RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 CDK5R1Q15078 307 aa12.55□□□□□ -0.4
RAB4B-202ENST00000378307 TCF23Q7RTU1 214 aa12.55□□□□□ -0.4
RAB4B-202ENST00000378307 LDLRAD3Q86YD5 345 aa12.55□□□□□ -0.4
RAB4B-202ENST00000378307 TPRX1Q8N7U7 411 aa12.55□□□□□ -0.4
RAB4B-202ENST00000378307 ZNF485Q8NCK3 441 aa12.55□□□□□ -0.4
RAB4B-202ENST00000378307 OR51A2Q8NGJ7 313 aa12.55□□□□□ -0.4
RAB4B-202ENST00000378307 ORAI1Q96D31 301 aa12.55□□□□□ -0.4
RAB4B-202ENST00000378307 NKX3-1Q99801 234 aaPredicted RBP12.55□□□□□ -0.4
RAB4B-202ENST00000378307 CHST6Q9GZX3 395 aa12.55□□□□□ -0.4
RAB4B-202ENST00000378307 FAM234AQ9H0X4 552 aa12.55□□□□□ -0.4
RAB4B-202ENST00000378307 C8orf4Q9NR00 106 aa12.55□□□□□ -0.4
RAB4B-202ENST00000378307 ZNRD1Q9P1U0 126 aa12.55□□□□□ -0.4
RAB4B-202ENST00000378307 DHDHQ9UQ10 334 aa12.55□□□□□ -0.4
RAB4B-202ENST00000378307 CMYA5Q8N3K9 4069 aa12.54□□□□□ -0.4
RAB4B-202ENST00000378307 OGG1O15527 345 aa12.54□□□□□ -0.4
RAB4B-202ENST00000378307 XPNPEP2O43895 674 aa12.54□□□□□ -0.4
RAB4B-202ENST00000378307 KDM4BO94953 1096 aa12.54□□□□□ -0.4
RAB4B-202ENST00000378307 PRKACAP17612 351 aa12.54□□□□□ -0.4
RAB4B-202ENST00000378307 ZP1P60852 638 aa12.54□□□□□ -0.4
RAB4B-202ENST00000378307 GUCA2AQ02747 115 aa12.54□□□□□ -0.4
RAB4B-202ENST00000378307 IL18R1Q13478 541 aa12.54□□□□□ -0.4
RAB4B-202ENST00000378307 BLMHQ13867 455 aa12.54□□□□□ -0.4
RAB4B-202ENST00000378307 ZNF146Q15072 292 aa12.54□□□□□ -0.4
RAB4B-202ENST00000378307 TAF9Q16594 264 aa12.54□□□□□ -0.4
RAB4B-202ENST00000378307 ZNF782Q6ZMW2 699 aaPredicted RBP12.54□□□□□ -0.4
RAB4B-202ENST00000378307 SERPINA12Q8IW75 414 aa12.54□□□□□ -0.4
RAB4B-202ENST00000378307 TMEM86BQ8N661 226 aa12.54□□□□□ -0.4
RAB4B-202ENST00000378307 OR4S1Q8NGB4 309 aa12.54□□□□□ -0.4
RAB4B-202ENST00000378307 OR5D13Q8NGL4 314 aa12.54□□□□□ -0.4
RAB4B-202ENST00000378307 OR13C5Q8NGS8 318 aa12.54□□□□□ -0.4
RAB4B-202ENST00000378307 FBLIM1Q8WUP2 373 aa12.54□□□□□ -0.4
RAB4B-202ENST00000378307 TSEN15Q8WW01 171 aaKnown RBP12.54□□□□□ -0.4
RAB4B-202ENST00000378307 SSMEM1Q8WWF3 244 aa12.54□□□□□ -0.4
RAB4B-202ENST00000378307 NRG4Q8WWG1 115 aa12.54□□□□□ -0.4
RAB4B-202ENST00000378307 TMEM80Q96HE8 168 aa12.54□□□□□ -0.4
RAB4B-202ENST00000378307 SNX22Q96L94 193 aa12.54□□□□□ -0.4
RAB4B-202ENST00000378307 MYCBPQ99417 103 aaPredicted RBP12.54□□□□□ -0.4
RAB4B-202ENST00000378307 COMMD4Q9H0A8 199 aa12.54□□□□□ -0.4
RAB4B-202ENST00000378307 HMG20AQ9NP66 347 aa12.54□□□□□ -0.4
RAB4B-202ENST00000378307 BABAM2Q9NXR7 383 aa12.54□□□□□ -0.4
RAB4B-202ENST00000378307 C1RLQ9NZP8 487 aa12.54□□□□□ -0.4
RAB4B-202ENST00000378307 POMT1Q9Y6A1 747 aa12.54□□□□□ -0.4
RAB4B-202ENST00000378307 C17orf98A8MV24 154 aa12.53□□□□□ -0.4
RAB4B-202ENST00000378307 SULT1B1O43704 296 aa12.53□□□□□ -0.4
RAB4B-202ENST00000378307 ALX3O95076 343 aa12.53□□□□□ -0.4
RAB4B-202ENST00000378307 OCM2P0CE71 109 aa12.53□□□□□ -0.4
RAB4B-202ENST00000378307 OCMP0CE72 109 aaPredicted RBP12.53□□□□□ -0.4
RAB4B-202ENST00000378307 EEF1B2P24534 225 aaKnown RBP12.53□□□□□ -0.4
RAB4B-202ENST00000378307 EDDM3BP56851 147 aa12.53□□□□□ -0.4
RAB4B-202ENST00000378307 ST3GAL4Q11206 333 aa12.53□□□□□ -0.4
RAB4B-202ENST00000378307 KISS1Q15726 138 aa12.53□□□□□ -0.4
RAB4B-202ENST00000378307 CCDC58Q4VC31 144 aa12.53□□□□□ -0.4
RAB4B-202ENST00000378307 NCR3LG1Q68D85 454 aa12.53□□□□□ -0.4
RAB4B-202ENST00000378307 ZNF529Q6P280 563 aa12.53□□□□□ -0.4
RAB4B-202ENST00000378307 RPL22L1Q6P5R6 122 aaKnown RBP12.53□□□□□ -0.4
RAB4B-202ENST00000378307 Q8IYB0 196 aa12.53□□□□□ -0.4
RAB4B-202ENST00000378307 OR8H2Q8N162 312 aa12.53□□□□□ -0.4
RAB4B-202ENST00000378307 SETD9Q8NE22 299 aa12.53□□□□□ -0.4
RAB4B-202ENST00000378307 OR5D14Q8NGL3 314 aa12.53□□□□□ -0.4
RAB4B-202ENST00000378307 TBC1D15Q8TC07 691 aa12.53□□□□□ -0.4
RAB4B-202ENST00000378307 ZNF747Q9BV97 191 aa12.53□□□□□ -0.4
RAB4B-202ENST00000378307 SEBOXQ9HB31 216 aaPredicted RBP12.53□□□□□ -0.4
RAB4B-202ENST00000378307 TAS2R4Q9NYW5 299 aa12.53□□□□□ -0.4
RAB4B-202ENST00000378307 GSTK1Q9Y2Q3 226 aa12.53□□□□□ -0.4
RAB4B-202ENST00000378307 EXOSC1Q9Y3B2 195 aaKnown RBP12.53□□□□□ -0.4
RAB4B-202ENST00000378307 FAM96BQ9Y3D0 163 aa12.53□□□□□ -0.4
RAB4B-202ENST00000378307 HSPE1-MOB4S4R3N1 261 aa12.53□□□□□ -0.4
RAB4B-202ENST00000378307 SIRPB1O00241 398 aa12.52□□□□□ -0.41
RAB4B-202ENST00000378307 GPR137BO60478 399 aa12.52□□□□□ -0.41
RAB4B-202ENST00000378307 OR2H2O95918 312 aa12.52□□□□□ -0.41
RAB4B-202ENST00000378307 CYB5AP00167 134 aa12.52□□□□□ -0.41
RAB4B-202ENST00000378307 HCKP08631 526 aa12.52□□□□□ -0.41
RAB4B-202ENST00000378307 FBP1P09467 338 aa12.52□□□□□ -0.41
RAB4B-202ENST00000378307 GABRR1P24046 479 aa12.52□□□□□ -0.41
RAB4B-202ENST00000378307 C21orf33P30042 268 aaPredicted RBP12.52□□□□□ -0.41
RAB4B-202ENST00000378307 OR3A1P47881 315 aa12.52□□□□□ -0.41
RAB4B-202ENST00000378307 BMXP51813 675 aa12.52□□□□□ -0.41
RAB4B-202ENST00000378307 EDDM3AQ14507 147 aa12.52□□□□□ -0.41
RAB4B-202ENST00000378307 Q6P435 159 aa12.52□□□□□ -0.41
RAB4B-202ENST00000378307 TMPRSS11AQ6ZMR5 421 aa12.52□□□□□ -0.41
RAB4B-202ENST00000378307 C8orf59Q8N0T1 100 aaPredicted RBP12.52□□□□□ -0.41
RAB4B-202ENST00000378307 ZFP41Q8N8Y5 198 aa12.52□□□□□ -0.41
RAB4B-202ENST00000378307 TFAP2CQ92754 450 aa12.52□□□□□ -0.41
RAB4B-202ENST00000378307 DCLRE1BQ9H816 532 aa12.52□□□□□ -0.41
RAB4B-202ENST00000378307 SF3B6Q9Y3B4 125 aaKnown RBP12.52□□□□□ -0.41
RAB4B-202ENST00000378307 MYL12AP19105 171 aa12.51□□□□□ -0.41
RAB4B-202ENST00000378307 COX7A1P24310 79 aa12.51□□□□□ -0.41
RAB4B-202ENST00000378307 RPS11P62280 158 aaKnown RBP eCLIP12.51□□□□□ -0.41
RAB4B-202ENST00000378307 ACSM1Q08AH1 577 aa12.51□□□□□ -0.41
RAB4B-202ENST00000378307 GRK1Q15835 563 aa12.51□□□□□ -0.41
RAB4B-202ENST00000378307 LDLRAD2Q5SZI1 272 aa12.51□□□□□ -0.41
RAB4B-202ENST00000378307 DMKNQ6E0U4 476 aaPredicted RBP12.51□□□□□ -0.41
RAB4B-202ENST00000378307 GDPD3Q7L5L3 318 aa12.51□□□□□ -0.41
RAB4B-202ENST00000378307 LHFPL4Q7Z7J7 247 aa12.51□□□□□ -0.41
RAB4B-202ENST00000378307 DYNAPQ8N1N2 210 aa12.51□□□□□ -0.41
RAB4B-202ENST00000378307 BPIFB6Q8NFQ5 453 aa12.51□□□□□ -0.41
RAB4B-202ENST00000378307 HAVCR2Q8TDQ0 301 aa12.51□□□□□ -0.41
RAB4B-202ENST00000378307 GPR148Q8TDV2 347 aa12.51□□□□□ -0.41
RAB4B-202ENST00000378307 DYRK2Q92630 601 aa12.51□□□□□ -0.41
RAB4B-202ENST00000378307 NEK6Q9HC98 313 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms