RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 RAB3DO95716 219 aa12.39□□□□□ -0.43
CLCN4-201ENST00000380829 NDUFB7P17568 137 aa12.39□□□□□ -0.43
CLCN4-201ENST00000380829 FOXG1P55316 489 aaPredicted RBP12.39□□□□□ -0.43
CLCN4-201ENST00000380829 SLC10A1Q14973 349 aa12.39□□□□□ -0.43
CLCN4-201ENST00000380829 C1QL2Q7Z5L3 287 aa12.39□□□□□ -0.43
CLCN4-201ENST00000380829 TRAPPC6BQ86SZ2 158 aa12.39□□□□□ -0.43
CLCN4-201ENST00000380829 FAM219AQ8IW50 185 aa12.39□□□□□ -0.43
CLCN4-201ENST00000380829 GVQW1Q8N7I0 195 aa12.39□□□□□ -0.43
CLCN4-201ENST00000380829 ZFP62Q8NB50 900 aaPredicted RBP12.39□□□□□ -0.43
CLCN4-201ENST00000380829 REEP6Q96HR9 211 aa12.39□□□□□ -0.43
CLCN4-201ENST00000380829 CHST5Q9GZS9 411 aa12.39□□□□□ -0.43
CLCN4-201ENST00000380829 LPAR5Q9H1C0 372 aa12.39□□□□□ -0.43
CLCN4-201ENST00000380829 TMEM100Q9NV29 134 aa12.39□□□□□ -0.43
CLCN4-201ENST00000380829 EEF1E1-BLOC1S5C9J1V9 151 aa12.38□□□□□ -0.43
CLCN4-201ENST00000380829 ZNHIT1O43257 154 aa12.38□□□□□ -0.43
CLCN4-201ENST00000380829 CDC14BO60729 498 aa12.38□□□□□ -0.43
CLCN4-201ENST00000380829 CRTAPO75718 401 aaPredicted RBP12.38□□□□□ -0.43
CLCN4-201ENST00000380829 AMY2AP04746 511 aa12.38□□□□□ -0.43
CLCN4-201ENST00000380829 TPT1P13693 172 aaKnown RBP12.38□□□□□ -0.43
CLCN4-201ENST00000380829 WT1P19544 449 aaPredicted RBP12.38□□□□□ -0.43
CLCN4-201ENST00000380829 PMP22Q01453 160 aa12.38□□□□□ -0.43
CLCN4-201ENST00000380829 PYY3Q5JQD4 70 aa12.38□□□□□ -0.43
CLCN4-201ENST00000380829 UNQ6494/PRO21346Q6UXR6 183 aa12.38□□□□□ -0.43
CLCN4-201ENST00000380829 SSX9Q7RTT3 188 aa12.38□□□□□ -0.43
CLCN4-201ENST00000380829 TMEM229BQ8NBD8 167 aa12.38□□□□□ -0.43
CLCN4-201ENST00000380829 MICU1Q9BPX6 476 aa12.38□□□□□ -0.43
CLCN4-201ENST00000380829 C20orf24Q9BUV8 137 aa12.38□□□□□ -0.43
CLCN4-201ENST00000380829 UFSP2Q9NUQ7 469 aa12.38□□□□□ -0.43
CLCN4-201ENST00000380829 TREM2Q9NZC2 230 aa12.38□□□□□ -0.43
CLCN4-201ENST00000380829 FBLN5Q9UBX5 448 aa12.38□□□□□ -0.43
CLCN4-201ENST00000380829 MYO7BQ6PIF6 2116 aa12.38□□□□□ -0.43
CLCN4-201ENST00000380829 ZNF736B4DX44 427 aaPredicted RBP12.38□□□□□ -0.43
CLCN4-201ENST00000380829 LRP3O75074 770 aa12.38□□□□□ -0.43
CLCN4-201ENST00000380829 YIF1AO95070 293 aa12.38□□□□□ -0.43
CLCN4-201ENST00000380829 FAM157CP0CG43 387 aa12.38□□□□□ -0.43
CLCN4-201ENST00000380829 FCGR2AP12318 317 aa12.38□□□□□ -0.43
CLCN4-201ENST00000380829 CD80P33681 288 aa12.38□□□□□ -0.43
CLCN4-201ENST00000380829 ID4P47928 161 aa12.38□□□□□ -0.43
CLCN4-201ENST00000380829 CCL11P51671 97 aa12.38□□□□□ -0.43
CLCN4-201ENST00000380829 RRADP55042 308 aa12.38□□□□□ -0.43
CLCN4-201ENST00000380829 RAB2AP61019 212 aa12.38□□□□□ -0.43
CLCN4-201ENST00000380829 ARF1P84077 181 aaKnown RBP12.38□□□□□ -0.43
CLCN4-201ENST00000380829 ZNF584Q8IVC4 421 aa12.38□□□□□ -0.43
CLCN4-201ENST00000380829 BAP18Q8IXM2 172 aa12.38□□□□□ -0.43
CLCN4-201ENST00000380829 ZNF565Q8N9K5 539 aa12.38□□□□□ -0.43
CLCN4-201ENST00000380829 ZNF383Q8NA42 475 aa12.38□□□□□ -0.43
CLCN4-201ENST00000380829 SEMA6DQ8NFY4 1073 aa12.38□□□□□ -0.43
CLCN4-201ENST00000380829 PP6455Q8WZ26 134 aa12.38□□□□□ -0.43
CLCN4-201ENST00000380829 DCUN1D4Q92564 292 aa12.38□□□□□ -0.43
CLCN4-201ENST00000380829 AKR1E2Q96JD6 320 aa12.38□□□□□ -0.43
CLCN4-201ENST00000380829 TMEM59Q9BXS4 323 aa12.38□□□□□ -0.43
CLCN4-201ENST00000380829 GPR173Q9NS66 373 aa12.38□□□□□ -0.43
CLCN4-201ENST00000380829 CXorf65A6NEN9 183 aa12.37□□□□□ -0.43
CLCN4-201ENST00000380829 SOCS1O15524 211 aa12.37□□□□□ -0.43
CLCN4-201ENST00000380829 PCBD1P61457 104 aa12.37□□□□□ -0.43
CLCN4-201ENST00000380829 DHRS11Q6UWP2 260 aa12.37□□□□□ -0.43
CLCN4-201ENST00000380829 ARRDC1Q8N5I2 433 aa12.37□□□□□ -0.43
CLCN4-201ENST00000380829 PNLDC1Q8NA58 520 aaKnown RBP12.37□□□□□ -0.43
CLCN4-201ENST00000380829 PRSS33Q8NF86 280 aa12.37□□□□□ -0.43
CLCN4-201ENST00000380829 KCNG3Q8TAE7 436 aa12.37□□□□□ -0.43
CLCN4-201ENST00000380829 HAS2Q92819 552 aa12.37□□□□□ -0.43
CLCN4-201ENST00000380829 SLAMF9Q96A28 289 aa12.37□□□□□ -0.43
CLCN4-201ENST00000380829 SPENQ96T58 3664 aaKnown RBP12.37□□□□□ -0.43
CLCN4-201ENST00000380829 PRR33A8MZF0 331 aa12.37□□□□□ -0.43
CLCN4-201ENST00000380829 RNASEK-C17orf49H0YIS7 233 aa12.37□□□□□ -0.43
CLCN4-201ENST00000380829 SNRNP70P08621 437 aaKnown RBP12.37□□□□□ -0.43
CLCN4-201ENST00000380829 MMP7P09237 267 aaPredicted RBP12.37□□□□□ -0.43
CLCN4-201ENST00000380829 NUBP1P53384 320 aa12.37□□□□□ -0.43
CLCN4-201ENST00000380829 NKPD1Q17RQ9 610 aa12.37□□□□□ -0.43
CLCN4-201ENST00000380829 PLAC9Q5JTB6 97 aa12.37□□□□□ -0.43
CLCN4-201ENST00000380829 ADAM5Q6NVV9 412 aa12.37□□□□□ -0.43
CLCN4-201ENST00000380829 IL34Q6ZMJ4 242 aa12.37□□□□□ -0.43
CLCN4-201ENST00000380829 Q6ZSR3 168 aa12.37□□□□□ -0.43
CLCN4-201ENST00000380829 CPEB3Q8NE35 698 aaKnown RBP12.37□□□□□ -0.43
CLCN4-201ENST00000380829 FDCSPQ8NFU4 85 aa12.37□□□□□ -0.43
CLCN4-201ENST00000380829 RRNAD1Q96FB5 475 aaKnown RBP12.37□□□□□ -0.43
CLCN4-201ENST00000380829 ALX4Q9H161 411 aaPredicted RBP12.37□□□□□ -0.43
CLCN4-201ENST00000380829 TMPRSS5Q9H3S3 457 aa12.37□□□□□ -0.43
CLCN4-201ENST00000380829 OR2S2Q9NQN1 319 aa12.37□□□□□ -0.43
CLCN4-201ENST00000380829 PARPBPQ9NWS1 579 aa12.37□□□□□ -0.43
CLCN4-201ENST00000380829 PRRC2CQ9Y520 2896 aaKnown RBP12.37□□□□□ -0.43
CLCN4-201ENST00000380829 ARID1AO14497 2285 aa12.36□□□□□ -0.43
CLCN4-201ENST00000380829 FAM186AA6NE01 2351 aa12.36□□□□□ -0.43
CLCN4-201ENST00000380829 AP4M1O00189 453 aa12.36□□□□□ -0.43
CLCN4-201ENST00000380829 SERPINA2P20848 420 aa12.36□□□□□ -0.43
CLCN4-201ENST00000380829 KRTAP27-1Q3LI81 207 aa12.36□□□□□ -0.43
CLCN4-201ENST00000380829 CD163Q86VB7 1156 aa12.36□□□□□ -0.43
CLCN4-201ENST00000380829 SLC30A7Q8NEW0 376 aa12.36□□□□□ -0.43
CLCN4-201ENST00000380829 CASTOR1Q8WTX7 329 aa12.36□□□□□ -0.43
CLCN4-201ENST00000380829 LINC00470Q9BZP3 86 aa12.36□□□□□ -0.43
CLCN4-201ENST00000380829 TOLLIPQ9H0E2 274 aa12.36□□□□□ -0.43
CLCN4-201ENST00000380829 SPRR3Q9UBC9 169 aa12.36□□□□□ -0.43
CLCN4-201ENST00000380829 FRYQ5TBA9 3013 aa12.36□□□□□ -0.43
CLCN4-201ENST00000380829 LAMA5O15230 3695 aa12.36□□□□□ -0.43
CLCN4-201ENST00000380829 ZNF587BE7ETH6 402 aa12.36□□□□□ -0.43
CLCN4-201ENST00000380829 MT-ND4LP03901 98 aa12.36□□□□□ -0.43
CLCN4-201ENST00000380829 MELTFP08582 738 aa12.36□□□□□ -0.43
CLCN4-201ENST00000380829 PAX6P26367 422 aa12.36□□□□□ -0.43
CLCN4-201ENST00000380829 TNFSF10P50591 281 aa12.36□□□□□ -0.43
CLCN4-201ENST00000380829 AWAT1Q58HT5 328 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms