RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 GNG13Q9P2W3 67 aa17.98■□□□□ 0.47
TMEFF1-201ENST00000374879 IGSF23A1L1A6 192 aa17.98■□□□□ 0.47
TMEFF1-201ENST00000374879 TUBG1P23258 451 aa17.98■□□□□ 0.47
TMEFF1-201ENST00000374879 DUSP1P28562 367 aa17.98■□□□□ 0.47
TMEFF1-201ENST00000374879 BLVRBP30043 206 aaPredicted RBP17.98■□□□□ 0.47
TMEFF1-201ENST00000374879 PARM1Q6UWI2 310 aa17.98■□□□□ 0.47
TMEFF1-201ENST00000374879 CPEB2Q7Z5Q1 589 aaKnown RBP17.98■□□□□ 0.47
TMEFF1-201ENST00000374879 NECAP1Q8NC96 275 aa17.98■□□□□ 0.47
TMEFF1-201ENST00000374879 FAM131CQ96AQ9 280 aa17.98■□□□□ 0.47
TMEFF1-201ENST00000374879 LAMP3Q9UQV4 416 aa17.98■□□□□ 0.47
TMEFF1-201ENST00000374879 OR2C3Q8N628 320 aa17.97■□□□□ 0.47
TMEFF1-201ENST00000374879 TOMM40LQ969M1 308 aa17.97■□□□□ 0.47
TMEFF1-201ENST00000374879 GPER1Q99527 375 aa17.97■□□□□ 0.47
TMEFF1-201ENST00000374879 ZFYVE21Q9BQ24 234 aa17.97■□□□□ 0.47
TMEFF1-201ENST00000374879 PECRQ9BY49 303 aa17.97■□□□□ 0.47
TMEFF1-201ENST00000374879 FKBP11Q9NYL4 201 aa17.97■□□□□ 0.47
TMEFF1-201ENST00000374879 TNFSF14O43557 240 aa17.97■□□□□ 0.47
TMEFF1-201ENST00000374879 HLA-DOBP13765 273 aa17.97■□□□□ 0.47
TMEFF1-201ENST00000374879 GZMHP20718 246 aa17.97■□□□□ 0.47
TMEFF1-201ENST00000374879 NTSR1P30989 418 aa17.97■□□□□ 0.47
TMEFF1-201ENST00000374879 GNMTQ14749 295 aa17.97■□□□□ 0.47
TMEFF1-201ENST00000374879 SGCBQ16585 318 aa17.97■□□□□ 0.47
TMEFF1-201ENST00000374879 TMEM37Q8WXS4 190 aa17.97■□□□□ 0.47
TMEFF1-201ENST00000374879 COL4A2P08572 1712 aa17.96■□□□□ 0.47
TMEFF1-201ENST00000374879 CHD3Q12873 2000 aaKnown RBP17.96■□□□□ 0.47
TMEFF1-201ENST00000374879 TCF21O43680 179 aa17.96■□□□□ 0.47
TMEFF1-201ENST00000374879 BRS3P32247 399 aa17.96■□□□□ 0.47
TMEFF1-201ENST00000374879 SSPNQ14714 243 aa17.96■□□□□ 0.47
TMEFF1-201ENST00000374879 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.96■□□□□ 0.47
TMEFF1-201ENST00000374879 OGFOD3Q6PK18 319 aa17.96■□□□□ 0.47
TMEFF1-201ENST00000374879 OR5D18Q8NGL1 313 aa17.96■□□□□ 0.47
TMEFF1-201ENST00000374879 OR10G4Q8NGN3 311 aa17.96■□□□□ 0.47
TMEFF1-201ENST00000374879 C18orf12Q96KH6 178 aa17.96■□□□□ 0.47
TMEFF1-201ENST00000374879 NAA60Q9H7X0 242 aa17.96■□□□□ 0.47
TMEFF1-201ENST00000374879 TRAV36DV7A0A075B6V5 113 aa17.96■□□□□ 0.47
TMEFF1-201ENST00000374879 COL9A1P20849 921 aa17.96■□□□□ 0.47
TMEFF1-201ENST00000374879 ECI1P42126 302 aa17.96■□□□□ 0.47
TMEFF1-201ENST00000374879 ERVS71-1P61550 626 aa17.96■□□□□ 0.47
TMEFF1-201ENST00000374879 GNB2P62879 340 aa17.96■□□□□ 0.47
TMEFF1-201ENST00000374879 PRSS8Q16651 343 aa17.96■□□□□ 0.47
TMEFF1-201ENST00000374879 NUP54Q7Z3B4 507 aa17.96■□□□□ 0.47
TMEFF1-201ENST00000374879 CMTM1Q8IZ96 169 aa17.96■□□□□ 0.47
TMEFF1-201ENST00000374879 ACY3Q96HD9 319 aa17.96■□□□□ 0.47
TMEFF1-201ENST00000374879 RTN4RQ9BZR6 473 aa17.96■□□□□ 0.47
TMEFF1-201ENST00000374879 PCNX3Q9H6A9 2034 aa17.95■□□□□ 0.46
TMEFF1-201ENST00000374879 F5P12259 2224 aa17.95■□□□□ 0.46
TMEFF1-201ENST00000374879 IGKV1D-43A0A0B4J1Z2 117 aa17.95■□□□□ 0.46
TMEFF1-201ENST00000374879 PFN1P07737 140 aaKnown RBP17.95■□□□□ 0.46
TMEFF1-201ENST00000374879 CLEC12BQ2HXU8 276 aa17.95■□□□□ 0.46
TMEFF1-201ENST00000374879 C1QL2Q7Z5L3 287 aa17.95■□□□□ 0.46
TMEFF1-201ENST00000374879 MAML2Q8IZL2 1156 aaPredicted RBP17.95■□□□□ 0.46
TMEFF1-201ENST00000374879 FAM89BQ8N5H3 189 aa17.95■□□□□ 0.46
TMEFF1-201ENST00000374879 NEK7Q8TDX7 302 aa17.95■□□□□ 0.46
TMEFF1-201ENST00000374879 RNF133Q8WVZ7 376 aa17.95■□□□□ 0.46
TMEFF1-201ENST00000374879 RTN4IP1Q8WWV3 396 aaPredicted RBP17.95■□□□□ 0.46
TMEFF1-201ENST00000374879 TSLPQ969D9 159 aa17.95■□□□□ 0.46
TMEFF1-201ENST00000374879 HDHD3Q9BSH5 251 aaPredicted RBP17.95■□□□□ 0.46
TMEFF1-201ENST00000374879 OR10A5Q9H207 317 aa17.95■□□□□ 0.46
TMEFF1-201ENST00000374879 P4HTMQ9NXG6 502 aa17.95■□□□□ 0.46
TMEFF1-201ENST00000374879 MCTS1Q9ULC4 181 aaKnown RBP17.95■□□□□ 0.46
TMEFF1-201ENST00000374879 B3GALT1Q9Y5Z6 326 aa17.95■□□□□ 0.46
TMEFF1-201ENST00000374879 ZFP92A6NM28 416 aa17.95■□□□□ 0.46
TMEFF1-201ENST00000374879 SCDO00767 359 aa17.95■□□□□ 0.46
TMEFF1-201ENST00000374879 HSPA12AO43301 675 aa17.95■□□□□ 0.46
TMEFF1-201ENST00000374879 ONECUT2O95948 504 aa17.95■□□□□ 0.46
TMEFF1-201ENST00000374879 CCKARP32238 428 aa17.95■□□□□ 0.46
TMEFF1-201ENST00000374879 GALNSP34059 522 aa17.95■□□□□ 0.46
TMEFF1-201ENST00000374879 TNFRSF4P43489 277 aa17.95■□□□□ 0.46
TMEFF1-201ENST00000374879 VAMP2P63027 116 aa17.95■□□□□ 0.46
TMEFF1-201ENST00000374879 MPV17LQ2QL34 196 aa17.95■□□□□ 0.46
TMEFF1-201ENST00000374879 DEGS2Q6QHC5 323 aa17.95■□□□□ 0.46
TMEFF1-201ENST00000374879 COMMD2Q86X83 199 aa17.95■□□□□ 0.46
TMEFF1-201ENST00000374879 LRFN1Q9P244 771 aa17.95■□□□□ 0.46
TMEFF1-201ENST00000374879 PHF3Q92576 2039 aaKnown RBP17.95■□□□□ 0.46
TMEFF1-201ENST00000374879 ARHGEF17Q96PE2 2063 aaPredicted RBP17.94■□□□□ 0.46
TMEFF1-201ENST00000374879 PITX3O75364 302 aa17.94■□□□□ 0.46
TMEFF1-201ENST00000374879 HOXB2P14652 356 aa17.94■□□□□ 0.46
TMEFF1-201ENST00000374879 GPR3P46089 330 aa17.94■□□□□ 0.46
TMEFF1-201ENST00000374879 TLE4Q04727 773 aa17.94■□□□□ 0.46
TMEFF1-201ENST00000374879 KLHL24Q6TFL4 600 aa17.94■□□□□ 0.46
TMEFF1-201ENST00000374879 WDFY1Q8IWB7 410 aa17.94■□□□□ 0.46
TMEFF1-201ENST00000374879 A0A1W2PQF6 199 aa17.94■□□□□ 0.46
TMEFF1-201ENST00000374879 A6NCN8 305 aa17.94■□□□□ 0.46
TMEFF1-201ENST00000374879 FOXI3A8MTJ6 420 aaPredicted RBP17.94■□□□□ 0.46
TMEFF1-201ENST00000374879 SIAH2O43255 324 aa17.94■□□□□ 0.46
TMEFF1-201ENST00000374879 HPRT1P00492 218 aa17.94■□□□□ 0.46
TMEFF1-201ENST00000374879 CTHP32929 405 aa17.94■□□□□ 0.46
TMEFF1-201ENST00000374879 WNT5AP41221 380 aa17.94■□□□□ 0.46
TMEFF1-201ENST00000374879 PHLDA2Q53GA4 152 aa17.94■□□□□ 0.46
TMEFF1-201ENST00000374879 SAPCD1Q5SSQ6 148 aa17.94■□□□□ 0.46
TMEFF1-201ENST00000374879 LIAT1Q6ZQX7 453 aa17.94■□□□□ 0.46
TMEFF1-201ENST00000374879 PATE1Q8WXA2 126 aa17.94■□□□□ 0.46
TMEFF1-201ENST00000374879 SLAMF6Q96DU3 332 aa17.94■□□□□ 0.46
TMEFF1-201ENST00000374879 BMFQ96LC9 184 aa17.94■□□□□ 0.46
TMEFF1-201ENST00000374879 PYGO2Q9BRQ0 406 aa17.94■□□□□ 0.46
TMEFF1-201ENST00000374879 CTDSP1Q9GZU7 261 aa17.94■□□□□ 0.46
TMEFF1-201ENST00000374879 LANCL2Q9NS86 450 aa17.94■□□□□ 0.46
TMEFF1-201ENST00000374879 B4E171 279 aa17.93■□□□□ 0.46
TMEFF1-201ENST00000374879 CTSBP07858 339 aa17.93■□□□□ 0.46
TMEFF1-201ENST00000374879 OR5I1Q13606 314 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms