RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 IFNA2P01563 188 aa8.25□□□□□ -1.09
TRIM39-202ENST00000376659 CYCSP99999 105 aaKnown RBP8.25□□□□□ -1.09
TRIM39-202ENST00000376659 BAP18Q8IXM2 172 aa8.25□□□□□ -1.09
TRIM39-202ENST00000376659 MRPL24Q96A35 216 aaKnown RBP8.25□□□□□ -1.09
TRIM39-202ENST00000376659 TECTBQ96PL2 329 aa8.25□□□□□ -1.09
TRIM39-202ENST00000376659 ZPBPQ9BS86 351 aa8.25□□□□□ -1.09
TRIM39-202ENST00000376659 WFDC1Q9HC57 220 aa8.25□□□□□ -1.09
TRIM39-202ENST00000376659 P4HTMQ9NXG6 502 aa8.25□□□□□ -1.09
TRIM39-202ENST00000376659 LPAR3Q9UBY5 353 aa8.25□□□□□ -1.09
TRIM39-202ENST00000376659 TIMM10BQ9Y5J6 103 aa8.25□□□□□ -1.09
TRIM39-202ENST00000376659 FREM1Q5H8C1 2179 aa8.25□□□□□ -1.09
TRIM39-202ENST00000376659 C1QTNF9BB2RNN3 333 aa8.25□□□□□ -1.09
TRIM39-202ENST00000376659 S100A9P06702 114 aaKnown RBP8.25□□□□□ -1.09
TRIM39-202ENST00000376659 WNT2P09544 360 aa8.25□□□□□ -1.09
TRIM39-202ENST00000376659 ATXN7L3Q14CW9 347 aaPredicted RBP8.25□□□□□ -1.09
TRIM39-202ENST00000376659 DCAF12Q5T6F0 453 aa8.25□□□□□ -1.09
TRIM39-202ENST00000376659 ZNF295-AS1Q8N0V1 137 aa8.25□□□□□ -1.09
TRIM39-202ENST00000376659 DMBX1Q8NFW5 382 aa8.25□□□□□ -1.09
TRIM39-202ENST00000376659 MICU1Q9BPX6 476 aa8.25□□□□□ -1.09
TRIM39-202ENST00000376659 PDCD10Q9BUL8 212 aa8.25□□□□□ -1.09
TRIM39-202ENST00000376659 METTL9Q9H1A3 318 aa8.25□□□□□ -1.09
TRIM39-202ENST00000376659 COA4Q9NYJ1 87 aa8.25□□□□□ -1.09
TRIM39-202ENST00000376659 IGKV1-6A0A0C4DH72 117 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 LNP1A1A4G5 178 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 TMEM218A2RU14 115 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 CLEC18AA5D8T8 446 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 FAM90A10PA6NDY2 464 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 FAM90A18PA6NE21 464 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 FAM90A16PA6NEW6 464 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 FAM90A20PA6NIJ5 464 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 FAM90A8PA6NJQ4 464 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 FAM90A7PA6NKC0 464 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 FAM90A22PA8MWA6 464 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 FAM90A12PA8MX19 464 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 FAM90A5PA8MXJ8 464 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 FAM90A23PA8MXZ1 464 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 IFNA6P05013 189 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 CD5P06127 495 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 FAM90A15PP0C7V4 464 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 FAM90A13PP0C7W8 464 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 FAM90A14PP0C7W9 464 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 FAM90A24PP0C7X0 464 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 COX5BP10606 129 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 RCC1P18754 421 aaPredicted RBP8.24□□□□□ -1.09
TRIM39-202ENST00000376659 GABRR1P24046 479 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 NPBWR2P48146 333 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 CNN3Q15417 329 aaKnown RBP8.24□□□□□ -1.09
TRIM39-202ENST00000376659 SPINK14Q6IE38 97 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.24□□□□□ -1.09
TRIM39-202ENST00000376659 TMEM200AQ86VY9 491 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 SAXO1Q8IYX7 474 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 CLEC18CQ8NCF0 446 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 THAP6Q8TBB0 222 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 TMEM68Q96MH6 324 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 NIT2Q9NQR4 276 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 PLSCR2Q9NRY7 297 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 SLC7A10Q9NS82 523 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 C9JQL5 133 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 H7C2Y5 167 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 ATG12O94817 140 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 CST4P01036 141 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 NRASP01111 189 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 GAPDHP04406 335 aaKnown RBP8.24□□□□□ -1.09
TRIM39-202ENST00000376659 LPAR6P43657 344 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 FUT6P51993 359 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 MTCP1P56278 107 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 ARL6IP1Q15041 203 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 TMEM156Q8N614 296 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 OR14L1PQ8NHC6 308 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 GLYATL2Q8WU03 294 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 JSRP1Q96MG2 331 aaPredicted RBP8.24□□□□□ -1.09
TRIM39-202ENST00000376659 TAAR9Q96RI9 348 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 GPER1Q99527 375 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 ZNF471Q9BX82 626 aaPredicted RBP8.24□□□□□ -1.09
TRIM39-202ENST00000376659 MMP26Q9NRE1 261 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 ZNF724A8MTY0 619 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 LRP3O75074 770 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 TUSC2O75896 110 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 IGLV2-14P01704 120 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 MBPP02686 304 aaPredicted RBP8.24□□□□□ -1.09
TRIM39-202ENST00000376659 P04436 131 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 RBP2P50120 134 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 GUSBP1Q15486 140 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 HFEQ30201 348 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 GGNBP1Q5YKI7 109 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 AAED1Q7RTV5 226 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 C5orf24Q7Z6I8 188 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 OSR2Q8N2R0 312 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 CA5BP1Q8WTZ4 195 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 LRRC46Q96FV0 321 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 NAA60Q9H7X0 242 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 CBY1Q9Y3M2 126 aa8.24□□□□□ -1.09
TRIM39-202ENST00000376659 TRBV6-6A0A0A6YYG2 114 aa8.23□□□□□ -1.09
TRIM39-202ENST00000376659 LAMTOR5O43504 91 aa8.23□□□□□ -1.09
TRIM39-202ENST00000376659 TPT1P13693 172 aaKnown RBP8.23□□□□□ -1.09
TRIM39-202ENST00000376659 HTR5AP47898 357 aa8.23□□□□□ -1.09
TRIM39-202ENST00000376659 SLC16A13Q7RTY0 426 aa8.23□□□□□ -1.09
TRIM39-202ENST00000376659 PUSL1Q8N0Z8 303 aaKnown RBP8.23□□□□□ -1.09
TRIM39-202ENST00000376659 CLRN3Q8NCR9 226 aa8.23□□□□□ -1.09
TRIM39-202ENST00000376659 ERGIC1Q969X5 290 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms