RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 PPP1CBP62140 327 aa12.81□□□□□ -0.36
MKS1-202ENST00000393119 ARFRP1Q13795 201 aa12.81□□□□□ -0.36
MKS1-202ENST00000393119 OR56B1Q8NGI3 324 aa12.81□□□□□ -0.36
MKS1-202ENST00000393119 S100PBPQ96BU1 408 aa12.81□□□□□ -0.36
MKS1-202ENST00000393119 DMRTA2Q96SC8 542 aa12.81□□□□□ -0.36
MKS1-202ENST00000393119 URM1Q9BTM9 101 aaKnown RBP12.81□□□□□ -0.36
MKS1-202ENST00000393119 CDH20Q9HBT6 801 aa12.81□□□□□ -0.36
MKS1-202ENST00000393119 ZNF391Q9UJN7 358 aa12.81□□□□□ -0.36
MKS1-202ENST00000393119 A0A0A6YYH2 397 aa12.81□□□□□ -0.36
MKS1-202ENST00000393119 PQLC2LA1A4F0 135 aa12.81□□□□□ -0.36
MKS1-202ENST00000393119 A6NJ64 397 aa12.81□□□□□ -0.36
MKS1-202ENST00000393119 DNASE2O00115 360 aaPredicted RBP12.81□□□□□ -0.36
MKS1-202ENST00000393119 ABCD4O14678 606 aa12.81□□□□□ -0.36
MKS1-202ENST00000393119 RHBDL1O75783 438 aa12.81□□□□□ -0.36
MKS1-202ENST00000393119 CHRM2P08172 466 aa12.81□□□□□ -0.36
MKS1-202ENST00000393119 UCP2P55851 309 aa12.81□□□□□ -0.36
MKS1-202ENST00000393119 GFRALQ6UXV0 394 aa12.81□□□□□ -0.36
MKS1-202ENST00000393119 BHLHA15Q7RTS1 189 aaPredicted RBP12.81□□□□□ -0.36
MKS1-202ENST00000393119 ZDHHC23Q8IYP9 409 aa12.81□□□□□ -0.36
MKS1-202ENST00000393119 C17orf78Q8N4C9 275 aa12.81□□□□□ -0.36
MKS1-202ENST00000393119 BPIFB2Q8N4F0 458 aa12.81□□□□□ -0.36
MKS1-202ENST00000393119 SCARB1Q8WTV0 552 aa12.81□□□□□ -0.36
MKS1-202ENST00000393119 ELMOD3Q96FG2 381 aa12.81□□□□□ -0.36
MKS1-202ENST00000393119 CA10Q9NS85 328 aa12.81□□□□□ -0.36
MKS1-202ENST00000393119 MTCH1Q9NZJ7 389 aa12.81□□□□□ -0.36
MKS1-202ENST00000393119 IGHV1-18A0A0C4DH31 117 aa12.8□□□□□ -0.36
MKS1-202ENST00000393119 A0A0G2JNJ9 132 aa12.8□□□□□ -0.36
MKS1-202ENST00000393119 FIGNL2A6NMB9 653 aa12.8□□□□□ -0.36
MKS1-202ENST00000393119 EEF1E1-BLOC1S5C9J1V9 151 aa12.8□□□□□ -0.36
MKS1-202ENST00000393119 SDCBPO00560 298 aaPredicted RBP12.8□□□□□ -0.36
MKS1-202ENST00000393119 IGKV3-15P01624 115 aa12.8□□□□□ -0.36
MKS1-202ENST00000393119 UBBP0CG47 229 aa12.8□□□□□ -0.36
MKS1-202ENST00000393119 HOXB1P14653 301 aaPredicted RBP12.8□□□□□ -0.36
MKS1-202ENST00000393119 ZNF83P51522 516 aa12.8□□□□□ -0.36
MKS1-202ENST00000393119 TMPRSS3P57727 454 aa12.8□□□□□ -0.36
MKS1-202ENST00000393119 TAS2R19P59542 299 aa12.8□□□□□ -0.36
MKS1-202ENST00000393119 PSG7Q13046 419 aa12.8□□□□□ -0.36
MKS1-202ENST00000393119 METTL11BQ5VVY1 283 aa12.8□□□□□ -0.36
MKS1-202ENST00000393119 WDR86Q86TI4 376 aa12.8□□□□□ -0.36
MKS1-202ENST00000393119 TMEM229BQ8NBD8 167 aa12.8□□□□□ -0.36
MKS1-202ENST00000393119 SULT4A1Q9BR01 284 aa12.8□□□□□ -0.36
MKS1-202ENST00000393119 MGAT4CQ9UBM8 478 aa12.8□□□□□ -0.36
MKS1-202ENST00000393119 Q9UFV3 132 aa12.8□□□□□ -0.36
MKS1-202ENST00000393119 ST3GAL6Q9Y274 331 aa12.8□□□□□ -0.36
MKS1-202ENST00000393119 PRELID3BQ9Y3B1 194 aa12.8□□□□□ -0.36
MKS1-202ENST00000393119 HSPB6O14558 160 aa12.8□□□□□ -0.36
MKS1-202ENST00000393119 ACTBP60709 375 aa12.8□□□□□ -0.36
MKS1-202ENST00000393119 ACTG1P63261 375 aa12.8□□□□□ -0.36
MKS1-202ENST00000393119 MSMPQ1L6U9 139 aa12.8□□□□□ -0.36
MKS1-202ENST00000393119 MICBQ29980 383 aa12.8□□□□□ -0.36
MKS1-202ENST00000393119 CEACAM21Q3KPI0 293 aa12.8□□□□□ -0.36
MKS1-202ENST00000393119 KRTCAP3Q53RY4 240 aa12.8□□□□□ -0.36
MKS1-202ENST00000393119 HAGHLQ6PII5 290 aaPredicted RBP12.8□□□□□ -0.36
MKS1-202ENST00000393119 CCDC54Q8NEL0 328 aa12.8□□□□□ -0.36
MKS1-202ENST00000393119 OR13C8Q8NGS7 320 aa12.8□□□□□ -0.36
MKS1-202ENST00000393119 OR1S1Q8NH92 325 aa12.8□□□□□ -0.36
MKS1-202ENST00000393119 TM2D1Q9BX74 207 aa12.8□□□□□ -0.36
MKS1-202ENST00000393119 SCPEP1Q9HB40 452 aa12.8□□□□□ -0.36
MKS1-202ENST00000393119 PLEKHJ1Q9NW61 149 aa12.8□□□□□ -0.36
MKS1-202ENST00000393119 UBE2QL1A1L167 161 aa12.79□□□□□ -0.36
MKS1-202ENST00000393119 NAP1L6A6NFF2 107 aa12.79□□□□□ -0.36
MKS1-202ENST00000393119 SULT1C2O00338 296 aa12.79□□□□□ -0.36
MKS1-202ENST00000393119 CBR1P16152 277 aa12.79□□□□□ -0.36
MKS1-202ENST00000393119 HOXC12P31275 282 aa12.79□□□□□ -0.36
MKS1-202ENST00000393119 FABP6P51161 128 aa12.79□□□□□ -0.36
MKS1-202ENST00000393119 RAP2BP61225 183 aa12.79□□□□□ -0.36
MKS1-202ENST00000393119 SNTB1Q13884 538 aaKnown RBP12.79□□□□□ -0.36
MKS1-202ENST00000393119 C2orf68Q2NKX9 166 aa12.79□□□□□ -0.36
MKS1-202ENST00000393119 ATRAIDQ6UW56 229 aa12.79□□□□□ -0.36
MKS1-202ENST00000393119 GLDNQ6ZMI3 551 aaPredicted RBP12.79□□□□□ -0.36
MKS1-202ENST00000393119 Q6ZPA2 131 aa12.79□□□□□ -0.36
MKS1-202ENST00000393119 TMED4Q7Z7H5 227 aa12.79□□□□□ -0.36
MKS1-202ENST00000393119 OR10AD1Q8NGE0 317 aa12.79□□□□□ -0.36
MKS1-202ENST00000393119 OR5P3Q8WZ94 311 aa12.79□□□□□ -0.36
MKS1-202ENST00000393119 MPTX1A8MV57 137 aa12.79□□□□□ -0.36
MKS1-202ENST00000393119 L7N2F9 121 aa12.79□□□□□ -0.36
MKS1-202ENST00000393119 LGALS8O00214 317 aa12.79□□□□□ -0.36
MKS1-202ENST00000393119 ATXN7O15265 892 aaPredicted RBP12.79□□□□□ -0.36
MKS1-202ENST00000393119 H2AFB1P0C5Y9 115 aa12.79□□□□□ -0.36
MKS1-202ENST00000393119 ZNF35P13682 527 aa12.79□□□□□ -0.36
MKS1-202ENST00000393119 NFYAP23511 347 aaPredicted RBP12.79□□□□□ -0.36
MKS1-202ENST00000393119 OPRM1P35372 400 aa12.79□□□□□ -0.36
MKS1-202ENST00000393119 CBX5P45973 191 aa12.79□□□□□ -0.36
MKS1-202ENST00000393119 CAPZA1P52907 286 aa12.79□□□□□ -0.36
MKS1-202ENST00000393119 ASCL4Q6XD76 172 aa12.79□□□□□ -0.36
MKS1-202ENST00000393119 CLRN3Q8NCR9 226 aa12.79□□□□□ -0.36
MKS1-202ENST00000393119 KLF14Q8TD94 323 aaPredicted RBP12.79□□□□□ -0.36
MKS1-202ENST00000393119 FN3KRPQ9HA64 309 aa12.79□□□□□ -0.36
MKS1-202ENST00000393119 ZNF701Q9NV72 531 aaPredicted RBP12.79□□□□□ -0.36
MKS1-202ENST00000393119 TAS2R8Q9NYW2 309 aa12.79□□□□□ -0.36
MKS1-202ENST00000393119 OR5H1A6NKK0 313 aa12.78□□□□□ -0.36
MKS1-202ENST00000393119 OR2AT4A6NND4 320 aa12.78□□□□□ -0.36
MKS1-202ENST00000393119 HMSDA8MTL9 139 aa12.78□□□□□ -0.36
MKS1-202ENST00000393119 CST4P01036 141 aa12.78□□□□□ -0.36
MKS1-202ENST00000393119 CD74P04233 296 aa12.78□□□□□ -0.36
MKS1-202ENST00000393119 FLI1Q01543 452 aaPredicted RBP12.78□□□□□ -0.36
MKS1-202ENST00000393119 OSR2Q8N2R0 312 aa12.78□□□□□ -0.36
MKS1-202ENST00000393119 GTF3AQ92664 365 aaKnown RBP12.78□□□□□ -0.36
MKS1-202ENST00000393119 MRPS24Q96EL2 167 aaKnown RBP12.78□□□□□ -0.36
MKS1-202ENST00000393119 GHRLQ9UBU3 117 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms