RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 GEMIN2O14893 280 aaKnown RBP10.91□□□□□ -0.66
PRPF40B-202ENST00000380281 NUDT21O43809 227 aaKnown RBP10.91□□□□□ -0.66
PRPF40B-202ENST00000380281 PTBP3O95758 552 aaKnown RBP10.91□□□□□ -0.66
PRPF40B-202ENST00000380281 IGHG1P01857 330 aa10.91□□□□□ -0.66
PRPF40B-202ENST00000380281 HKR1P10072 659 aa10.91□□□□□ -0.66
PRPF40B-202ENST00000380281 KISS1Q15726 138 aa10.91□□□□□ -0.66
PRPF40B-202ENST00000380281 NKAIN1Q4KMZ8 207 aa10.91□□□□□ -0.66
PRPF40B-202ENST00000380281 TMEM268Q5VZI3 342 aa10.91□□□□□ -0.66
PRPF40B-202ENST00000380281 HSD17B11Q8NBQ5 300 aa10.91□□□□□ -0.66
PRPF40B-202ENST00000380281 ZNF2Q9BSG1 426 aaPredicted RBP10.91□□□□□ -0.66
PRPF40B-202ENST00000380281 OR10A2Q9H208 303 aa10.91□□□□□ -0.66
PRPF40B-202ENST00000380281 CBLN4Q9NTU7 201 aa10.91□□□□□ -0.66
PRPF40B-202ENST00000380281 PLEK2Q9NYT0 353 aa10.91□□□□□ -0.66
PRPF40B-202ENST00000380281 GOLT1BQ9Y3E0 138 aa10.91□□□□□ -0.66
PRPF40B-202ENST00000380281 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.9□□□□□ -0.66
PRPF40B-202ENST00000380281 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.9□□□□□ -0.66
PRPF40B-202ENST00000380281 TMEM127O75204 238 aa10.9□□□□□ -0.66
PRPF40B-202ENST00000380281 SCAF4O95104 1147 aaKnown RBP10.9□□□□□ -0.66
PRPF40B-202ENST00000380281 MMP7P09237 267 aaPredicted RBP10.9□□□□□ -0.66
PRPF40B-202ENST00000380281 GZMBP10144 247 aa10.9□□□□□ -0.66
PRPF40B-202ENST00000380281 FSTP19883 344 aa10.9□□□□□ -0.66
PRPF40B-202ENST00000380281 OMGP23515 440 aa10.9□□□□□ -0.66
PRPF40B-202ENST00000380281 PPP1CCP36873 323 aaKnown RBP10.9□□□□□ -0.66
PRPF40B-202ENST00000380281 AFF3P51826 1226 aaKnown RBP10.9□□□□□ -0.66
PRPF40B-202ENST00000380281 SUPT4H1P63272 117 aaKnown RBP10.9□□□□□ -0.66
PRPF40B-202ENST00000380281 PPA1Q15181 289 aa10.9□□□□□ -0.66
PRPF40B-202ENST00000380281 HIST2H3PS2Q5TEC6 136 aa10.9□□□□□ -0.66
PRPF40B-202ENST00000380281 C9orf135Q5VTT2 229 aa10.9□□□□□ -0.66
PRPF40B-202ENST00000380281 RAET1LQ5VY80 246 aa10.9□□□□□ -0.66
PRPF40B-202ENST00000380281 CPEB2Q7Z5Q1 589 aaKnown RBP10.9□□□□□ -0.66
PRPF40B-202ENST00000380281 SLC25A45Q8N413 288 aa10.9□□□□□ -0.66
PRPF40B-202ENST00000380281 FAAP24Q9BTP7 215 aa10.9□□□□□ -0.66
PRPF40B-202ENST00000380281 TWSG1Q9GZX9 223 aa10.9□□□□□ -0.66
PRPF40B-202ENST00000380281 B3GAT1Q9P2W7 334 aa10.9□□□□□ -0.66
PRPF40B-202ENST00000380281 SPTBN2O15020 2390 aa10.9□□□□□ -0.66
PRPF40B-202ENST00000380281 H0YL77 283 aa10.9□□□□□ -0.66
PRPF40B-202ENST00000380281 HSPB6O14558 160 aa10.9□□□□□ -0.66
PRPF40B-202ENST00000380281 CST4P01036 141 aa10.9□□□□□ -0.66
PRPF40B-202ENST00000380281 CD27P26842 260 aa10.9□□□□□ -0.66
PRPF40B-202ENST00000380281 FCGR2CP31995 323 aa10.9□□□□□ -0.66
PRPF40B-202ENST00000380281 RBMXP38159 391 aaKnown RBP10.9□□□□□ -0.66
PRPF40B-202ENST00000380281 TMEM33P57088 247 aa10.9□□□□□ -0.66
PRPF40B-202ENST00000380281 PHF19Q5T6S3 580 aa10.9□□□□□ -0.66
PRPF40B-202ENST00000380281 RPUSD3Q6P087 351 aaKnown RBP10.9□□□□□ -0.66
PRPF40B-202ENST00000380281 HOGA1Q86XE5 327 aa10.9□□□□□ -0.66
PRPF40B-202ENST00000380281 PRR18Q8N4B5 295 aa10.9□□□□□ -0.66
PRPF40B-202ENST00000380281 SUMF2Q8NBJ7 301 aa10.9□□□□□ -0.66
PRPF40B-202ENST00000380281 KCNG3Q8TAE7 436 aa10.9□□□□□ -0.66
PRPF40B-202ENST00000380281 RAB39BQ96DA2 213 aa10.9□□□□□ -0.66
PRPF40B-202ENST00000380281 PIGLQ9Y2B2 252 aa10.9□□□□□ -0.66
PRPF40B-202ENST00000380281 PRR14LQ5THK1 2151 aa10.9□□□□□ -0.67
PRPF40B-202ENST00000380281 LILRA5A6NI73 299 aa10.89□□□□□ -0.67
PRPF40B-202ENST00000380281 C9J4A7 227 aa10.89□□□□□ -0.67
PRPF40B-202ENST00000380281 BPNT1O95861 308 aa10.89□□□□□ -0.67
PRPF40B-202ENST00000380281 IL18BPO95998 194 aa10.89□□□□□ -0.67
PRPF40B-202ENST00000380281 JMJD7P0C870 316 aa10.89□□□□□ -0.67
PRPF40B-202ENST00000380281 RPL12P30050 165 aaKnown RBP10.89□□□□□ -0.67
PRPF40B-202ENST00000380281 RAB1AP62820 205 aa10.89□□□□□ -0.67
PRPF40B-202ENST00000380281 EIF5AP63241 154 aaKnown RBP10.89□□□□□ -0.67
PRPF40B-202ENST00000380281 SPEM2Q0P670 501 aa10.89□□□□□ -0.67
PRPF40B-202ENST00000380281 SMAD4Q13485 552 aaKnown RBP10.89□□□□□ -0.67
PRPF40B-202ENST00000380281 MEX3BQ6ZN04 569 aaKnown RBP10.89□□□□□ -0.67
PRPF40B-202ENST00000380281 THNSL2Q86YJ6 484 aa10.89□□□□□ -0.67
PRPF40B-202ENST00000380281 ZDHHC22Q8N966 263 aa10.89□□□□□ -0.67
PRPF40B-202ENST00000380281 ZNF385AQ96PM9 386 aaKnown RBP10.89□□□□□ -0.67
PRPF40B-202ENST00000380281 DHRS7CA6NNS2 312 aa10.89□□□□□ -0.67
PRPF40B-202ENST00000380281 SCRG1O75711 98 aa10.89□□□□□ -0.67
PRPF40B-202ENST00000380281 PGA4P0DJD7 388 aa10.89□□□□□ -0.67
PRPF40B-202ENST00000380281 PGA5P0DJD9 388 aa10.89□□□□□ -0.67
PRPF40B-202ENST00000380281 PAX1P15863 534 aa10.89□□□□□ -0.67
PRPF40B-202ENST00000380281 CCNOP22674 350 aa10.89□□□□□ -0.67
PRPF40B-202ENST00000380281 CHATP28329 748 aa10.89□□□□□ -0.67
PRPF40B-202ENST00000380281 OR5L1Q8NGL2 311 aa10.89□□□□□ -0.67
PRPF40B-202ENST00000380281 ERGIC1Q969X5 290 aa10.89□□□□□ -0.67
PRPF40B-202ENST00000380281 MRPL24Q96A35 216 aaKnown RBP10.89□□□□□ -0.67
PRPF40B-202ENST00000380281 URM1Q9BTM9 101 aaKnown RBP10.89□□□□□ -0.67
PRPF40B-202ENST00000380281 TMEM208Q9BTX3 173 aa10.89□□□□□ -0.67
PRPF40B-202ENST00000380281 DEFB126Q9BYW3 111 aa10.89□□□□□ -0.67
PRPF40B-202ENST00000380281 SLC25A31Q9H0C2 315 aa10.89□□□□□ -0.67
PRPF40B-202ENST00000380281 SH3BGRL3Q9H299 93 aa10.89□□□□□ -0.67
PRPF40B-202ENST00000380281 GPR132Q9UNW8 380 aa10.89□□□□□ -0.67
PRPF40B-202ENST00000380281 DOCK10Q96BY6 2186 aa10.89□□□□□ -0.67
PRPF40B-202ENST00000380281 BLACEA4D250 179 aa10.89□□□□□ -0.67
PRPF40B-202ENST00000380281 RPL36A-HNRNPH2H7BZ11 118 aa10.89□□□□□ -0.67
PRPF40B-202ENST00000380281 K7EPK0 472 aa10.89□□□□□ -0.67
PRPF40B-202ENST00000380281 PIAS2O75928 621 aa10.89□□□□□ -0.67
PRPF40B-202ENST00000380281 ZNF17P17021 662 aa10.89□□□□□ -0.67
PRPF40B-202ENST00000380281 FGF7P21781 194 aa10.89□□□□□ -0.67
PRPF40B-202ENST00000380281 RGS19P49795 217 aa10.89□□□□□ -0.67
PRPF40B-202ENST00000380281 UBE2KP61086 200 aa10.89□□□□□ -0.67
PRPF40B-202ENST00000380281 HNF4GQ14541 408 aa10.89□□□□□ -0.67
PRPF40B-202ENST00000380281 PCK2Q16822 640 aa10.89□□□□□ -0.67
PRPF40B-202ENST00000380281 OGFOD3Q6PK18 319 aa10.89□□□□□ -0.67
PRPF40B-202ENST00000380281 GPR137CQ8N3F9 429 aa10.89□□□□□ -0.67
PRPF40B-202ENST00000380281 FAM71E2Q8N5Q1 922 aa10.89□□□□□ -0.67
PRPF40B-202ENST00000380281 RAB24Q969Q5 203 aa10.89□□□□□ -0.67
PRPF40B-202ENST00000380281 RTBDNQ9BSG5 229 aaPredicted RBP10.89□□□□□ -0.67
PRPF40B-202ENST00000380281 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.89□□□□□ -0.67
PRPF40B-202ENST00000380281 C14orf166Q9Y224 244 aaKnown RBP10.89□□□□□ -0.67
PRPF40B-202ENST00000380281 TMEM14DPA8MWL7 114 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms