RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 BCL2L15Q5TBC7 163 aa12.83□□□□□ -0.36
VCX3A-201ENST00000381089 TMEM42Q69YG0 159 aa12.83□□□□□ -0.36
VCX3A-201ENST00000381089 Q6ZS46 218 aa12.83□□□□□ -0.36
VCX3A-201ENST00000381089 OR8H2Q8N162 312 aa12.83□□□□□ -0.36
VCX3A-201ENST00000381089 BBS1Q8NFJ9 593 aa12.83□□□□□ -0.36
VCX3A-201ENST00000381089 CLEC7AQ9BXN2 247 aa12.83□□□□□ -0.36
VCX3A-201ENST00000381089 SESN1Q9Y6P5 492 aa12.83□□□□□ -0.36
VCX3A-201ENST00000381089 IGHV2-26A0A0B4J1V2 119 aa12.82□□□□□ -0.36
VCX3A-201ENST00000381089 DHRS7CA6NNS2 312 aa12.82□□□□□ -0.36
VCX3A-201ENST00000381089 FAM90A22PA8MWA6 464 aa12.82□□□□□ -0.36
VCX3A-201ENST00000381089 M0R129 80 aa12.82□□□□□ -0.36
VCX3A-201ENST00000381089 CASQ2O14958 399 aaPredicted RBP12.82□□□□□ -0.36
VCX3A-201ENST00000381089 TTRP02766 147 aa12.82□□□□□ -0.36
VCX3A-201ENST00000381089 HTR1DP28221 377 aa12.82□□□□□ -0.36
VCX3A-201ENST00000381089 ERVK11-1P61568 191 aa12.82□□□□□ -0.36
VCX3A-201ENST00000381089 CDK5Q00535 292 aa12.82□□□□□ -0.36
VCX3A-201ENST00000381089 EDDM3AQ14507 147 aa12.82□□□□□ -0.36
VCX3A-201ENST00000381089 SNAPC1Q16533 368 aa12.82□□□□□ -0.36
VCX3A-201ENST00000381089 LDLRAD2Q5SZI1 272 aa12.82□□□□□ -0.36
VCX3A-201ENST00000381089 OGFRL1Q5TC84 451 aaPredicted RBP12.82□□□□□ -0.36
VCX3A-201ENST00000381089 SLX4IPQ5VYV7 408 aa12.82□□□□□ -0.36
VCX3A-201ENST00000381089 C11orf87Q6NUJ2 197 aa12.82□□□□□ -0.36
VCX3A-201ENST00000381089 NRG4Q8WWG1 115 aa12.82□□□□□ -0.36
VCX3A-201ENST00000381089 SNX22Q96L94 193 aa12.82□□□□□ -0.36
VCX3A-201ENST00000381089 CEP19Q96LK0 163 aa12.82□□□□□ -0.36
VCX3A-201ENST00000381089 GABARAPL3Q9BY60 117 aa12.82□□□□□ -0.36
VCX3A-201ENST00000381089 TMEM133Q9H2Q1 129 aa12.82□□□□□ -0.36
VCX3A-201ENST00000381089 LIN7BQ9HAP6 207 aa12.82□□□□□ -0.36
VCX3A-201ENST00000381089 PLEKHA1Q9HB21 404 aa12.82□□□□□ -0.36
VCX3A-201ENST00000381089 LINC00312Q9Y6C7 94 aa12.82□□□□□ -0.36
VCX3A-201ENST00000381089 V9GYS6 101 aa12.82□□□□□ -0.36
VCX3A-201ENST00000381089 MEX3AA1L020 520 aaKnown RBP12.81□□□□□ -0.36
VCX3A-201ENST00000381089 ZNF737O75373 536 aa12.81□□□□□ -0.36
VCX3A-201ENST00000381089 MFGE8Q08431 387 aaPredicted RBP12.81□□□□□ -0.36
VCX3A-201ENST00000381089 RIPK1Q13546 671 aa12.81□□□□□ -0.36
VCX3A-201ENST00000381089 PTGES3Q15185 160 aaKnown RBP12.81□□□□□ -0.36
VCX3A-201ENST00000381089 ANGPTL5Q86XS5 388 aa12.81□□□□□ -0.36
VCX3A-201ENST00000381089 MYDGFQ969H8 173 aa12.81□□□□□ -0.36
VCX3A-201ENST00000381089 WWC2-AS2Q96NR7 200 aa12.81□□□□□ -0.36
VCX3A-201ENST00000381089 MBOAT4Q96T53 435 aa12.81□□□□□ -0.36
VCX3A-201ENST00000381089 CNN2Q99439 309 aaKnown RBP12.81□□□□□ -0.36
VCX3A-201ENST00000381089 TTTY10Q9BZA0 68 aa12.81□□□□□ -0.36
VCX3A-201ENST00000381089 SLC25A19Q9HC21 320 aa12.81□□□□□ -0.36
VCX3A-201ENST00000381089 ENOPH1Q9UHY7 261 aa12.81□□□□□ -0.36
VCX3A-201ENST00000381089 GLS2Q9UI32 602 aa12.81□□□□□ -0.36
VCX3A-201ENST00000381089 OR52A1Q9UKL2 312 aa12.81□□□□□ -0.36
VCX3A-201ENST00000381089 R4GMQ9 66 aa12.81□□□□□ -0.36
VCX3A-201ENST00000381089 COL7A1Q02388 2944 aa12.8□□□□□ -0.36
VCX3A-201ENST00000381089 FAM230AA0A1W2PPH8 454 aa12.8□□□□□ -0.36
VCX3A-201ENST00000381089 GABRR1P24046 479 aa12.8□□□□□ -0.36
VCX3A-201ENST00000381089 ZNF322Q6U7Q0 402 aaPredicted RBP12.8□□□□□ -0.36
VCX3A-201ENST00000381089 TRAPPC6BQ86SZ2 158 aa12.8□□□□□ -0.36
VCX3A-201ENST00000381089 ENTHD1Q8IYW4 607 aa12.8□□□□□ -0.36
VCX3A-201ENST00000381089 ELMOD2Q8IZ81 293 aa12.8□□□□□ -0.36
VCX3A-201ENST00000381089 OR51D1Q8NGF3 324 aa12.8□□□□□ -0.36
VCX3A-201ENST00000381089 OR14K1Q8NGZ2 314 aa12.8□□□□□ -0.36
VCX3A-201ENST00000381089 TRMT10AQ8TBZ6 339 aaKnown RBP12.8□□□□□ -0.36
VCX3A-201ENST00000381089 ZNF596Q8TC21 504 aa12.8□□□□□ -0.36
VCX3A-201ENST00000381089 MNTQ99583 582 aa12.8□□□□□ -0.36
VCX3A-201ENST00000381089 PRRG3Q9BZD7 231 aa12.8□□□□□ -0.36
VCX3A-201ENST00000381089 SMPD3Q9NY59 655 aaPredicted RBP12.8□□□□□ -0.36
VCX3A-201ENST00000381089 TVP23BQ9NYZ1 205 aa12.8□□□□□ -0.36
VCX3A-201ENST00000381089 ZMAT5Q9UDW3 170 aaKnown RBP12.8□□□□□ -0.36
VCX3A-201ENST00000381089 SNX5Q9Y5X3 404 aa12.8□□□□□ -0.36
VCX3A-201ENST00000381089 DSCAML1Q8TD84 2053 aa12.8□□□□□ -0.36
VCX3A-201ENST00000381089 TENM3Q9P273 2699 aa12.79□□□□□ -0.36
VCX3A-201ENST00000381089 WI2-2373I1.2A0A1W2PRP0 233 aa12.79□□□□□ -0.36
VCX3A-201ENST00000381089 A6NIN4 97 aa12.79□□□□□ -0.36
VCX3A-201ENST00000381089 ZAR1LA6NP61 321 aa12.79□□□□□ -0.36
VCX3A-201ENST00000381089 GATBO75879 557 aaKnown RBP12.79□□□□□ -0.36
VCX3A-201ENST00000381089 LPLP06858 475 aa12.79□□□□□ -0.36
VCX3A-201ENST00000381089 VSIG8P0DPA2 414 aa12.79□□□□□ -0.36
VCX3A-201ENST00000381089 JUNBP17275 347 aaPredicted RBP12.79□□□□□ -0.36
VCX3A-201ENST00000381089 GRK1Q15835 563 aa12.79□□□□□ -0.36
VCX3A-201ENST00000381089 ABCA11PQ4W5N1 156 aa12.79□□□□□ -0.36
VCX3A-201ENST00000381089 OR52W1Q6IF63 320 aa12.79□□□□□ -0.36
VCX3A-201ENST00000381089 RTN4RL2Q86UN3 420 aa12.79□□□□□ -0.36
VCX3A-201ENST00000381089 EGFL6Q8IUX8 553 aa12.79□□□□□ -0.36
VCX3A-201ENST00000381089 Q8IYB0 196 aa12.79□□□□□ -0.36
VCX3A-201ENST00000381089 PACRGLQ8N7B6 248 aa12.79□□□□□ -0.36
VCX3A-201ENST00000381089 EMG1Q92979 244 aaKnown RBP12.79□□□□□ -0.36
VCX3A-201ENST00000381089 CREB3L1Q96BA8 519 aa12.79□□□□□ -0.36
VCX3A-201ENST00000381089 B9D2Q9BPU9 175 aa12.79□□□□□ -0.36
VCX3A-201ENST00000381089 SLC25A33Q9BSK2 321 aa12.79□□□□□ -0.36
VCX3A-201ENST00000381089 VCXQ9H320 206 aa12.79□□□□□ -0.36
VCX3A-201ENST00000381089 DPM3Q9P2X0 92 aa12.79□□□□□ -0.36
VCX3A-201ENST00000381089 COPS3Q9UNS2 423 aa12.79□□□□□ -0.36
VCX3A-201ENST00000381089 RYR3Q15413 4870 aa12.79□□□□□ -0.36
VCX3A-201ENST00000381089 PRR32B1ATL7 298 aa12.78□□□□□ -0.36
VCX3A-201ENST00000381089 M0QZK8 103 aa12.78□□□□□ -0.36
VCX3A-201ENST00000381089 HAND1O96004 215 aa12.78□□□□□ -0.36
VCX3A-201ENST00000381089 CYB5AP00167 134 aa12.78□□□□□ -0.36
VCX3A-201ENST00000381089 SERPINA3P01011 423 aa12.78□□□□□ -0.36
VCX3A-201ENST00000381089 CEACAM3P40198 252 aa12.78□□□□□ -0.36
VCX3A-201ENST00000381089 FUT6P51993 359 aa12.78□□□□□ -0.36
VCX3A-201ENST00000381089 KRTAP10-11P60412 298 aa12.78□□□□□ -0.36
VCX3A-201ENST00000381089 CXCR4P61073 352 aa12.78□□□□□ -0.36
VCX3A-201ENST00000381089 EGFEM1PQ0D2K5 195 aa12.78□□□□□ -0.36
VCX3A-201ENST00000381089 TCTEX1D4Q5JR98 221 aa12.78□□□□□ -0.36
VCX3A-201ENST00000381089 TCF23Q7RTU1 214 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms