RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 CST11Q9H112 138 aa13.62□□□□□ -0.23
FXN-201ENST00000377270 RYDENQ9NUL5 291 aaKnown RBP13.62□□□□□ -0.23
FXN-201ENST00000377270 COX11Q9Y6N1 276 aa13.62□□□□□ -0.23
FXN-201ENST00000377270 VCANP13611 3396 aa13.62□□□□□ -0.23
FXN-201ENST00000377270 PRR32B1ATL7 298 aa13.62□□□□□ -0.23
FXN-201ENST00000377270 ZNF736B4DX44 427 aaPredicted RBP13.62□□□□□ -0.23
FXN-201ENST00000377270 OR6A2O95222 327 aa13.62□□□□□ -0.23
FXN-201ENST00000377270 CYB5AP00167 134 aa13.62□□□□□ -0.23
FXN-201ENST00000377270 OR3A2P47893 321 aa13.62□□□□□ -0.23
FXN-201ENST00000377270 ZNF684Q5T5D7 378 aa13.62□□□□□ -0.23
FXN-201ENST00000377270 CADM4Q8NFZ8 388 aa13.62□□□□□ -0.23
FXN-201ENST00000377270 ZNF524Q96C55 264 aa13.62□□□□□ -0.23
FXN-201ENST00000377270 HIST1H2AAQ96QV6 131 aa13.62□□□□□ -0.23
FXN-201ENST00000377270 ABHD14AQ9BUJ0 271 aa13.62□□□□□ -0.23
FXN-201ENST00000377270 FOXQ1Q9C009 403 aa13.62□□□□□ -0.23
FXN-201ENST00000377270 CHRNA10Q9GZZ6 450 aa13.62□□□□□ -0.23
FXN-201ENST00000377270 FOXD3Q9UJU5 478 aaPredicted RBP13.62□□□□□ -0.23
FXN-201ENST00000377270 SPAG17Q6Q759 2223 aa13.62□□□□□ -0.23
FXN-201ENST00000377270 CDC14CA4D256 554 aa13.61□□□□□ -0.23
FXN-201ENST00000377270 TNFSF13O75888 250 aa13.61□□□□□ -0.23
FXN-201ENST00000377270 MMP23AO75900 390 aa13.61□□□□□ -0.23
FXN-201ENST00000377270 GRPRP30550 384 aa13.61□□□□□ -0.23
FXN-201ENST00000377270 CDKN2AP42771 156 aaKnown RBP13.61□□□□□ -0.23
FXN-201ENST00000377270 NXPH1P58417 271 aa13.61□□□□□ -0.23
FXN-201ENST00000377270 ZNF74Q16587 644 aa13.61□□□□□ -0.23
FXN-201ENST00000377270 EXD3Q8N9H8 876 aa13.61□□□□□ -0.23
FXN-201ENST00000377270 ZNF563Q8TA94 476 aa13.61□□□□□ -0.23
FXN-201ENST00000377270 NMNAT2Q9BZQ4 307 aa13.61□□□□□ -0.23
FXN-201ENST00000377270 ZNF552Q9H707 407 aaPredicted RBP13.61□□□□□ -0.23
FXN-201ENST00000377270 SPEGQ15772 3267 aa13.61□□□□□ -0.23
FXN-201ENST00000377270 C13orf42A0A1B0GVH6 325 aa13.61□□□□□ -0.23
FXN-201ENST00000377270 A0A1B0GVT2 93 aa13.61□□□□□ -0.23
FXN-201ENST00000377270 H0YIZ8 118 aa13.61□□□□□ -0.23
FXN-201ENST00000377270 CTSSP25774 331 aa13.61□□□□□ -0.23
FXN-201ENST00000377270 GLIPR1P48060 266 aa13.61□□□□□ -0.23
FXN-201ENST00000377270 S100A10P60903 97 aa13.61□□□□□ -0.23
FXN-201ENST00000377270 C2orf76Q3KRA6 126 aa13.61□□□□□ -0.23
FXN-201ENST00000377270 COA6Q5JTJ3 125 aaKnown RBP13.61□□□□□ -0.23
FXN-201ENST00000377270 DYRK2Q92630 601 aa13.61□□□□□ -0.23
FXN-201ENST00000377270 ERGIC1Q969X5 290 aa13.61□□□□□ -0.23
FXN-201ENST00000377270 SPACA9Q96E40 222 aaPredicted RBP13.61□□□□□ -0.23
FXN-201ENST00000377270 SDSLQ96GA7 329 aa13.61□□□□□ -0.23
FXN-201ENST00000377270 TSSK2Q96PF2 358 aa13.61□□□□□ -0.23
FXN-201ENST00000377270 MEGF9Q9H1U4 602 aa13.61□□□□□ -0.23
FXN-201ENST00000377270 KCNK15Q9H427 330 aa13.61□□□□□ -0.23
FXN-201ENST00000377270 SLC2A9Q9NRM0 540 aa13.61□□□□□ -0.23
FXN-201ENST00000377270 HSF4Q9ULV5 492 aa13.61□□□□□ -0.23
FXN-201ENST00000377270 ST3GAL6Q9Y274 331 aa13.61□□□□□ -0.23
FXN-201ENST00000377270 MPDZO75970 2070 aa13.61□□□□□ -0.23
FXN-201ENST00000377270 PPP5D1E7EU14 171 aa13.6□□□□□ -0.23
FXN-201ENST00000377270 H3BMH7 237 aa13.6□□□□□ -0.23
FXN-201ENST00000377270 K7ERU9 68 aa13.6□□□□□ -0.23
FXN-201ENST00000377270 TACSTD2P09758 323 aa13.6□□□□□ -0.23
FXN-201ENST00000377270 CTXN1P60606 82 aa13.6□□□□□ -0.23
FXN-201ENST00000377270 P2RY6Q15077 328 aa13.6□□□□□ -0.23
FXN-201ENST00000377270 UNQ5815/PRO19632Q6UWF5 114 aa13.6□□□□□ -0.23
FXN-201ENST00000377270 SHISA2Q6UWI4 295 aa13.6□□□□□ -0.23
FXN-201ENST00000377270 DNASE2BQ8WZ79 361 aa13.6□□□□□ -0.23
FXN-201ENST00000377270 FAM3DQ96BQ1 224 aa13.6□□□□□ -0.23
FXN-201ENST00000377270 NMES1Q9C002 83 aa13.6□□□□□ -0.23
FXN-201ENST00000377270 SLCO5A1Q9H2Y9 848 aa13.6□□□□□ -0.23
FXN-201ENST00000377270 CDH20Q9HBT6 801 aa13.6□□□□□ -0.23
FXN-201ENST00000377270 FRRS1LQ9P0K9 344 aa13.6□□□□□ -0.23
FXN-201ENST00000377270 ASXL3Q9C0F0 2248 aa13.6□□□□□ -0.23
FXN-201ENST00000377270 TRBV5-7A0A0A0MS05 114 aa13.6□□□□□ -0.23
FXN-201ENST00000377270 DDAH2O95865 285 aa13.6□□□□□ -0.23
FXN-201ENST00000377270 ZNF28P17035 718 aa13.6□□□□□ -0.23
FXN-201ENST00000377270 CFPP27918 469 aa13.6□□□□□ -0.23
FXN-201ENST00000377270 HTD2P86397 168 aa13.6□□□□□ -0.23
FXN-201ENST00000377270 EGR4Q05215 589 aa13.6□□□□□ -0.23
FXN-201ENST00000377270 ALG10Q5BKT4 473 aa13.6□□□□□ -0.23
FXN-201ENST00000377270 C1orf189Q5VU69 101 aa13.6□□□□□ -0.23
FXN-201ENST00000377270 NOXO1Q8NFA2 376 aa13.6□□□□□ -0.23
FXN-201ENST00000377270 OR11L1Q8NGX0 322 aa13.6□□□□□ -0.23
FXN-201ENST00000377270 OR1L3Q8NH93 324 aa13.6□□□□□ -0.23
FXN-201ENST00000377270 ZNF721Q8TF20 911 aa13.6□□□□□ -0.23
FXN-201ENST00000377270 ADIPOR1Q96A54 375 aa13.6□□□□□ -0.23
FXN-201ENST00000377270 LOXL4Q96JB6 756 aa13.6□□□□□ -0.23
FXN-201ENST00000377270 GPX7Q96SL4 187 aaPredicted RBP13.6□□□□□ -0.23
FXN-201ENST00000377270 ALG12Q9BV10 488 aa13.6□□□□□ -0.23
FXN-201ENST00000377270 RTN4RQ9BZR6 473 aa13.6□□□□□ -0.23
FXN-201ENST00000377270 SLC5A7Q9GZV3 580 aa13.6□□□□□ -0.23
FXN-201ENST00000377270 MMP25Q9NPA2 562 aa13.6□□□□□ -0.23
FXN-201ENST00000377270 HIF3AQ9Y2N7 669 aa13.6□□□□□ -0.23
FXN-201ENST00000377270 IGHV1OR21-1A0A087WYE8 117 aa13.6□□□□□ -0.23
FXN-201ENST00000377270 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.6□□□□□ -0.23
FXN-201ENST00000377270 FRG2CA6NGY1 282 aa13.6□□□□□ -0.23
FXN-201ENST00000377270 PDGFBP01127 241 aaPredicted RBP13.6□□□□□ -0.23
FXN-201ENST00000377270 IGKV3-11P04433 115 aa13.6□□□□□ -0.23
FXN-201ENST00000377270 CSN2P05814 226 aa13.6□□□□□ -0.23
FXN-201ENST00000377270 CYC1P08574 325 aa13.6□□□□□ -0.23
FXN-201ENST00000377270 CD37P11049 281 aa13.6□□□□□ -0.23
FXN-201ENST00000377270 MYF5P13349 255 aa13.6□□□□□ -0.23
FXN-201ENST00000377270 FUT3P21217 361 aa13.6□□□□□ -0.23
FXN-201ENST00000377270 UCP2P55851 309 aa13.6□□□□□ -0.23
FXN-201ENST00000377270 TPTE2P1Q5T6R2 138 aa13.6□□□□□ -0.23
FXN-201ENST00000377270 FAM220AQ7Z4H9 259 aa13.6□□□□□ -0.23
FXN-201ENST00000377270 TMEM106AQ96A25 262 aa13.6□□□□□ -0.23
FXN-201ENST00000377270 KTI12Q96EK9 354 aaPredicted RBP13.6□□□□□ -0.23
FXN-201ENST00000377270 NUDT9Q9BW91 350 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms