RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 KRTAP24-1Q3LI83 254 aa13.14□□□□□ -0.31
C11orf88-202ENST00000375618 RBM48Q5RL73 367 aaKnown RBP13.14□□□□□ -0.31
C11orf88-202ENST00000375618 FAM27D1Q5T7N8 215 aa13.14□□□□□ -0.31
C11orf88-202ENST00000375618 RUSC1-AS1Q66K80 236 aa13.14□□□□□ -0.31
C11orf88-202ENST00000375618 C17orf107Q6ZR85 190 aa13.14□□□□□ -0.31
C11orf88-202ENST00000375618 PRSS48Q7RTY5 328 aa13.14□□□□□ -0.31
C11orf88-202ENST00000375618 SAXO1Q8IYX7 474 aa13.14□□□□□ -0.31
C11orf88-202ENST00000375618 NEK6Q9HC98 313 aa13.14□□□□□ -0.31
C11orf88-202ENST00000375618 K7N7A8 449 aa13.13□□□□□ -0.31
C11orf88-202ENST00000375618 GPR37O15354 613 aa13.13□□□□□ -0.31
C11orf88-202ENST00000375618 PSPNO60542 156 aa13.13□□□□□ -0.31
C11orf88-202ENST00000375618 GPX5O75715 221 aa13.13□□□□□ -0.31
C11orf88-202ENST00000375618 ALDOBP05062 364 aa13.13□□□□□ -0.31
C11orf88-202ENST00000375618 FSTP19883 344 aa13.13□□□□□ -0.31
C11orf88-202ENST00000375618 CAPZA1P52907 286 aa13.13□□□□□ -0.31
C11orf88-202ENST00000375618 ZNF146Q15072 292 aa13.13□□□□□ -0.31
C11orf88-202ENST00000375618 UNQ9370/PRO34162Q6UXP9 181 aa13.13□□□□□ -0.31
C11orf88-202ENST00000375618 BRD3OSQ6XYD6 125 aa13.13□□□□□ -0.31
C11orf88-202ENST00000375618 SATL1Q86VE3 508 aa13.13□□□□□ -0.31
C11orf88-202ENST00000375618 Q8IYB0 196 aa13.13□□□□□ -0.31
C11orf88-202ENST00000375618 TEX29Q8N6K0 151 aa13.13□□□□□ -0.31
C11orf88-202ENST00000375618 OR4M1Q8NGD0 313 aa13.13□□□□□ -0.31
C11orf88-202ENST00000375618 CCDC90BQ9GZT6 254 aa13.13□□□□□ -0.31
C11orf88-202ENST00000375618 PPIL3Q9H2H8 161 aaKnown RBP13.13□□□□□ -0.31
C11orf88-202ENST00000375618 TMEM138Q9NPI0 162 aa13.13□□□□□ -0.31
C11orf88-202ENST00000375618 ESM1Q9NQ30 184 aa13.13□□□□□ -0.31
C11orf88-202ENST00000375618 ONECUT1Q9UBC0 465 aa13.13□□□□□ -0.31
C11orf88-202ENST00000375618 CENPVL3A0A0U1RRI6 287 aa13.12□□□□□ -0.31
C11orf88-202ENST00000375618 MDFIC2A0A1B0GVS7 189 aa13.12□□□□□ -0.31
C11orf88-202ENST00000375618 MEX3AA1L020 520 aaKnown RBP13.12□□□□□ -0.31
C11orf88-202ENST00000375618 CYB5AP00167 134 aa13.12□□□□□ -0.31
C11orf88-202ENST00000375618 CHRM2P08172 466 aa13.12□□□□□ -0.31
C11orf88-202ENST00000375618 BDKRB2P30411 391 aa13.12□□□□□ -0.31
C11orf88-202ENST00000375618 TGFBR2P37173 567 aa13.12□□□□□ -0.31
C11orf88-202ENST00000375618 ZNF273Q14593 569 aa13.12□□□□□ -0.31
C11orf88-202ENST00000375618 PDCD1Q15116 288 aa13.12□□□□□ -0.31
C11orf88-202ENST00000375618 DDI2Q5TDH0 399 aa13.12□□□□□ -0.31
C11orf88-202ENST00000375618 METTL11BQ5VVY1 283 aa13.12□□□□□ -0.31
C11orf88-202ENST00000375618 TMEM200BQ69YZ2 307 aa13.12□□□□□ -0.31
C11orf88-202ENST00000375618 ASCL4Q6XD76 172 aa13.12□□□□□ -0.31
C11orf88-202ENST00000375618 TCF23Q7RTU1 214 aa13.12□□□□□ -0.31
C11orf88-202ENST00000375618 VMO1Q7Z5L0 202 aa13.12□□□□□ -0.31
C11orf88-202ENST00000375618 LYPD6Q86Y78 171 aa13.12□□□□□ -0.31
C11orf88-202ENST00000375618 PDZD9Q8IXQ8 264 aa13.12□□□□□ -0.31
C11orf88-202ENST00000375618 FAM185AQ8N0U4 392 aa13.12□□□□□ -0.31
C11orf88-202ENST00000375618 C11orf42Q8N5U0 333 aa13.12□□□□□ -0.31
C11orf88-202ENST00000375618 ASCC1Q8N9N2 400 aaKnown RBP13.12□□□□□ -0.31
C11orf88-202ENST00000375618 ZSCAN4Q8NAM6 433 aaPredicted RBP13.12□□□□□ -0.31
C11orf88-202ENST00000375618 OR4S1Q8NGB4 309 aa13.12□□□□□ -0.31
C11orf88-202ENST00000375618 OR10K1Q8NGX5 313 aa13.12□□□□□ -0.31
C11orf88-202ENST00000375618 TNFAIP8L1Q8WVP5 186 aa13.12□□□□□ -0.31
C11orf88-202ENST00000375618 TMED9Q9BVK6 235 aa13.12□□□□□ -0.31
C11orf88-202ENST00000375618 SEBOXQ9HB31 216 aaPredicted RBP13.12□□□□□ -0.31
C11orf88-202ENST00000375618 NOX4Q9NPH5 578 aa13.12□□□□□ -0.31
C11orf88-202ENST00000375618 SIRT7Q9NRC8 400 aa13.12□□□□□ -0.31
C11orf88-202ENST00000375618 ZNF581Q9P0T4 197 aa13.12□□□□□ -0.31
C11orf88-202ENST00000375618 GSTK1Q9Y2Q3 226 aa13.12□□□□□ -0.31
C11orf88-202ENST00000375618 KPTNQ9Y664 436 aa13.12□□□□□ -0.31
C11orf88-202ENST00000375618 TCF21O43680 179 aa13.11□□□□□ -0.31
C11orf88-202ENST00000375618 SC5DO75845 299 aa13.11□□□□□ -0.31
C11orf88-202ENST00000375618 CDRT1O95170 752 aa13.11□□□□□ -0.31
C11orf88-202ENST00000375618 ERVFRD-1P60508 538 aa13.11□□□□□ -0.31
C11orf88-202ENST00000375618 RPS25P62851 125 aaKnown RBP13.11□□□□□ -0.31
C11orf88-202ENST00000375618 PPP3R1P63098 170 aa13.11□□□□□ -0.31
C11orf88-202ENST00000375618 KLRD1Q13241 179 aa13.11□□□□□ -0.31
C11orf88-202ENST00000375618 TPBGQ13641 420 aa13.11□□□□□ -0.31
C11orf88-202ENST00000375618 ACSM3Q53FZ2 586 aa13.11□□□□□ -0.31
C11orf88-202ENST00000375618 LIPKQ5VXJ0 399 aa13.11□□□□□ -0.31
C11orf88-202ENST00000375618 HCP5Q6MZN7 132 aa13.11□□□□□ -0.31
C11orf88-202ENST00000375618 Q6P435 159 aa13.11□□□□□ -0.31
C11orf88-202ENST00000375618 KIR3DL3Q8N743 410 aa13.11□□□□□ -0.31
C11orf88-202ENST00000375618 SIGLECL1Q8N7X8 197 aa13.11□□□□□ -0.31
C11orf88-202ENST00000375618 PXT1Q8NFP0 134 aa13.11□□□□□ -0.31
C11orf88-202ENST00000375618 TNFRSF14Q92956 283 aa13.11□□□□□ -0.31
C11orf88-202ENST00000375618 LHX4Q969G2 390 aa13.11□□□□□ -0.31
C11orf88-202ENST00000375618 C1orf147Q96MC9 270 aaPredicted RBP13.11□□□□□ -0.31
C11orf88-202ENST00000375618 CHST6Q9GZX3 395 aa13.11□□□□□ -0.31
C11orf88-202ENST00000375618 FAM234AQ9H0X4 552 aa13.11□□□□□ -0.31
C11orf88-202ENST00000375618 TRBV23-1A0A0A0MS06 115 aa13.1□□□□□ -0.31
C11orf88-202ENST00000375618 A0A1W2PQ09 198 aa13.1□□□□□ -0.31
C11orf88-202ENST00000375618 RNASEK-C17orf49H0YIS7 233 aa13.1□□□□□ -0.31
C11orf88-202ENST00000375618 SIRPB1O00241 398 aa13.1□□□□□ -0.31
C11orf88-202ENST00000375618 OR2H2O95918 312 aa13.1□□□□□ -0.31
C11orf88-202ENST00000375618 HSMCR30P0CW71 290 aa13.1□□□□□ -0.31
C11orf88-202ENST00000375618 CCL3L1P16619 93 aa13.1□□□□□ -0.31
C11orf88-202ENST00000375618 EEF1B2P24534 225 aaKnown RBP13.1□□□□□ -0.31
C11orf88-202ENST00000375618 ZNF93P35789 620 aaPredicted RBP13.1□□□□□ -0.31
C11orf88-202ENST00000375618 PTGFRP43088 359 aa13.1□□□□□ -0.31
C11orf88-202ENST00000375618 OR3A1P47881 315 aa13.1□□□□□ -0.31
C11orf88-202ENST00000375618 TBCEQ15813 527 aaPredicted RBP13.1□□□□□ -0.31
C11orf88-202ENST00000375618 SPIN3Q5JUX0 258 aa13.1□□□□□ -0.31
C11orf88-202ENST00000375618 C9orf139Q6ZV77 190 aa13.1□□□□□ -0.31
C11orf88-202ENST00000375618 OR8H2Q8N162 312 aa13.1□□□□□ -0.31
C11orf88-202ENST00000375618 BPIFB2Q8N4F0 458 aa13.1□□□□□ -0.31
C11orf88-202ENST00000375618 TPRX1Q8N7U7 411 aa13.1□□□□□ -0.31
C11orf88-202ENST00000375618 ZDHHC22Q8N966 263 aa13.1□□□□□ -0.31
C11orf88-202ENST00000375618 TMEM203Q969S6 136 aa13.1□□□□□ -0.31
C11orf88-202ENST00000375618 SNX22Q96L94 193 aa13.1□□□□□ -0.31
C11orf88-202ENST00000375618 GPER1Q99527 375 aa13.1□□□□□ -0.31
C11orf88-202ENST00000375618 FAM192AQ9GZU8 254 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms