RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 NDNFQ8TB73 568 aa11.92□□□□□ -0.5
HDAC6-204ENST00000376643 PIFOQ8TCI5 191 aa11.92□□□□□ -0.5
HDAC6-204ENST00000376643 SLAMF9Q96A28 289 aa11.92□□□□□ -0.5
HDAC6-204ENST00000376643 SPSB1Q96BD6 273 aa11.92□□□□□ -0.5
HDAC6-204ENST00000376643 CLEC7AQ9BXN2 247 aa11.92□□□□□ -0.5
HDAC6-204ENST00000376643 CADM1Q9BY67 442 aaKnown RBP11.92□□□□□ -0.5
HDAC6-204ENST00000376643 UBE2J1Q9Y385 318 aaPredicted RBP11.92□□□□□ -0.5
HDAC6-204ENST00000376643 AP4S1Q9Y587 144 aa11.92□□□□□ -0.5
HDAC6-204ENST00000376643 A0A1W2PQL4 384 aaPredicted RBP11.91□□□□□ -0.5
HDAC6-204ENST00000376643 A6NIN4 97 aa11.91□□□□□ -0.5
HDAC6-204ENST00000376643 ATP5HO75947 161 aa11.91□□□□□ -0.5
HDAC6-204ENST00000376643 ZNF20P17024 532 aa11.91□□□□□ -0.5
HDAC6-204ENST00000376643 GABRR1P24046 479 aa11.91□□□□□ -0.5
HDAC6-204ENST00000376643 HTR1DP28221 377 aa11.91□□□□□ -0.5
HDAC6-204ENST00000376643 BRS3P32247 399 aa11.91□□□□□ -0.5
HDAC6-204ENST00000376643 VDAC2P45880 294 aaPredicted RBP11.91□□□□□ -0.5
HDAC6-204ENST00000376643 SLC34A1Q06495 639 aa11.91□□□□□ -0.5
HDAC6-204ENST00000376643 UBE2V2Q15819 145 aa11.91□□□□□ -0.5
HDAC6-204ENST00000376643 ODF4Q2M2E3 257 aa11.91□□□□□ -0.5
HDAC6-204ENST00000376643 UTS2BQ765I0 119 aa11.91□□□□□ -0.5
HDAC6-204ENST00000376643 BCDIN3DQ7Z5W3 292 aaKnown RBP11.91□□□□□ -0.5
HDAC6-204ENST00000376643 TRAPPC6BQ86SZ2 158 aa11.91□□□□□ -0.5
HDAC6-204ENST00000376643 ZNF596Q8TC21 504 aa11.91□□□□□ -0.5
HDAC6-204ENST00000376643 TRUB1Q8WWH5 349 aaKnown RBP11.91□□□□□ -0.5
HDAC6-204ENST00000376643 SLC7A6OSQ96CW6 309 aaPredicted RBP11.91□□□□□ -0.5
HDAC6-204ENST00000376643 TBX5Q99593 518 aa11.91□□□□□ -0.5
HDAC6-204ENST00000376643 SERTAD4Q9NUC0 356 aa11.91□□□□□ -0.5
HDAC6-204ENST00000376643 MTCH1Q9NZJ7 389 aa11.91□□□□□ -0.5
HDAC6-204ENST00000376643 TRGV10A0A0A0MS01 117 aa11.9□□□□□ -0.5
HDAC6-204ENST00000376643 IGHV2-26A0A0B4J1V2 119 aa11.9□□□□□ -0.5
HDAC6-204ENST00000376643 LOC107986453A0A1B0GWG9 222 aa11.9□□□□□ -0.5
HDAC6-204ENST00000376643 G3V4G9 280 aa11.9□□□□□ -0.5
HDAC6-204ENST00000376643 PIN1P1O15428 100 aa11.9□□□□□ -0.5
HDAC6-204ENST00000376643 MAGEB4O15481 346 aaPredicted RBP11.9□□□□□ -0.5
HDAC6-204ENST00000376643 CEACAM3P40198 252 aa11.9□□□□□ -0.5
HDAC6-204ENST00000376643 MTCP1P56278 107 aa11.9□□□□□ -0.5
HDAC6-204ENST00000376643 ZNF146Q15072 292 aa11.9□□□□□ -0.5
HDAC6-204ENST00000376643 NSUN5P1Q3KNT7 163 aa11.9□□□□□ -0.5
HDAC6-204ENST00000376643 PLA1AQ53H76 456 aa11.9□□□□□ -0.5
HDAC6-204ENST00000376643 C1orf146Q5VVC0 180 aa11.9□□□□□ -0.5
HDAC6-204ENST00000376643 FAM58AQ8N1B3 248 aa11.9□□□□□ -0.5
HDAC6-204ENST00000376643 BATF2Q8N1L9 274 aa11.9□□□□□ -0.5
HDAC6-204ENST00000376643 R3HDM4Q96D70 268 aa11.9□□□□□ -0.5
HDAC6-204ENST00000376643 GABARAPL3Q9BY60 117 aa11.9□□□□□ -0.5
HDAC6-204ENST00000376643 TMEM133Q9H2Q1 129 aa11.9□□□□□ -0.5
HDAC6-204ENST00000376643 IMPAD1Q9NX62 359 aa11.9□□□□□ -0.5
HDAC6-204ENST00000376643 GNG8Q9UK08 70 aa11.9□□□□□ -0.5
HDAC6-204ENST00000376643 ORC6Q9Y5N6 252 aa11.9□□□□□ -0.5
HDAC6-204ENST00000376643 M0R129 80 aa11.89□□□□□ -0.51
HDAC6-204ENST00000376643 SH2D1BO14796 132 aa11.89□□□□□ -0.51
HDAC6-204ENST00000376643 MITFO75030 526 aaPredicted RBP11.89□□□□□ -0.51
HDAC6-204ENST00000376643 POU3F4P49335 361 aa11.89□□□□□ -0.51
HDAC6-204ENST00000376643 P2RX3P56373 397 aa11.89□□□□□ -0.51
HDAC6-204ENST00000376643 ZNF91Q05481 1191 aa11.89□□□□□ -0.51
HDAC6-204ENST00000376643 SSX6Q7RTT6 188 aa11.89□□□□□ -0.51
HDAC6-204ENST00000376643 CHST4Q8NCG5 386 aa11.89□□□□□ -0.51
HDAC6-204ENST00000376643 CPNE2Q96FN4 548 aaPredicted RBP11.89□□□□□ -0.51
HDAC6-204ENST00000376643 CIB1Q99828 191 aa11.89□□□□□ -0.51
HDAC6-204ENST00000376643 EXOSC4Q9NPD3 245 aaKnown RBP11.89□□□□□ -0.51
HDAC6-204ENST00000376643 NECAP2Q9NVZ3 263 aa11.89□□□□□ -0.51
HDAC6-204ENST00000376643 TAS2R3Q9NYW6 316 aa11.89□□□□□ -0.51
HDAC6-204ENST00000376643 TMEM82A0PJX8 343 aa11.88□□□□□ -0.51
HDAC6-204ENST00000376643 CLIC3O95833 236 aa11.88□□□□□ -0.51
HDAC6-204ENST00000376643 ISG15P05161 165 aa11.88□□□□□ -0.51
HDAC6-204ENST00000376643 ATF1P18846 271 aa11.88□□□□□ -0.51
HDAC6-204ENST00000376643 EPHA2P29317 976 aa11.88□□□□□ -0.51
HDAC6-204ENST00000376643 MEDAGQ5VYS4 303 aa11.88□□□□□ -0.51
HDAC6-204ENST00000376643 CCDC144NLQ6NUI1 221 aa11.88□□□□□ -0.51
HDAC6-204ENST00000376643 TMEM219Q86XT9 240 aa11.88□□□□□ -0.51
HDAC6-204ENST00000376643 SGCDQ92629 289 aa11.88□□□□□ -0.51
HDAC6-204ENST00000376643 CENPNQ96H22 339 aaPredicted RBP11.88□□□□□ -0.51
HDAC6-204ENST00000376643 OPALINQ96PE5 141 aa11.88□□□□□ -0.51
HDAC6-204ENST00000376643 WNT10AQ9GZT5 417 aa11.88□□□□□ -0.51
HDAC6-204ENST00000376643 RIBC2Q9H4K1 309 aa11.88□□□□□ -0.51
HDAC6-204ENST00000376643 LIN7BQ9HAP6 207 aa11.88□□□□□ -0.51
HDAC6-204ENST00000376643 DPM3Q9P2X0 92 aa11.88□□□□□ -0.51
HDAC6-204ENST00000376643 ZNF281Q9Y2X9 895 aa11.88□□□□□ -0.51
HDAC6-204ENST00000376643 HILPDAQ9Y5L2 63 aa11.88□□□□□ -0.51
HDAC6-204ENST00000376643 IGKV1-27A0A075B6S5 117 aa11.87□□□□□ -0.51
HDAC6-204ENST00000376643 FAM90A22PA8MWA6 464 aa11.87□□□□□ -0.51
HDAC6-204ENST00000376643 LEUTXA8MZ59 168 aa11.87□□□□□ -0.51
HDAC6-204ENST00000376643 OOSP1A8MZH6 123 aa11.87□□□□□ -0.51
HDAC6-204ENST00000376643 M0QZK8 103 aa11.87□□□□□ -0.51
HDAC6-204ENST00000376643 CIB2O75838 187 aa11.87□□□□□ -0.51
HDAC6-204ENST00000376643 CD28P10747 220 aa11.87□□□□□ -0.51
HDAC6-204ENST00000376643 PRKACAP17612 351 aa11.87□□□□□ -0.51
HDAC6-204ENST00000376643 PAX6P26367 422 aa11.87□□□□□ -0.51
HDAC6-204ENST00000376643 RAB13P51153 203 aa11.87□□□□□ -0.51
HDAC6-204ENST00000376643 CCR9P51686 369 aa11.87□□□□□ -0.51
HDAC6-204ENST00000376643 ISL1P61371 349 aa11.87□□□□□ -0.51
HDAC6-204ENST00000376643 BNIP1Q12981 228 aa11.87□□□□□ -0.51
HDAC6-204ENST00000376643 FDX2Q6P4F2 183 aa11.87□□□□□ -0.51
HDAC6-204ENST00000376643 CCBE1Q6UXH8 406 aaPredicted RBP11.87□□□□□ -0.51
HDAC6-204ENST00000376643 SAXO1Q8IYX7 474 aa11.87□□□□□ -0.51
HDAC6-204ENST00000376643 DYNAPQ8N1N2 210 aa11.87□□□□□ -0.51
HDAC6-204ENST00000376643 OR4X2Q8NGF9 303 aa11.87□□□□□ -0.51
HDAC6-204ENST00000376643 OR2G2Q8NGZ5 317 aa11.87□□□□□ -0.51
HDAC6-204ENST00000376643 STMN2Q93045 179 aa11.87□□□□□ -0.51
HDAC6-204ENST00000376643 MBOAT4Q96T53 435 aa11.87□□□□□ -0.51
HDAC6-204ENST00000376643 CHST6Q9GZX3 395 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms