RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 MYLKQ15746 1914 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 ABCD4O14678 606 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 HYAL3O43820 417 aaPredicted RBP7.43□□□□□ -1.22
VPS36-201ENST00000378060 OR7C2O60412 319 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 MBPP02686 304 aaPredicted RBP7.43□□□□□ -1.22
VPS36-201ENST00000378060 OPN1MWP04001 364 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 OR5AC1P0C628 307 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 OPN1MW2P0DN77 364 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 OPN1MW3P0DN78 364 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 ERGP11308 486 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 LIMK1P53667 647 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 MRGPREQ86SM8 312 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 OR10G3Q8NGC4 313 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 OR6S1Q8NH40 331 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 FAM210BQ96KR6 192 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 PRSS27Q9BQR3 290 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 SARGQ9BW04 601 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 PECRQ9BY49 303 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 UCK1Q9HA47 277 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 SPTA1P02549 2419 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 SCN3AQ9NY46 2000 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 DNAJC13O75165 2243 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 ZIC2O95409 532 aaPredicted RBP7.43□□□□□ -1.22
VPS36-201ENST00000378060 CT45A10P0DMU9 189 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 ACAA2P42765 397 aaKnown RBP7.43□□□□□ -1.22
VPS36-201ENST00000378060 TPPP2P59282 170 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 HLA-DRB3P79483 266 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 IFITM2Q01629 132 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 SKP2Q13309 424 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 IGFBP7Q16270 282 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 DMRTC1Q5HYR2 192 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 CPEB3Q8NE35 698 aaKnown RBP7.43□□□□□ -1.22
VPS36-201ENST00000378060 RNF133Q8WVZ7 376 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 H1FXQ92522 213 aaKnown RBP7.43□□□□□ -1.22
VPS36-201ENST00000378060 BOD1Q96IK1 185 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 DECR2Q9NUI1 292 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 TNFSF18Q9UNG2 199 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 MAP1LC3B2A6NCE7 125 aa7.42□□□□□ -1.22
VPS36-201ENST00000378060 RBFOX3A6NFN3 312 aa7.42□□□□□ -1.22
VPS36-201ENST00000378060 B4DEV8 164 aa7.42□□□□□ -1.22
VPS36-201ENST00000378060 MFNGO00587 321 aa7.42□□□□□ -1.22
VPS36-201ENST00000378060 ADAM20O43506 726 aa7.42□□□□□ -1.22
VPS36-201ENST00000378060 CDS2O95674 445 aa7.42□□□□□ -1.22
VPS36-201ENST00000378060 NDUFB7P17568 137 aa7.42□□□□□ -1.22
VPS36-201ENST00000378060 VDAC1P21796 283 aa7.42□□□□□ -1.22
VPS36-201ENST00000378060 MDH2P40926 338 aaKnown RBP7.42□□□□□ -1.22
VPS36-201ENST00000378060 RFC3P40938 356 aa7.42□□□□□ -1.22
VPS36-201ENST00000378060 BPIFB3P59826 476 aa7.42□□□□□ -1.22
VPS36-201ENST00000378060 TUSC1Q2TAM9 212 aa7.42□□□□□ -1.22
VPS36-201ENST00000378060 OVCH2Q7RTZ1 564 aa7.42□□□□□ -1.22
VPS36-201ENST00000378060 ANKRD37Q7Z713 158 aa7.42□□□□□ -1.22
VPS36-201ENST00000378060 ZAR1Q86SH2 424 aa7.42□□□□□ -1.22
VPS36-201ENST00000378060 OR8B12Q8NGG6 310 aa7.42□□□□□ -1.22
VPS36-201ENST00000378060 MAP1LC3BQ9GZQ8 125 aa7.42□□□□□ -1.22
VPS36-201ENST00000378060 SMDT1Q9H4I9 107 aa7.42□□□□□ -1.22
VPS36-201ENST00000378060 ERRFI1Q9UJM3 462 aaPredicted RBP7.42□□□□□ -1.22
VPS36-201ENST00000378060 PIKFYVEQ9Y2I7 2098 aa7.42□□□□□ -1.22
VPS36-201ENST00000378060 SPTBP11277 2137 aa7.42□□□□□ -1.22
VPS36-201ENST00000378060 TRAV20A0A0B4J274 112 aa7.42□□□□□ -1.22
VPS36-201ENST00000378060 FAM24AA6NFZ4 105 aa7.42□□□□□ -1.22
VPS36-201ENST00000378060 TOX3O15405 576 aaPredicted RBP7.42□□□□□ -1.22
VPS36-201ENST00000378060 MPZL1O95297 269 aa7.42□□□□□ -1.22
VPS36-201ENST00000378060 NMBP08949 121 aa7.42□□□□□ -1.22
VPS36-201ENST00000378060 SEC11BP0C7V7 166 aa7.42□□□□□ -1.22
VPS36-201ENST00000378060 ZNF32P17041 273 aa7.42□□□□□ -1.22
VPS36-201ENST00000378060 NTF3P20783 257 aa7.42□□□□□ -1.22
VPS36-201ENST00000378060 CD200P41217 278 aa7.42□□□□□ -1.22
VPS36-201ENST00000378060 GPM6AP51674 278 aa7.42□□□□□ -1.22
VPS36-201ENST00000378060 ETFDHQ16134 617 aa7.42□□□□□ -1.22
VPS36-201ENST00000378060 RHBDD2Q6NTF9 364 aa7.42□□□□□ -1.22
VPS36-201ENST00000378060 LIAT1Q6ZQX7 453 aa7.42□□□□□ -1.22
VPS36-201ENST00000378060 ZADH2Q8N4Q0 377 aa7.42□□□□□ -1.22
VPS36-201ENST00000378060 UBAC2Q8NBM4 344 aa7.42□□□□□ -1.22
VPS36-201ENST00000378060 SF3B6Q9Y3B4 125 aaKnown RBP7.42□□□□□ -1.22
VPS36-201ENST00000378060 WDFY3Q8IZQ1 3526 aa7.42□□□□□ -1.22
VPS36-201ENST00000378060 ALPK2Q86TB3 2170 aa7.42□□□□□ -1.22
VPS36-201ENST00000378060 ELOA3CA0A087WX78 387 aaPredicted RBP7.42□□□□□ -1.22
VPS36-201ENST00000378060 UBE2L5PA0A1B0GUS4 154 aa7.42□□□□□ -1.22
VPS36-201ENST00000378060 LIPT2A6NK58 231 aa7.42□□□□□ -1.22
VPS36-201ENST00000378060 OR5B21A6NL26 309 aa7.42□□□□□ -1.22
VPS36-201ENST00000378060 SHISA7A6NL88 538 aa7.42□□□□□ -1.22
VPS36-201ENST00000378060 NTN1O95631 604 aa7.42□□□□□ -1.22
VPS36-201ENST00000378060 SDHBP21912 280 aa7.42□□□□□ -1.22
VPS36-201ENST00000378060 DUSP2Q05923 314 aa7.42□□□□□ -1.22
VPS36-201ENST00000378060 SLC38A11Q08AI6 406 aa7.42□□□□□ -1.22
VPS36-201ENST00000378060 FAM209AQ5JX71 171 aa7.42□□□□□ -1.22
VPS36-201ENST00000378060 C20orf196Q8IYI0 205 aa7.42□□□□□ -1.22
VPS36-201ENST00000378060 FAM181AQ8N9Y4 354 aa7.42□□□□□ -1.22
VPS36-201ENST00000378060 FAM173AQ9BQD7 235 aa7.42□□□□□ -1.22
VPS36-201ENST00000378060 PARP11Q9NR21 331 aa7.42□□□□□ -1.22
VPS36-201ENST00000378060 PPP1R14DQ9NXH3 145 aa7.42□□□□□ -1.22
VPS36-201ENST00000378060 SHISA8B8ZZ34 492 aa7.41□□□□□ -1.22
VPS36-201ENST00000378060 ONECUT2O95948 504 aa7.41□□□□□ -1.22
VPS36-201ENST00000378060 KRASP01116 189 aa7.41□□□□□ -1.22
VPS36-201ENST00000378060 C1QCP02747 245 aa7.41□□□□□ -1.22
VPS36-201ENST00000378060 MMP7P09237 267 aaPredicted RBP7.41□□□□□ -1.22
VPS36-201ENST00000378060 UBE2G2P60604 165 aa7.41□□□□□ -1.22
VPS36-201ENST00000378060 SUMO1P63165 101 aaKnown RBP7.41□□□□□ -1.22
VPS36-201ENST00000378060 C1QL3Q5VWW1 255 aa7.41□□□□□ -1.22
VPS36-201ENST00000378060 OR10AC1Q8NH08 325 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms