RNA–Protein interactions for RNA: ENST00000377294.2

ZKSCAN4-201, Transcript of zinc finger with KRAB and SCAN domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZKSCAN4, Length 2,375 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN4-201ENST00000377294 DUX4L3P0CJ86 424 aa12.52□□□□□ -0.4
ZKSCAN4-201ENST00000377294 DUX4L4P0CJ87 422 aa12.52□□□□□ -0.4
ZKSCAN4-201ENST00000377294 DUX4L5P0CJ88 424 aa12.52□□□□□ -0.4
ZKSCAN4-201ENST00000377294 DUX4L6P0CJ89 424 aa12.52□□□□□ -0.4
ZKSCAN4-201ENST00000377294 DUX4L7P0CJ90 424 aa12.52□□□□□ -0.4
ZKSCAN4-201ENST00000377294 CD79AP11912 226 aa12.52□□□□□ -0.4
ZKSCAN4-201ENST00000377294 DUSP1P28562 367 aa12.52□□□□□ -0.4
ZKSCAN4-201ENST00000377294 VASH2Q86V25 355 aa12.52□□□□□ -0.4
ZKSCAN4-201ENST00000377294 OR56B2PQ8NGI1 322 aa12.52□□□□□ -0.4
ZKSCAN4-201ENST00000377294 ERGIC1Q969X5 290 aa12.52□□□□□ -0.4
ZKSCAN4-201ENST00000377294 SLAMF9Q96A28 289 aa12.52□□□□□ -0.4
ZKSCAN4-201ENST00000377294 CNTNAP3BQ96NU0 1288 aa12.52□□□□□ -0.4
ZKSCAN4-201ENST00000377294 IER2Q9BTL4 223 aa12.52□□□□□ -0.4
ZKSCAN4-201ENST00000377294 PAPOLGQ9BWT3 736 aaKnown RBP12.52□□□□□ -0.4
ZKSCAN4-201ENST00000377294 CNTNAP3Q9BZ76 1288 aa12.52□□□□□ -0.4
ZKSCAN4-201ENST00000377294 TMEM100Q9NV29 134 aa12.52□□□□□ -0.4
ZKSCAN4-201ENST00000377294 DUX4Q9UBX2 424 aa12.52□□□□□ -0.4
ZKSCAN4-201ENST00000377294 TMEM218A2RU14 115 aa12.52□□□□□ -0.41
ZKSCAN4-201ENST00000377294 RRP8O43159 456 aaKnown RBP12.52□□□□□ -0.41
ZKSCAN4-201ENST00000377294 DNPH1O43598 174 aa12.52□□□□□ -0.41
ZKSCAN4-201ENST00000377294 MRPL33O75394 65 aaKnown RBP12.52□□□□□ -0.41
ZKSCAN4-201ENST00000377294 ZNF728P0DKX0 622 aa12.52□□□□□ -0.41
ZKSCAN4-201ENST00000377294 LPAR6P43657 344 aa12.52□□□□□ -0.41
ZKSCAN4-201ENST00000377294 OR2M7Q8NG81 312 aa12.52□□□□□ -0.41
ZKSCAN4-201ENST00000377294 ZNF442Q9H7R0 627 aa12.52□□□□□ -0.41
ZKSCAN4-201ENST00000377294 NECAP2Q9NVZ3 263 aa12.52□□□□□ -0.41
ZKSCAN4-201ENST00000377294 FBXL17Q9UF56 701 aa12.52□□□□□ -0.41
ZKSCAN4-201ENST00000377294 KNTC1P50748 2209 aa12.51□□□□□ -0.41
ZKSCAN4-201ENST00000377294 MED19A0JLT2 244 aaPredicted RBP12.51□□□□□ -0.41
ZKSCAN4-201ENST00000377294 LNP1A1A4G5 178 aa12.51□□□□□ -0.41
ZKSCAN4-201ENST00000377294 C5orf49A4QMS7 147 aa12.51□□□□□ -0.41
ZKSCAN4-201ENST00000377294 NGFP01138 241 aa12.51□□□□□ -0.41
ZKSCAN4-201ENST00000377294 BCL3P20749 454 aa12.51□□□□□ -0.41
ZKSCAN4-201ENST00000377294 RPL12P30050 165 aaKnown RBP12.51□□□□□ -0.41
ZKSCAN4-201ENST00000377294 MPLP40238 635 aa12.51□□□□□ -0.41
ZKSCAN4-201ENST00000377294 LHX2P50458 406 aa12.51□□□□□ -0.41
ZKSCAN4-201ENST00000377294 GPM6AP51674 278 aa12.51□□□□□ -0.41
ZKSCAN4-201ENST00000377294 CBLN2Q8IUK8 224 aa12.51□□□□□ -0.41
ZKSCAN4-201ENST00000377294 OR5T2Q8NGG2 359 aa12.51□□□□□ -0.41
ZKSCAN4-201ENST00000377294 OR52M1Q8NGK5 317 aa12.51□□□□□ -0.41
ZKSCAN4-201ENST00000377294 RNF141Q8WVD5 230 aa12.51□□□□□ -0.41
ZKSCAN4-201ENST00000377294 RTN4IP1Q8WWV3 396 aaPredicted RBP12.51□□□□□ -0.41
ZKSCAN4-201ENST00000377294 CPNE4Q96A23 557 aaPredicted RBP12.51□□□□□ -0.41
ZKSCAN4-201ENST00000377294 TSNAXQ99598 290 aaKnown RBP12.51□□□□□ -0.41
ZKSCAN4-201ENST00000377294 ZNF703Q9H7S9 590 aaPredicted RBP12.51□□□□□ -0.41
ZKSCAN4-201ENST00000377294 TREM1Q9NP99 234 aa12.51□□□□□ -0.41
ZKSCAN4-201ENST00000377294 ATG12O94817 140 aa12.51□□□□□ -0.41
ZKSCAN4-201ENST00000377294 IGHEP01854 428 aa12.51□□□□□ -0.41
ZKSCAN4-201ENST00000377294 IL32P24001 234 aa12.51□□□□□ -0.41
ZKSCAN4-201ENST00000377294 ASCL1P50553 236 aa12.51□□□□□ -0.41
ZKSCAN4-201ENST00000377294 SURF2Q15527 256 aaPredicted RBP12.51□□□□□ -0.41
ZKSCAN4-201ENST00000377294 OR8B8Q15620 311 aa12.51□□□□□ -0.41
ZKSCAN4-201ENST00000377294 ABCA11PQ4W5N1 156 aa12.51□□□□□ -0.41
ZKSCAN4-201ENST00000377294 PDSS1Q5T2R2 415 aa12.51□□□□□ -0.41
ZKSCAN4-201ENST00000377294 NSUN5P2Q63ZY6 315 aa12.51□□□□□ -0.41
ZKSCAN4-201ENST00000377294 TLNRD1Q9H1K6 362 aa12.51□□□□□ -0.41
ZKSCAN4-201ENST00000377294 TAF9BQ9HBM6 251 aa12.51□□□□□ -0.41
ZKSCAN4-201ENST00000377294 SLC2A9Q9NRM0 540 aa12.51□□□□□ -0.41
ZKSCAN4-201ENST00000377294 SLC7A11Q9UPY5 501 aa12.51□□□□□ -0.41
ZKSCAN4-201ENST00000377294 DMXL1Q9Y485 3027 aa12.51□□□□□ -0.41
ZKSCAN4-201ENST00000377294 ZNF816-ZNF321PA0A0X1KG74 233 aa12.5□□□□□ -0.41
ZKSCAN4-201ENST00000377294 TOR1AO14656 332 aa12.5□□□□□ -0.41
ZKSCAN4-201ENST00000377294 LILRA1O75019 489 aa12.5□□□□□ -0.41
ZKSCAN4-201ENST00000377294 MBPP02686 304 aaPredicted RBP12.5□□□□□ -0.41
ZKSCAN4-201ENST00000377294 AADACP22760 399 aa12.5□□□□□ -0.41
ZKSCAN4-201ENST00000377294 ITGA3P26006 1051 aa12.5□□□□□ -0.41
ZKSCAN4-201ENST00000377294 CLDN18P56856 261 aa12.5□□□□□ -0.41
ZKSCAN4-201ENST00000377294 RBM11P57052 281 aaKnown RBP12.5□□□□□ -0.41
ZKSCAN4-201ENST00000377294 TMEM187Q14656 261 aa12.5□□□□□ -0.41
ZKSCAN4-201ENST00000377294 ATP1A1-AS1Q5TC04 95 aa12.5□□□□□ -0.41
ZKSCAN4-201ENST00000377294 ASCL4Q6XD76 172 aa12.5□□□□□ -0.41
ZKSCAN4-201ENST00000377294 ZNF488Q96MN9 340 aa12.5□□□□□ -0.41
ZKSCAN4-201ENST00000377294 BCO1Q9HAY6 547 aa12.5□□□□□ -0.41
ZKSCAN4-201ENST00000377294 IL17BQ9UHF5 180 aa12.5□□□□□ -0.41
ZKSCAN4-201ENST00000377294 HSF4Q9ULV5 492 aa12.5□□□□□ -0.41
ZKSCAN4-201ENST00000377294 F8W036 122 aa12.5□□□□□ -0.41
ZKSCAN4-201ENST00000377294 K7EPK0 472 aa12.5□□□□□ -0.41
ZKSCAN4-201ENST00000377294 CA11O75493 328 aa12.5□□□□□ -0.41
ZKSCAN4-201ENST00000377294 MED6O75586 246 aa12.5□□□□□ -0.41
ZKSCAN4-201ENST00000377294 DEDDO75618 318 aa12.5□□□□□ -0.41
ZKSCAN4-201ENST00000377294 FUT6P51993 359 aa12.5□□□□□ -0.41
ZKSCAN4-201ENST00000377294 BLOC1S1P78537 153 aa12.5□□□□□ -0.41
ZKSCAN4-201ENST00000377294 MEX3BQ6ZN04 569 aaKnown RBP12.5□□□□□ -0.41
ZKSCAN4-201ENST00000377294 LDLRAD3Q86YD5 345 aa12.5□□□□□ -0.41
ZKSCAN4-201ENST00000377294 FAM71E2Q8N5Q1 922 aa12.5□□□□□ -0.41
ZKSCAN4-201ENST00000377294 ADAMTS17Q8TE56 1095 aa12.5□□□□□ -0.41
ZKSCAN4-201ENST00000377294 ARL11Q969Q4 196 aa12.5□□□□□ -0.41
ZKSCAN4-201ENST00000377294 NAA60Q9H7X0 242 aa12.5□□□□□ -0.41
ZKSCAN4-201ENST00000377294 LPAR3Q9UBY5 353 aa12.5□□□□□ -0.41
ZKSCAN4-201ENST00000377294 AMDHD2Q9Y303 409 aa12.5□□□□□ -0.41
ZKSCAN4-201ENST00000377294 SLC33A1O00400 549 aaPredicted RBP12.49□□□□□ -0.41
ZKSCAN4-201ENST00000377294 FARS2O95363 451 aaKnown RBP12.49□□□□□ -0.41
ZKSCAN4-201ENST00000377294 MUC1P15941 1255 aaPredicted RBP12.49□□□□□ -0.41
ZKSCAN4-201ENST00000377294 HAAOP46952 286 aa12.49□□□□□ -0.41
ZKSCAN4-201ENST00000377294 TMEM33P57088 247 aa12.49□□□□□ -0.41
ZKSCAN4-201ENST00000377294 NAAAQ02083 359 aa12.49□□□□□ -0.41
ZKSCAN4-201ENST00000377294 OR1C1Q15619 314 aa12.49□□□□□ -0.41
ZKSCAN4-201ENST00000377294 RIPPLY2Q5TAB7 128 aa12.49□□□□□ -0.41
ZKSCAN4-201ENST00000377294 DHRS11Q6UWP2 260 aa12.49□□□□□ -0.41
ZKSCAN4-201ENST00000377294 HPSE2Q8WWQ2 592 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms