RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 RCL1Q9Y2P8 373 aaKnown RBP11.57□□□□□ -0.56
NPHP4-203ENST00000378169 TRBV5-5A0A0J9YX44 114 aa11.57□□□□□ -0.56
NPHP4-203ENST00000378169 TRAF3IP2O43734 574 aaPredicted RBP11.57□□□□□ -0.56
NPHP4-203ENST00000378169 CST2P09228 141 aa11.57□□□□□ -0.56
NPHP4-203ENST00000378169 CD37P11049 281 aa11.57□□□□□ -0.56
NPHP4-203ENST00000378169 CLDN23Q96B33 292 aa11.57□□□□□ -0.56
NPHP4-203ENST00000378169 ANGPTL4Q9BY76 406 aa11.57□□□□□ -0.56
NPHP4-203ENST00000378169 TTTY12Q9BZ98 90 aa11.57□□□□□ -0.56
NPHP4-203ENST00000378169 CHST5Q9GZS9 411 aa11.57□□□□□ -0.56
NPHP4-203ENST00000378169 OPA3Q9H6K4 179 aa11.57□□□□□ -0.56
NPHP4-203ENST00000378169 LIN7CQ9NUP9 197 aaKnown RBP11.57□□□□□ -0.56
NPHP4-203ENST00000378169 KCNK7Q9Y2U2 307 aa11.57□□□□□ -0.56
NPHP4-203ENST00000378169 LHFPL6Q9Y693 200 aa11.57□□□□□ -0.56
NPHP4-203ENST00000378169 IGKV3D-11A0A0A0MRZ8 115 aa11.57□□□□□ -0.56
NPHP4-203ENST00000378169 LRP5LA4QPB2 252 aa11.57□□□□□ -0.56
NPHP4-203ENST00000378169 ZNF891A8MT65 544 aaPredicted RBP11.57□□□□□ -0.56
NPHP4-203ENST00000378169 PCOLCEQ15113 449 aa11.57□□□□□ -0.56
NPHP4-203ENST00000378169 LGALSLQ3ZCW2 172 aaPredicted RBP11.57□□□□□ -0.56
NPHP4-203ENST00000378169 SLC38A6Q8IZM9 456 aa11.57□□□□□ -0.56
NPHP4-203ENST00000378169 C9orf62Q8N4C0 152 aa11.57□□□□□ -0.56
NPHP4-203ENST00000378169 TMEM251Q8N6I4 163 aa11.57□□□□□ -0.56
NPHP4-203ENST00000378169 SDHCQ99643 169 aaPredicted RBP11.57□□□□□ -0.56
NPHP4-203ENST00000378169 FNDC1Q4ZHG4 1894 aaPredicted RBP11.57□□□□□ -0.56
NPHP4-203ENST00000378169 TP53BP1Q12888 1972 aaPredicted RBP11.56□□□□□ -0.56
NPHP4-203ENST00000378169 ATP1A1-AS1Q5TC04 95 aa11.56□□□□□ -0.56
NPHP4-203ENST00000378169 FAM27BQ5VT28 67 aa11.56□□□□□ -0.56
NPHP4-203ENST00000378169 RBMS3Q6XE24 437 aaKnown RBP11.56□□□□□ -0.56
NPHP4-203ENST00000378169 MS4A3Q96HJ5 214 aa11.56□□□□□ -0.56
NPHP4-203ENST00000378169 RTN4RQ9BZR6 473 aa11.56□□□□□ -0.56
NPHP4-203ENST00000378169 RPH3ALQ9UNE2 315 aa11.56□□□□□ -0.56
NPHP4-203ENST00000378169 IGHV3-43A0A0B4J1X8 118 aa11.56□□□□□ -0.56
NPHP4-203ENST00000378169 NKX2-8O15522 239 aa11.56□□□□□ -0.56
NPHP4-203ENST00000378169 HEXAP06865 529 aa11.56□□□□□ -0.56
NPHP4-203ENST00000378169 SP1P08047 785 aa11.56□□□□□ -0.56
NPHP4-203ENST00000378169 IGHV3-43DP0DP04 118 aa11.56□□□□□ -0.56
NPHP4-203ENST00000378169 CPN1P15169 458 aa11.56□□□□□ -0.56
NPHP4-203ENST00000378169 CEACAM6P40199 344 aa11.56□□□□□ -0.56
NPHP4-203ENST00000378169 PSG4Q00888 419 aa11.56□□□□□ -0.56
NPHP4-203ENST00000378169 PDZK1IP1Q13113 114 aa11.56□□□□□ -0.56
NPHP4-203ENST00000378169 ZNF362Q5T0B9 420 aaPredicted RBP11.56□□□□□ -0.56
NPHP4-203ENST00000378169 C17orf78Q8N4C9 275 aa11.56□□□□□ -0.56
NPHP4-203ENST00000378169 MALSU1Q96EH3 234 aa11.56□□□□□ -0.56
NPHP4-203ENST00000378169 C14orf79Q96F83 325 aa11.56□□□□□ -0.56
NPHP4-203ENST00000378169 PFDN5Q99471 154 aa11.56□□□□□ -0.56
NPHP4-203ENST00000378169 C7orf66A4D0T2 115 aa11.56□□□□□ -0.56
NPHP4-203ENST00000378169 SCAF4O95104 1147 aaKnown RBP11.56□□□□□ -0.56
NPHP4-203ENST00000378169 S100A12P80511 92 aa11.56□□□□□ -0.56
NPHP4-203ENST00000378169 ADIRFQ15847 76 aa11.56□□□□□ -0.56
NPHP4-203ENST00000378169 CDCP2Q5VXM1 449 aa11.56□□□□□ -0.56
NPHP4-203ENST00000378169 ADAD2Q8NCV1 583 aaKnown RBP11.56□□□□□ -0.56
NPHP4-203ENST00000378169 OR10Z1Q8NGY1 313 aa11.56□□□□□ -0.56
NPHP4-203ENST00000378169 OR6S1Q8NH40 331 aa11.56□□□□□ -0.56
NPHP4-203ENST00000378169 ZNF519Q8TB69 540 aa11.56□□□□□ -0.56
NPHP4-203ENST00000378169 NKX6-2Q9C056 277 aaPredicted RBP11.56□□□□□ -0.56
NPHP4-203ENST00000378169 GHITMQ9H3K2 345 aa11.56□□□□□ -0.56
NPHP4-203ENST00000378169 RAB18Q9NP72 206 aa11.56□□□□□ -0.56
NPHP4-203ENST00000378169 C17orf112F2Z3M2 114 aa11.56□□□□□ -0.56
NPHP4-203ENST00000378169 AGFG2O95081 481 aa11.56□□□□□ -0.56
NPHP4-203ENST00000378169 CRYABP02511 175 aaKnown RBP11.56□□□□□ -0.56
NPHP4-203ENST00000378169 COX6A1P12074 109 aa11.56□□□□□ -0.56
NPHP4-203ENST00000378169 TAGLN2P37802 199 aaKnown RBP11.56□□□□□ -0.56
NPHP4-203ENST00000378169 HES1Q14469 280 aa11.56□□□□□ -0.56
NPHP4-203ENST00000378169 ZBTB44Q8NCP5 570 aa11.56□□□□□ -0.56
NPHP4-203ENST00000378169 OR13G1Q8NGZ3 307 aa11.56□□□□□ -0.56
NPHP4-203ENST00000378169 KLK13Q9UKR3 277 aa11.56□□□□□ -0.56
NPHP4-203ENST00000378169 PTPRDP23468 1912 aa11.55□□□□□ -0.56
NPHP4-203ENST00000378169 ZNF407Q9C0G0 2248 aa11.55□□□□□ -0.56
NPHP4-203ENST00000378169 OR8U8P0C7N1 319 aa11.55□□□□□ -0.56
NPHP4-203ENST00000378169 EIF2S3P41091 472 aaKnown RBP11.55□□□□□ -0.56
NPHP4-203ENST00000378169 AKR1C3P42330 323 aa11.55□□□□□ -0.56
NPHP4-203ENST00000378169 RPUSD3Q6P087 351 aaKnown RBP11.55□□□□□ -0.56
NPHP4-203ENST00000378169 MRPL41Q8IXM3 137 aaKnown RBP11.55□□□□□ -0.56
NPHP4-203ENST00000378169 ZFP82Q8N141 532 aa11.55□□□□□ -0.56
NPHP4-203ENST00000378169 OR10P1Q8NGE3 313 aa11.55□□□□□ -0.56
NPHP4-203ENST00000378169 RPS4Y2Q8TD47 263 aa11.55□□□□□ -0.56
NPHP4-203ENST00000378169 ZNF426Q9BUY5 554 aa11.55□□□□□ -0.56
NPHP4-203ENST00000378169 PSENENQ9NZ42 101 aa11.55□□□□□ -0.56
NPHP4-203ENST00000378169 TAAR3PQ9P1P4 343 aa11.55□□□□□ -0.56
NPHP4-203ENST00000378169 LNP1A1A4G5 178 aa11.55□□□□□ -0.56
NPHP4-203ENST00000378169 CLEC18AA5D8T8 446 aa11.55□□□□□ -0.56
NPHP4-203ENST00000378169 ADAM20O43506 726 aa11.55□□□□□ -0.56
NPHP4-203ENST00000378169 CLEC18CQ8NCF0 446 aa11.55□□□□□ -0.56
NPHP4-203ENST00000378169 LHX4Q969G2 390 aa11.55□□□□□ -0.56
NPHP4-203ENST00000378169 ZNF488Q96MN9 340 aa11.55□□□□□ -0.56
NPHP4-203ENST00000378169 IGKV1D-43A0A0B4J1Z2 117 aa11.55□□□□□ -0.56
NPHP4-203ENST00000378169 TMEM30CPA0ZSE6 113 aa11.55□□□□□ -0.56
NPHP4-203ENST00000378169 OR3A1P47881 315 aa11.55□□□□□ -0.56
NPHP4-203ENST00000378169 ZNF92Q03936 586 aa11.54□□□□□ -0.56
NPHP4-203ENST00000378169 C19orf57Q0VDD7 668 aa11.54□□□□□ -0.56
NPHP4-203ENST00000378169 SKA3Q8IX90 412 aa11.54□□□□□ -0.56
NPHP4-203ENST00000378169 MRGPRDQ8TDS7 321 aa11.54□□□□□ -0.56
NPHP4-203ENST00000378169 ERGIC1Q969X5 290 aa11.54□□□□□ -0.56
NPHP4-203ENST00000378169 GNPNAT1Q96EK6 184 aaPredicted RBP11.54□□□□□ -0.56
NPHP4-203ENST00000378169 MRPS24Q96EL2 167 aaKnown RBP11.54□□□□□ -0.56
NPHP4-203ENST00000378169 NAA60Q9H7X0 242 aa11.54□□□□□ -0.56
NPHP4-203ENST00000378169 TREM2Q9NZC2 230 aa11.54□□□□□ -0.56
NPHP4-203ENST00000378169 OR5B21A6NL26 309 aa11.54□□□□□ -0.56
NPHP4-203ENST00000378169 UMAD1C9J7I0 102 aa11.54□□□□□ -0.56
NPHP4-203ENST00000378169 KCNAB3O43448 404 aa11.54□□□□□ -0.56
NPHP4-203ENST00000378169 CD1AP06126 327 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms