RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 TRPM6Q9BX84 2022 aa9.07□□□□□ -0.96
PTCH1-204ENST00000375290 LIMS1P48059 325 aa9.07□□□□□ -0.96
PTCH1-204ENST00000375290 SLC25A26Q70HW3 274 aa9.07□□□□□ -0.96
PTCH1-204ENST00000375290 ATOH1Q92858 354 aaPredicted RBP9.07□□□□□ -0.96
PTCH1-204ENST00000375290 SEBOXQ9HB31 216 aaPredicted RBP9.07□□□□□ -0.96
PTCH1-204ENST00000375290 MBNL1Q9NR56 388 aaKnown RBP9.07□□□□□ -0.96
PTCH1-204ENST00000375290 CD207Q9UJ71 328 aa9.07□□□□□ -0.96
PTCH1-204ENST00000375290 TXNDC12O95881 172 aa9.06□□□□□ -0.96
PTCH1-204ENST00000375290 C17orf78Q8N4C9 275 aa9.06□□□□□ -0.96
PTCH1-204ENST00000375290 TMEM37Q8WXS4 190 aa9.06□□□□□ -0.96
PTCH1-204ENST00000375290 ROM1Q03395 351 aa9.06□□□□□ -0.96
PTCH1-204ENST00000375290 TRA2AQ13595 282 aaKnown RBP eCLIP9.06□□□□□ -0.96
PTCH1-204ENST00000375290 REC114Q7Z4M0 266 aa9.06□□□□□ -0.96
PTCH1-204ENST00000375290 ZNF729A6NN14 1252 aaPredicted RBP9.06□□□□□ -0.96
PTCH1-204ENST00000375290 SDCBPO00560 298 aaPredicted RBP9.06□□□□□ -0.96
PTCH1-204ENST00000375290 MELTFP08582 738 aa9.06□□□□□ -0.96
PTCH1-204ENST00000375290 FAM103A1Q9BTL3 118 aaKnown RBP9.06□□□□□ -0.96
PTCH1-204ENST00000375290 MEF2BQ02080 365 aaPredicted RBP9.06□□□□□ -0.96
PTCH1-204ENST00000375290 RIGQ13278 110 aa9.06□□□□□ -0.96
PTCH1-204ENST00000375290 PLPPR5Q32ZL2 321 aa9.06□□□□□ -0.96
PTCH1-204ENST00000375290 ZNF660Q6AZW8 331 aaPredicted RBP9.06□□□□□ -0.96
PTCH1-204ENST00000375290 OR4F17Q8NGA8 305 aa9.06□□□□□ -0.96
PTCH1-204ENST00000375290 LTBP4Q8N2S1 1624 aa9.06□□□□□ -0.96
PTCH1-204ENST00000375290 FAM209BQ5JX69 171 aa9.06□□□□□ -0.96
PTCH1-204ENST00000375290 SLC16A13Q7RTY0 426 aa9.06□□□□□ -0.96
PTCH1-204ENST00000375290 ANKRD33Q7Z3H0 272 aa9.06□□□□□ -0.96
PTCH1-204ENST00000375290 OR4S2Q8NH73 311 aa9.06□□□□□ -0.96
PTCH1-204ENST00000375290 CISD1Q9NZ45 108 aaKnown RBP9.06□□□□□ -0.96
PTCH1-204ENST00000375290 ZFP30Q9Y2G7 519 aa9.06□□□□□ -0.96
PTCH1-204ENST00000375290 YBX2Q9Y2T7 364 aaKnown RBP9.06□□□□□ -0.96
PTCH1-204ENST00000375290 PAPPA2Q9BXP8 1791 aa9.06□□□□□ -0.96
PTCH1-204ENST00000375290 ADAM20O43506 726 aa9.06□□□□□ -0.96
PTCH1-204ENST00000375290 GLRA1P23415 457 aa9.06□□□□□ -0.96
PTCH1-204ENST00000375290 IFITM3Q01628 133 aa9.06□□□□□ -0.96
PTCH1-204ENST00000375290 MYPOPQ86VE0 399 aaPredicted RBP9.06□□□□□ -0.96
PTCH1-204ENST00000375290 STARD4Q96DR4 205 aa9.06□□□□□ -0.96
PTCH1-204ENST00000375290 PVRP15151 417 aa9.06□□□□□ -0.96
PTCH1-204ENST00000375290 FDX2Q6P4F2 183 aa9.06□□□□□ -0.96
PTCH1-204ENST00000375290 SMIM17P0DL12 118 aa9.06□□□□□ -0.96
PTCH1-204ENST00000375290 OR11G2Q8NGC1 345 aa9.06□□□□□ -0.96
PTCH1-204ENST00000375290 OR6C3Q9NZP0 311 aa9.06□□□□□ -0.96
PTCH1-204ENST00000375290 KCNE5Q9UJ90 142 aa9.06□□□□□ -0.96
PTCH1-204ENST00000375290 AMDHD2Q9Y303 409 aa9.06□□□□□ -0.96
PTCH1-204ENST00000375290 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.06□□□□□ -0.96
PTCH1-204ENST00000375290 HS3ST1O14792 307 aa9.06□□□□□ -0.96
PTCH1-204ENST00000375290 TNFSF12O43508 249 aa9.06□□□□□ -0.96
PTCH1-204ENST00000375290 NECAP1Q8NC96 275 aa9.06□□□□□ -0.96
PTCH1-204ENST00000375290 BHLHE23Q8NDY6 225 aa9.06□□□□□ -0.96
PTCH1-204ENST00000375290 OR10V1Q8NGI7 309 aa9.06□□□□□ -0.96
PTCH1-204ENST00000375290 FAM216AQ8WUB2 273 aa9.06□□□□□ -0.96
PTCH1-204ENST00000375290 MRM2Q9UI43 246 aaKnown RBP9.06□□□□□ -0.96
PTCH1-204ENST00000375290 TIMM9Q9Y5J7 89 aa9.06□□□□□ -0.96
PTCH1-204ENST00000375290 OR2J2O76002 312 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 TMEM215Q68D42 235 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 WDR74Q6RFH5 385 aaPredicted RBP9.05□□□□□ -0.96
PTCH1-204ENST00000375290 GLCCI1Q86VQ1 547 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 ZNF383Q8NA42 475 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 OR5R1Q8NH85 324 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 MS4A4AQ96JQ5 239 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 OR1A1Q9P1Q5 309 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 SIRPB1O00241 398 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 ZNF250P15622 560 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 B4GALNT1Q00973 533 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 CD300CQ08708 224 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 ZIC1Q15915 447 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 BPIFA4PQ86YQ2 179 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 PSMG3Q9BT73 122 aaPredicted RBP9.05□□□□□ -0.96
PTCH1-204ENST00000375290 PECRQ9BY49 303 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 CNTD2Q9H8S5 307 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 ZFP64Q9NPA5 681 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 M0R2Z0 102 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 SP1P08047 785 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 ZNF718Q3SXZ3 478 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 SPNS2Q8IVW8 549 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 SARAFQ96BY9 339 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 LIPGQ9Y5X9 500 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 ZC3H12DA2A288 527 aaKnown RBP9.05□□□□□ -0.96
PTCH1-204ENST00000375290 CSRP3P50461 194 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 SLC37A1P57057 533 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 TMEM91Q6ZNR0 172 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 CES1P1Q9UKY3 287 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 MVDP53602 400 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 NHLH1Q02575 133 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 DHRS11Q6UWP2 260 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 TGIF2LYQ8IUE0 185 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 OR2T6Q8NHC8 308 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 C1QTNF6Q9BXI9 259 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 GAL3ST2Q9H3Q3 398 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 TUBD1Q9UJT1 453 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 A0A1B0GV72 72 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 ZNF253O75346 499 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 OPRM1P35372 400 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 OR2B11Q5JQS5 317 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 CBLN2Q8IUK8 224 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 TRBV5-5A0A0J9YX44 114 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 POM121BA6NF01 834 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 CD74P04233 296 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 HOXD4P09016 255 aaPredicted RBP9.05□□□□□ -0.96
PTCH1-204ENST00000375290 OR2V1Q8NHB1 315 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 MCHR2Q969V1 340 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms