RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 AWAT2Q6E213 333 aa11.06□□□□□ -0.64
USP44-202ENST00000393091 NPRL2Q8WTW4 380 aa11.06□□□□□ -0.64
USP44-202ENST00000393091 SNX22Q96L94 193 aa11.06□□□□□ -0.64
USP44-202ENST00000393091 DCSTAMPQ9H295 470 aa11.06□□□□□ -0.64
USP44-202ENST00000393091 LINC00574Q9H8X3 128 aa11.06□□□□□ -0.64
USP44-202ENST00000393091 RABL2AQ9UBK7 228 aaPredicted RBP11.06□□□□□ -0.64
USP44-202ENST00000393091 RABL2BQ9UNT1 228 aa11.06□□□□□ -0.64
USP44-202ENST00000393091 TRBV6-6A0A0A6YYG2 114 aa11.05□□□□□ -0.64
USP44-202ENST00000393091 TMEM272A0A1B0GTI8 110 aa11.05□□□□□ -0.64
USP44-202ENST00000393091 FCN3O75636 299 aa11.05□□□□□ -0.64
USP44-202ENST00000393091 RSU1Q15404 277 aa11.05□□□□□ -0.64
USP44-202ENST00000393091 C2orf76Q3KRA6 126 aa11.05□□□□□ -0.64
USP44-202ENST00000393091 JAGN1Q8N5M9 183 aa11.05□□□□□ -0.64
USP44-202ENST00000393091 BPESC1Q9GZL8 116 aa11.05□□□□□ -0.64
USP44-202ENST00000393091 SPACA1Q9HBV2 294 aa11.05□□□□□ -0.64
USP44-202ENST00000393091 EXOSC4Q9NPD3 245 aaKnown RBP11.05□□□□□ -0.64
USP44-202ENST00000393091 UFSP2Q9NUQ7 469 aa11.05□□□□□ -0.64
USP44-202ENST00000393091 OR5V1Q9UGF6 321 aa11.05□□□□□ -0.64
USP44-202ENST00000393091 FASNP49327 2511 aaKnown RBP11.05□□□□□ -0.64
USP44-202ENST00000393091 A6NLC8 198 aa11.05□□□□□ -0.64
USP44-202ENST00000393091 ARSBP15848 533 aa11.05□□□□□ -0.64
USP44-202ENST00000393091 USF1P22415 310 aaPredicted RBP11.05□□□□□ -0.64
USP44-202ENST00000393091 CD80P33681 288 aa11.05□□□□□ -0.64
USP44-202ENST00000393091 FOXB2Q5VYV0 432 aa11.05□□□□□ -0.64
USP44-202ENST00000393091 RAB39BQ96DA2 213 aa11.05□□□□□ -0.64
USP44-202ENST00000393091 NEIL1Q96FI4 390 aaPredicted RBP11.05□□□□□ -0.64
USP44-202ENST00000393091 COX4I2Q96KJ9 171 aa11.05□□□□□ -0.64
USP44-202ENST00000393091 GPER1Q99527 375 aa11.05□□□□□ -0.64
USP44-202ENST00000393091 LPAR5Q9H1C0 372 aa11.05□□□□□ -0.64
USP44-202ENST00000393091 RBFOX1Q9NWB1 397 aaKnown RBP11.05□□□□□ -0.64
USP44-202ENST00000393091 LPAR3Q9UBY5 353 aa11.05□□□□□ -0.64
USP44-202ENST00000393091 DPPA5A6NC42 116 aa11.04□□□□□ -0.64
USP44-202ENST00000393091 LYNX1G3V0Z9 82 aa11.04□□□□□ -0.64
USP44-202ENST00000393091 K7N7A8 449 aa11.04□□□□□ -0.64
USP44-202ENST00000393091 SH2D1BO14796 132 aa11.04□□□□□ -0.64
USP44-202ENST00000393091 LY6HO94772 140 aa11.04□□□□□ -0.64
USP44-202ENST00000393091 CLEC2LP0C7M8 214 aa11.04□□□□□ -0.64
USP44-202ENST00000393091 OCMP0CE72 109 aaPredicted RBP11.04□□□□□ -0.64
USP44-202ENST00000393091 LYNX1P0DP58 116 aa11.04□□□□□ -0.64
USP44-202ENST00000393091 PRDX2P32119 198 aa11.04□□□□□ -0.64
USP44-202ENST00000393091 KIR3DL3Q8N743 410 aa11.04□□□□□ -0.64
USP44-202ENST00000393091 OR5D13Q8NGL4 314 aa11.04□□□□□ -0.64
USP44-202ENST00000393091 CLDND2Q8NHS1 167 aa11.04□□□□□ -0.64
USP44-202ENST00000393091 NDNFQ8TB73 568 aa11.04□□□□□ -0.64
USP44-202ENST00000393091 CORO2AQ92828 525 aa11.04□□□□□ -0.64
USP44-202ENST00000393091 EMG1Q92979 244 aaKnown RBP11.04□□□□□ -0.64
USP44-202ENST00000393091 SPACA5Q96QH8 159 aa11.04□□□□□ -0.64
USP44-202ENST00000393091 REG4Q9BYZ8 158 aa11.04□□□□□ -0.64
USP44-202ENST00000393091 SHARPINQ9H0F6 387 aa11.04□□□□□ -0.64
USP44-202ENST00000393091 LIN7BQ9HAP6 207 aa11.04□□□□□ -0.64
USP44-202ENST00000393091 SLC33A1O00400 549 aaPredicted RBP11.04□□□□□ -0.64
USP44-202ENST00000393091 WNT9BO14905 357 aa11.04□□□□□ -0.64
USP44-202ENST00000393091 NXPH2O95156 264 aa11.04□□□□□ -0.64
USP44-202ENST00000393091 PPIAL4GP0DN37 164 aa11.04□□□□□ -0.64
USP44-202ENST00000393091 ART1P52961 327 aa11.04□□□□□ -0.64
USP44-202ENST00000393091 AP3S1Q92572 193 aa11.04□□□□□ -0.64
USP44-202ENST00000393091 TMEM160Q9NX00 188 aa11.04□□□□□ -0.64
USP44-202ENST00000393091 NKX6-3A6NJ46 265 aa11.04□□□□□ -0.64
USP44-202ENST00000393091 CEACAM18A8MTB9 384 aa11.04□□□□□ -0.64
USP44-202ENST00000393091 HAND1O96004 215 aa11.04□□□□□ -0.64
USP44-202ENST00000393091 RBP4P02753 201 aa11.04□□□□□ -0.64
USP44-202ENST00000393091 MGMTP16455 207 aa11.04□□□□□ -0.64
USP44-202ENST00000393091 TGFBR1P36897 503 aa11.04□□□□□ -0.64
USP44-202ENST00000393091 TMUB1Q9BVT8 246 aa11.04□□□□□ -0.64
USP44-202ENST00000393091 SLIRPQ9GZT3 109 aaKnown RBP11.04□□□□□ -0.64
USP44-202ENST00000393091 WDR13Q9H1Z4 485 aa11.04□□□□□ -0.64
USP44-202ENST00000393091 TRBV23-1A0A0A0MS06 115 aa11.03□□□□□ -0.64
USP44-202ENST00000393091 PPIHO43447 177 aaKnown RBP11.03□□□□□ -0.64
USP44-202ENST00000393091 SERPINB10P48595 397 aa11.03□□□□□ -0.64
USP44-202ENST00000393091 POU3F4P49335 361 aa11.03□□□□□ -0.64
USP44-202ENST00000393091 IL13RA1P78552 427 aa11.03□□□□□ -0.64
USP44-202ENST00000393091 C17orf107Q6ZR85 190 aa11.03□□□□□ -0.64
USP44-202ENST00000393091 SLC36A1Q7Z2H8 476 aa11.03□□□□□ -0.64
USP44-202ENST00000393091 RAB40AQ8WXH6 277 aa11.03□□□□□ -0.64
USP44-202ENST00000393091 WDFY2Q96P53 400 aa11.03□□□□□ -0.64
USP44-202ENST00000393091 GAL3ST1Q99999 423 aa11.03□□□□□ -0.64
USP44-202ENST00000393091 CTSZQ9UBR2 303 aa11.03□□□□□ -0.64
USP44-202ENST00000393091 ING4Q9UNL4 249 aa11.03□□□□□ -0.64
USP44-202ENST00000393091 CENPEQ02224 2701 aa11.03□□□□□ -0.64
USP44-202ENST00000393091 ANGPTL7O43827 346 aa11.03□□□□□ -0.64
USP44-202ENST00000393091 MEF2CQ06413 473 aaPredicted RBP11.03□□□□□ -0.64
USP44-202ENST00000393091 UBE2NLQ5JXB2 153 aa11.03□□□□□ -0.64
USP44-202ENST00000393091 SIGIRRQ6IA17 410 aa11.03□□□□□ -0.64
USP44-202ENST00000393091 ZNF880Q6PDB4 577 aa11.03□□□□□ -0.64
USP44-202ENST00000393091 Q6ZS49 121 aa11.03□□□□□ -0.64
USP44-202ENST00000393091 C1orf122Q6ZSJ8 110 aa11.03□□□□□ -0.64
USP44-202ENST00000393091 ZNF554Q86TJ5 538 aa11.03□□□□□ -0.64
USP44-202ENST00000393091 TMEM104Q8NE00 496 aa11.03□□□□□ -0.64
USP44-202ENST00000393091 RFT1Q96AA3 541 aa11.03□□□□□ -0.64
USP44-202ENST00000393091 S100A13Q99584 98 aa11.03□□□□□ -0.64
USP44-202ENST00000393091 A0A0A6YYD4 124 aa11.02□□□□□ -0.64
USP44-202ENST00000393091 IGHV4-61A0A0C4DH41 118 aa11.02□□□□□ -0.64
USP44-202ENST00000393091 NOL3O60936 208 aaKnown RBP11.02□□□□□ -0.64
USP44-202ENST00000393091 PRKACAP17612 351 aa11.02□□□□□ -0.64
USP44-202ENST00000393091 GATA3P23771 443 aa11.02□□□□□ -0.64
USP44-202ENST00000393091 CHATP28329 748 aa11.02□□□□□ -0.64
USP44-202ENST00000393091 ARL6IP1Q15041 203 aa11.02□□□□□ -0.64
USP44-202ENST00000393091 Q96MF0 132 aa11.02□□□□□ -0.64
USP44-202ENST00000393091 ZNF488Q96MN9 340 aa11.02□□□□□ -0.64
USP44-202ENST00000393091 MAB21L2Q9Y586 359 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms