RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 ZDHHC11Q9H8X9 412 aa7.74□□□□□ -1.17
PCDH9-202ENST00000377865 VAX2Q9UIW0 290 aa7.74□□□□□ -1.17
PCDH9-202ENST00000377865 GREB1Q4ZG55 1949 aa7.74□□□□□ -1.17
PCDH9-202ENST00000377865 NUMA1Q14980 2115 aa7.74□□□□□ -1.17
PCDH9-202ENST00000377865 A0A1B0GTI1 187 aa7.74□□□□□ -1.17
PCDH9-202ENST00000377865 EML2O95834 649 aa7.74□□□□□ -1.17
PCDH9-202ENST00000377865 COL9A1P20849 921 aa7.74□□□□□ -1.17
PCDH9-202ENST00000377865 ASCL1P50553 236 aa7.74□□□□□ -1.17
PCDH9-202ENST00000377865 SUCLG1P53597 346 aaKnown RBP7.74□□□□□ -1.17
PCDH9-202ENST00000377865 INSM1Q01101 510 aaPredicted RBP7.74□□□□□ -1.17
PCDH9-202ENST00000377865 OR8G1Q15617 311 aa7.74□□□□□ -1.17
PCDH9-202ENST00000377865 C1QL3Q5VWW1 255 aa7.74□□□□□ -1.17
PCDH9-202ENST00000377865 TBC1D26Q86UD7 250 aa7.74□□□□□ -1.17
PCDH9-202ENST00000377865 FAM58AQ8N1B3 248 aa7.74□□□□□ -1.17
PCDH9-202ENST00000377865 APOBEC3DQ96AK3 386 aaPredicted RBP7.74□□□□□ -1.17
PCDH9-202ENST00000377865 LPAR5Q9H1C0 372 aa7.74□□□□□ -1.17
PCDH9-202ENST00000377865 SLC35D1Q9NTN3 355 aa7.74□□□□□ -1.17
PCDH9-202ENST00000377865 TRAV14DV4A0A0A6YYC5 116 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 IGHV5-51A0A0C4DH38 117 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 G3V3Y1 287 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 ZIC2O95409 532 aaPredicted RBP7.73□□□□□ -1.17
PCDH9-202ENST00000377865 DAOP14920 347 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 OR2B11Q5JQS5 317 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 LINC00114Q6XXX2 140 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.73□□□□□ -1.17
PCDH9-202ENST00000377865 FOXB1Q99853 325 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 GNG12Q9UBI6 72 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 TIMM8BQ9Y5J9 83 aaPredicted RBP7.73□□□□□ -1.17
PCDH9-202ENST00000377865 MGAMO43451 1857 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 IGKV1D-42A0A075B6H8 117 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 K7EQS6 105 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 HSPB1P04792 205 aaKnown RBP7.73□□□□□ -1.17
PCDH9-202ENST00000377865 TNFSF4P23510 183 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 TAS2R45P59539 299 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 MGAT2Q10469 447 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 TMEM183BQ1AE95 376 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 PHYHD1Q5SRE7 291 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 DCAF12Q5T6F0 453 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 SFTPA1Q8IWL2 248 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 POC1AQ8NBT0 407 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 ZNF721Q8TF20 911 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 HIST1H2BAQ96A08 127 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 VAMP8Q9BV40 100 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 PRO1933Q9H354 126 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 PARD6AQ9NPB6 346 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 MTCH1Q9NZJ7 389 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 LINC01387J3KSC0 135 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 SLC25A6P12236 298 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 CXCL12P48061 93 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 SLC35E3Q7Z769 313 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 OR2V1Q8NHB1 315 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 SLC2A9Q9NRM0 540 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 IGHV3-15A0A0B4J1V0 119 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 OR5H15A6NDH6 313 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 CRYM-AS1A6NIL9 109 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 OR5H1A6NKK0 313 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 M0R143 59 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 SIGLEC5O15389 551 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 TIMM8AO60220 97 aaPredicted RBP7.73□□□□□ -1.17
PCDH9-202ENST00000377865 CYB561P49447 251 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 PPP1CAP62136 330 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 IGLV3-21P80748 117 aaPredicted RBP7.73□□□□□ -1.17
PCDH9-202ENST00000377865 SIGLEC14Q08ET2 396 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 C9orf152Q5JTZ5 239 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 PRAMEF5Q5TYX0 476 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 PRAMEF6Q5VXH4 476 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 TIPARPQ7Z3E1 657 aaKnown RBP7.73□□□□□ -1.17
PCDH9-202ENST00000377865 S100A7AQ86SG5 101 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 OR10V1Q8NGI7 309 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 SCARF2Q96GP6 870 aaPredicted RBP7.73□□□□□ -1.17
PCDH9-202ENST00000377865 CHRDL1Q9BU40 450 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 REG4Q9BYZ8 158 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 FOXQ1Q9C009 403 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 LYRM2Q9NU23 88 aaPredicted RBP7.73□□□□□ -1.17
PCDH9-202ENST00000377865 C5orf49A4QMS7 147 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 ZNF732B4DXR9 585 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 B4GALT1P15291 398 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 MPZP25189 248 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 LPAR6P43657 344 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 ZNF321PQ8N8H1 164 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 OR8U1Q8NH10 309 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 G6PC2Q9NQR9 355 aa7.73□□□□□ -1.17
PCDH9-202ENST00000377865 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.72□□□□□ -1.17
PCDH9-202ENST00000377865 FOXS1O43638 330 aa7.72□□□□□ -1.17
PCDH9-202ENST00000377865 VDAC1P21796 283 aa7.72□□□□□ -1.17
PCDH9-202ENST00000377865 P2RY4P51582 365 aa7.72□□□□□ -1.17
PCDH9-202ENST00000377865 POLR2GP62487 172 aaKnown RBP eCLIP7.72□□□□□ -1.17
PCDH9-202ENST00000377865 MRGPRGQ86SM5 289 aa7.72□□□□□ -1.17
PCDH9-202ENST00000377865 LINC00596Q86U02 117 aa7.72□□□□□ -1.17
PCDH9-202ENST00000377865 AMELYQ99218 206 aa7.72□□□□□ -1.17
PCDH9-202ENST00000377865 TMEM147Q9BVK8 224 aa7.72□□□□□ -1.17
PCDH9-202ENST00000377865 A0A0U1RQV5 110 aa7.72□□□□□ -1.17
PCDH9-202ENST00000377865 SHISA8B8ZZ34 492 aa7.72□□□□□ -1.17
PCDH9-202ENST00000377865 SIRPB1O00241 398 aa7.72□□□□□ -1.17
PCDH9-202ENST00000377865 CYC1P08574 325 aa7.72□□□□□ -1.17
PCDH9-202ENST00000377865 CST2P09228 141 aa7.72□□□□□ -1.17
PCDH9-202ENST00000377865 IL9P15248 144 aa7.72□□□□□ -1.17
PCDH9-202ENST00000377865 CD46P15529 392 aa7.72□□□□□ -1.17
PCDH9-202ENST00000377865 PMS2P11Q13670 270 aa7.72□□□□□ -1.17
PCDH9-202ENST00000377865 IGFBP7Q16270 282 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms