RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 TMEM229AB2RXF0 380 aa6.76□□□□□ -1.33
VTI1A-201ENST00000393077 C22orf46C9J442 243 aa6.76□□□□□ -1.33
VTI1A-201ENST00000393077 ADRA2CP18825 462 aa6.76□□□□□ -1.33
VTI1A-201ENST00000393077 SNU13P55769 128 aaKnown RBP6.76□□□□□ -1.33
VTI1A-201ENST00000393077 GABRA6Q16445 453 aa6.76□□□□□ -1.33
VTI1A-201ENST00000393077 THSD4Q6ZMP0 1018 aa6.76□□□□□ -1.33
VTI1A-201ENST00000393077 CLEC18CQ8NCF0 446 aa6.76□□□□□ -1.33
VTI1A-201ENST00000393077 ZNF740Q8NDX6 193 aa6.76□□□□□ -1.33
VTI1A-201ENST00000393077 SGCZQ96LD1 299 aa6.76□□□□□ -1.33
VTI1A-201ENST00000393077 WFDC6Q9BQY6 131 aa6.76□□□□□ -1.33
VTI1A-201ENST00000393077 GLIPR2Q9H4G4 154 aa6.76□□□□□ -1.33
VTI1A-201ENST00000393077 MBNL1Q9NR56 388 aaKnown RBP6.76□□□□□ -1.33
VTI1A-201ENST00000393077 PLAGL1Q9UM63 463 aa6.76□□□□□ -1.33
VTI1A-201ENST00000393077 PPIL1Q9Y3C6 166 aa6.76□□□□□ -1.33
VTI1A-201ENST00000393077 KIR2DL5BA0A0G2JN68 375 aa6.76□□□□□ -1.33
VTI1A-201ENST00000393077 KIR2DL5BA0A0G2JPC4 375 aa6.76□□□□□ -1.33
VTI1A-201ENST00000393077 A0A1B0GTH9 108 aa6.76□□□□□ -1.33
VTI1A-201ENST00000393077 A0A1W2PP55 124 aa6.76□□□□□ -1.33
VTI1A-201ENST00000393077 SCGB2A1O75556 95 aa6.76□□□□□ -1.33
VTI1A-201ENST00000393077 GABRA3P34903 492 aa6.76□□□□□ -1.33
VTI1A-201ENST00000393077 SLAQ13239 276 aa6.76□□□□□ -1.33
VTI1A-201ENST00000393077 TMEM240Q5SV17 173 aa6.76□□□□□ -1.33
VTI1A-201ENST00000393077 C5orf24Q7Z6I8 188 aa6.76□□□□□ -1.33
VTI1A-201ENST00000393077 ATOH7Q8N100 152 aa6.76□□□□□ -1.33
VTI1A-201ENST00000393077 KIR2DL5AQ8N109 375 aa6.76□□□□□ -1.33
VTI1A-201ENST00000393077 FOXN4Q96NZ1 517 aa6.76□□□□□ -1.33
VTI1A-201ENST00000393077 LPAR4Q99677 370 aa6.76□□□□□ -1.33
VTI1A-201ENST00000393077 TET1Q8NFU7 2136 aa6.76□□□□□ -1.33
VTI1A-201ENST00000393077 PLXNB2O15031 1838 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 FAM24AA6NFZ4 105 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 CORTO00230 105 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 PHF1O43189 567 aaPredicted RBP6.75□□□□□ -1.33
VTI1A-201ENST00000393077 CTSVO60911 334 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 CD22P20273 847 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 PIGPP57054 158 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 PAX2Q02962 417 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 MEP1BQ16820 701 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 PHLDA2Q53GA4 152 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 LINC01551Q86U37 167 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 OR51A2Q8NGJ7 313 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 OR4D5Q8NGN0 318 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 OR5C1Q8NGR4 320 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 RTN4IP1Q8WWV3 396 aaPredicted RBP6.75□□□□□ -1.33
VTI1A-201ENST00000393077 VN1R3Q9BXE9 311 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 TMEM59Q9BXS4 323 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 VN1R1Q9GZP7 353 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 KCNS2Q9ULS6 477 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 SRPK3Q9UPE1 567 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 PTPRZ1P23471 2315 aaPredicted RBP6.75□□□□□ -1.33
VTI1A-201ENST00000393077 TRAPPC2LH3BP13 241 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 RPL36A-HNRNPH2H7BZ11 118 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 RBFOX2O43251 390 aaKnown RBP eCLIP6.75□□□□□ -1.33
VTI1A-201ENST00000393077 NRASP01111 189 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 KRASP01116 189 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 IL2RAP01589 272 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 IGLV3-27P01718 113 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 STAG3L2P0CL84 134 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 HOXB2P14652 356 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 CCR2P41597 374 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 RPS27P42677 84 aaKnown RBP6.75□□□□□ -1.33
VTI1A-201ENST00000393077 RUNX3Q13761 415 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 MRPL2Q5T653 305 aaKnown RBP6.75□□□□□ -1.33
VTI1A-201ENST00000393077 MRGPREQ86SM8 312 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 OR2C3Q8N628 320 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 AQP3Q92482 292 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 ERGIC1Q969X5 290 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 EID2BQ96D98 161 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 ZNF286AQ9HBT8 521 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 KCNIP1Q9NZI2 227 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 KLK13Q9UKR3 277 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 RP1L1Q8IWN7 2480 aaPredicted RBP6.75□□□□□ -1.33
VTI1A-201ENST00000393077 WDR81Q562E7 1941 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 TRBV6-7A0A0A0MS04 114 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 A0A1B0GU03 582 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 H0Y8G0 127 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 LATO43561 262 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 NPIPB7O75200 414 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 ZNF253O75346 499 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 CTXN2P0C2S0 81 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 BCL2P10415 239 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 ZNF43P17038 809 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 ECI1P42126 302 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 CNN3Q15417 329 aaKnown RBP6.75□□□□□ -1.33
VTI1A-201ENST00000393077 TMEM95Q3KNT9 176 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 SP6Q3SY56 376 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 HSD11B1LQ7Z5J1 315 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 RFLNBQ8N5W9 214 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 OR1N2Q8NGR9 330 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 SP7Q8TDD2 431 aaPredicted RBP6.75□□□□□ -1.33
VTI1A-201ENST00000393077 TM4SF18Q96CE8 201 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 IL17FQ96PD4 163 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 MAGT1Q9H0U3 335 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 WDR76Q9H967 626 aa6.75□□□□□ -1.33
VTI1A-201ENST00000393077 FEZF1A0PJY2 475 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 IGLON5A6NGN9 336 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 SSSCA1O60232 199 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 SLC16A7O60669 478 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 CD160O95971 181 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 NUDT3O95989 172 aa6.74□□□□□ -1.33
VTI1A-201ENST00000393077 ZNF728P0DKX0 622 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms