RNA–Protein interactions for RNA: ENST00000390495.1

TRAJ42-201, Transcript of T cell receptor alpha joining 42, humanhuman

APPRIS P1 BASIC

Gene TRAJ42, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ42-201ENST00000390495 TIMM10BQ9Y5J6 103 aa-3.89□□□□□ -3.03
TRAJ42-201ENST00000390495 SMARCA4P51532 1647 aa-3.89□□□□□ -3.03
TRAJ42-201ENST00000390495 HTTP42858 3142 aa-3.89□□□□□ -3.03
TRAJ42-201ENST00000390495 IGHV3-73A0A0B4J1V6 119 aa-3.9□□□□□ -3.03
TRAJ42-201ENST00000390495 OR5H14A6NHG9 310 aa-3.9□□□□□ -3.03
TRAJ42-201ENST00000390495 LGALS8O00214 317 aa-3.9□□□□□ -3.03
TRAJ42-201ENST00000390495 SLC17A3O00476 420 aa-3.9□□□□□ -3.03
TRAJ42-201ENST00000390495 KERAO60938 352 aa-3.9□□□□□ -3.03
TRAJ42-201ENST00000390495 KRT16P08779 473 aa-3.9□□□□□ -3.03
TRAJ42-201ENST00000390495 P2RY1P47900 373 aa-3.9□□□□□ -3.03
TRAJ42-201ENST00000390495 PPP5CP53041 499 aa-3.9□□□□□ -3.03
TRAJ42-201ENST00000390495 SLC25A11Q02978 314 aaKnown RBP-3.9□□□□□ -3.03
TRAJ42-201ENST00000390495 ZNF345Q14585 488 aa-3.9□□□□□ -3.03
TRAJ42-201ENST00000390495 OR8G1Q15617 311 aa-3.9□□□□□ -3.03
TRAJ42-201ENST00000390495 MPV17LQ2QL34 196 aa-3.9□□□□□ -3.03
TRAJ42-201ENST00000390495 OR2A1Q8NGT9 310 aa-3.9□□□□□ -3.03
TRAJ42-201ENST00000390495 CD200R1Q8TD46 325 aa-3.9□□□□□ -3.03
TRAJ42-201ENST00000390495 SPRYD4Q8WW59 207 aaPredicted RBP-3.9□□□□□ -3.03
TRAJ42-201ENST00000390495 MAL2Q969L2 176 aa-3.9□□□□□ -3.03
TRAJ42-201ENST00000390495 NCLNQ969V3 563 aa-3.9□□□□□ -3.03
TRAJ42-201ENST00000390495 ROPN1BQ9BZX4 212 aaPredicted RBP-3.9□□□□□ -3.03
TRAJ42-201ENST00000390495 PXMP2Q9NR77 195 aa-3.9□□□□□ -3.03
TRAJ42-201ENST00000390495 RBFOX1Q9NWB1 397 aaKnown RBP-3.9□□□□□ -3.03
TRAJ42-201ENST00000390495 MRPL27Q9P0M9 148 aaKnown RBP-3.9□□□□□ -3.03
TRAJ42-201ENST00000390495 GNG12Q9UBI6 72 aa-3.9□□□□□ -3.03
TRAJ42-201ENST00000390495 CCL27Q9Y4X3 112 aa-3.9□□□□□ -3.03
TRAJ42-201ENST00000390495 FAM215AQ9Y5M1 114 aa-3.9□□□□□ -3.03
TRAJ42-201ENST00000390495 MTUS2Q5JR59 1369 aa-3.9□□□□□ -3.03
TRAJ42-201ENST00000390495 CARMIL1Q5VZK9 1371 aa-3.9□□□□□ -3.03
TRAJ42-201ENST00000390495 TMEM212A6NML5 194 aa-3.91□□□□□ -3.04
TRAJ42-201ENST00000390495 SYCE1LA8MT33 242 aa-3.91□□□□□ -3.04
TRAJ42-201ENST00000390495 GYPCP04921 128 aa-3.91□□□□□ -3.04
TRAJ42-201ENST00000390495 AKR1C2P52895 323 aa-3.91□□□□□ -3.04
TRAJ42-201ENST00000390495 AKR1C1Q04828 323 aa-3.91□□□□□ -3.04
TRAJ42-201ENST00000390495 APOFQ13790 326 aa-3.91□□□□□ -3.04
TRAJ42-201ENST00000390495 FHOD3Q2V2M9 1422 aa-3.91□□□□□ -3.04
TRAJ42-201ENST00000390495 MRPL55Q7Z7F7 128 aaKnown RBP-3.91□□□□□ -3.04
TRAJ42-201ENST00000390495 LHFPL4Q7Z7J7 247 aa-3.91□□□□□ -3.04
TRAJ42-201ENST00000390495 FANCMQ8IYD8 2048 aa-3.91□□□□□ -3.04
TRAJ42-201ENST00000390495 CLDN19Q8N6F1 224 aa-3.91□□□□□ -3.04
TRAJ42-201ENST00000390495 GIPC3Q8TF64 312 aa-3.91□□□□□ -3.04
TRAJ42-201ENST00000390495 TEKT1Q969V4 418 aa-3.91□□□□□ -3.04
TRAJ42-201ENST00000390495 MRPL48Q96GC5 212 aaKnown RBP-3.91□□□□□ -3.04
TRAJ42-201ENST00000390495 COPS8Q99627 209 aa-3.91□□□□□ -3.04
TRAJ42-201ENST00000390495 PRSS27Q9BQR3 290 aa-3.91□□□□□ -3.04
TRAJ42-201ENST00000390495 CHCHD6Q9BRQ6 235 aa-3.91□□□□□ -3.04
TRAJ42-201ENST00000390495 RBBP6Q7Z6E9 1792 aaKnown RBP-3.91□□□□□ -3.04
TRAJ42-201ENST00000390495 ABCA1O95477 2261 aa-3.92□□□□□ -3.04
TRAJ42-201ENST00000390495 SOX14O95416 240 aa-3.92□□□□□ -3.04
TRAJ42-201ENST00000390495 OR4A8P0C604 315 aa-3.92□□□□□ -3.04
TRAJ42-201ENST00000390495 CECR9P0C854 216 aa-3.92□□□□□ -3.04
TRAJ42-201ENST00000390495 AKT2P31751 481 aa-3.92□□□□□ -3.04
TRAJ42-201ENST00000390495 KIF5BP33176 963 aa-3.92□□□□□ -3.04
TRAJ42-201ENST00000390495 RHBDL3P58872 404 aa-3.92□□□□□ -3.04
TRAJ42-201ENST00000390495 PPP1R8Q12972 351 aaKnown RBP-3.92□□□□□ -3.04
TRAJ42-201ENST00000390495 GABRA6Q16445 453 aa-3.92□□□□□ -3.04
TRAJ42-201ENST00000390495 ACTBL2Q562R1 376 aa-3.92□□□□□ -3.04
TRAJ42-201ENST00000390495 SPRNQ5BIV9 151 aa-3.92□□□□□ -3.04
TRAJ42-201ENST00000390495 DLEU7Q6UYE1 221 aa-3.92□□□□□ -3.04
TRAJ42-201ENST00000390495 LINC00696Q6ZRV3 163 aa-3.92□□□□□ -3.04
TRAJ42-201ENST00000390495 CLEC20AQ6ZU45 233 aa-3.92□□□□□ -3.04
TRAJ42-201ENST00000390495 CATSPER4Q7RTX7 472 aa-3.92□□□□□ -3.04
TRAJ42-201ENST00000390495 CYP4Z1Q86W10 505 aa-3.92□□□□□ -3.04
TRAJ42-201ENST00000390495 BBS5Q8N3I7 341 aa-3.92□□□□□ -3.04
TRAJ42-201ENST00000390495 CCDC89Q8N998 374 aa-3.92□□□□□ -3.04
TRAJ42-201ENST00000390495 STXBP6Q8NFX7 210 aa-3.92□□□□□ -3.04
TRAJ42-201ENST00000390495 SPRR2FQ96RM1 72 aa-3.92□□□□□ -3.04
TRAJ42-201ENST00000390495 CHST6Q9GZX3 395 aa-3.92□□□□□ -3.04
TRAJ42-201ENST00000390495 AGPAT5Q9NUQ2 364 aa-3.92□□□□□ -3.04
TRAJ42-201ENST00000390495 GSTK1Q9Y2Q3 226 aa-3.92□□□□□ -3.04
TRAJ42-201ENST00000390495 SPTBN4Q9H254 2564 aa-3.92□□□□□ -3.04
TRAJ42-201ENST00000390495 SPTA1P02549 2419 aa-3.93□□□□□ -3.04
TRAJ42-201ENST00000390495 CEP192Q8TEP8 1941 aa-3.93□□□□□ -3.04
TRAJ42-201ENST00000390495 IGHV6-1A0A0B4J1U7 121 aa-3.93□□□□□ -3.04
TRAJ42-201ENST00000390495 LRRIQ3A6PVS8 624 aaPredicted RBP-3.93□□□□□ -3.04
TRAJ42-201ENST00000390495 ZNF728P0DKX0 622 aa-3.93□□□□□ -3.04
TRAJ42-201ENST00000390495 HMGB2P26583 209 aaKnown RBP-3.93□□□□□ -3.04
TRAJ42-201ENST00000390495 PLA2G16P53816 162 aa-3.93□□□□□ -3.04
TRAJ42-201ENST00000390495 FBXW4P57775 412 aa-3.93□□□□□ -3.04
TRAJ42-201ENST00000390495 ADIGQ0VDE8 80 aa-3.93□□□□□ -3.04
TRAJ42-201ENST00000390495 SNX1Q13596 522 aa-3.93□□□□□ -3.04
TRAJ42-201ENST00000390495 TMEM241Q24JQ0 296 aa-3.93□□□□□ -3.04
TRAJ42-201ENST00000390495 C1orf185Q5T7R7 199 aa-3.93□□□□□ -3.04
TRAJ42-201ENST00000390495 GALNT10Q86SR1 603 aa-3.93□□□□□ -3.04
TRAJ42-201ENST00000390495 C17orf78Q8N4C9 275 aa-3.93□□□□□ -3.04
TRAJ42-201ENST00000390495 FAM83FQ8NEG4 500 aaPredicted RBP-3.93□□□□□ -3.04
TRAJ42-201ENST00000390495 OR51L1Q8NGJ5 315 aa-3.93□□□□□ -3.04
TRAJ42-201ENST00000390495 ZNF396Q96N95 335 aaPredicted RBP-3.93□□□□□ -3.04
TRAJ42-201ENST00000390495 TESK2Q96S53 571 aa-3.93□□□□□ -3.04
TRAJ42-201ENST00000390495 ARPC5LQ9BPX5 153 aa-3.93□□□□□ -3.04
TRAJ42-201ENST00000390495 TSSK6Q9BXA6 273 aa-3.93□□□□□ -3.04
TRAJ42-201ENST00000390495 METTL17Q9H7H0 456 aaPredicted RBP-3.93□□□□□ -3.04
TRAJ42-201ENST00000390495 ROPN1Q9HAT0 212 aaPredicted RBP-3.93□□□□□ -3.04
TRAJ42-201ENST00000390495 ING4Q9UNL4 249 aa-3.93□□□□□ -3.04
TRAJ42-201ENST00000390495 TONSLQ96HA7 1378 aa-3.93□□□□□ -3.04
TRAJ42-201ENST00000390495 ANAPC1Q9H1A4 1944 aa-3.93□□□□□ -3.04
TRAJ42-201ENST00000390495 NRCAMQ92823 1304 aa-3.94□□□□□ -3.04
TRAJ42-201ENST00000390495 SMIM9A6NGZ8 99 aa-3.94□□□□□ -3.04
TRAJ42-201ENST00000390495 H7C1H1 209 aa-3.94□□□□□ -3.04
TRAJ42-201ENST00000390495 UBFD1O14562 309 aaKnown RBP-3.94□□□□□ -3.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms