02
COL17A1-203ENST00000393211 RBFOX3A6NFN3 312 aa8.65□□□□□ -1.02
COL17A1-203ENST00000393211 GEMIN2O14893 280 aaKnown RBP8.65□□□□□ -1.02
COL17A1-203ENST00000393211 XRCC2O43543 280 aa8.65□□□□□ -1.02
COL17A1-203ENST00000393211 ANGPTL7O43827 346 aa8.65□□□□□ -1.02
COL17A1-203ENST00000393211 CBR3O75828 277 aa8.65□□□□□ -1.02
COL17A1-203ENST00000393211 PPYP01298 95 aa8.65□□□□□ -1.02
COL17A1-203ENST00000393211 CEACAM1P13688 526 aa8.65□□□□□ -1.02
COL17A1-203ENST00000393211 AKR1C3P42330 323 aa8.65□□□□□ -1.02
COL17A1-203ENST00000393211 NKX2-1P43699 371 aaPredicted RBP8.65□□□□□ -1.02
COL17A1-203ENST00000393211 RBM11P57052 281 aaKnown RBP8.65□□□□□ -1.02
COL17A1-203ENST00000393211 FXYD4P59646 89 aa8.65□□□□□ -1.02
COL17A1-203ENST00000393211 RAC3P60763 192 aa8.65□□□□□ -1.02
COL17A1-203ENST00000393211 NHLH2Q02577 135 aa8.65□□□□□ -1.02
COL17A1-203ENST00000393211 FOXO1Q12778 655 aa8.65□□□□□ -1.02
COL17A1-203ENST00000393211 PHLDA2Q53GA4 152 aa8.65□□□□□ -1.02
COL17A1-203ENST00000393211 PRAMEF20Q5VT98 475 aa8.65□□□□□ -1.02
COL17A1-203ENST00000393211 RAET1LQ5VY80 246 aa8.65□□□□□ -1.02
COL17A1-203ENST00000393211 SP5Q6BEB4 398 aaPredicted RBP8.65□□□□□ -1.02
COL17A1-203ENST00000393211 HEPN1Q6WQI6 88 aa8.65□□□□□ -1.02
COL17A1-203ENST00000393211 DPPA2Q7Z7J5 298 aa8.65□□□□□ -1.02
COL17A1-203ENST00000393211 SLC35G3Q8N808 338 aa8.65□□□□□ -1.02
COL17A1-203ENST00000393211 HSD17B11Q8NBQ5 300 aa8.65□□□□□ -1.02
COL17A1-203ENST00000393211 OR5L1Q8NGL2 311 aa8.65□□□□□ -1.02
COL17A1-203ENST00000393211 FAM213BQ8TBF2 198 aa8.65□□□□□ -1.02
COL17A1-203ENST00000393211 CD300LFQ8TDQ1 290 aa8.65□□□□□ -1.02
COL17A1-203ENST00000393211 KCNE4Q8WWG9 221 aa8.65□□□□□ -1.02
COL17A1-203ENST00000393211 IL22RA2Q969J5 263 aa8.65□□□□□ -1.02
COL17A1-203ENST00000393211 PAPOLGQ9BWT3 736 aaKnown RBP8.65□□□□□ -1.02
COL17A1-203ENST00000393211 PARP12Q9H0J9 701 aaKnown RBP8.65□□□□□ -1.02
COL17A1-203ENST00000393211 NIT2Q9NQR4 276 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms