RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 OR1A1Q9P1Q5 309 aa11.29□□□□□ -0.6
GPC4-201ENST00000370828 KCNK7Q9Y2U2 307 aa11.29□□□□□ -0.6
GPC4-201ENST00000370828 CTLA4P16410 223 aa11.29□□□□□ -0.6
GPC4-201ENST00000370828 SLC37A2Q8TED4 501 aa11.29□□□□□ -0.6
GPC4-201ENST00000370828 LINC00615Q96LM1 132 aaPredicted RBP11.29□□□□□ -0.6
GPC4-201ENST00000370828 SPSB2Q99619 263 aa11.29□□□□□ -0.6
GPC4-201ENST00000370828 KLK13Q9UKR3 277 aa11.29□□□□□ -0.6
GPC4-201ENST00000370828 SLC17A4Q9Y2C5 497 aa11.29□□□□□ -0.6
GPC4-201ENST00000370828 PRRT4C9JH25 899 aa11.28□□□□□ -0.6
GPC4-201ENST00000370828 BMPR1BO00238 502 aa11.28□□□□□ -0.6
GPC4-201ENST00000370828 MPPED1O15442 326 aa11.28□□□□□ -0.6
GPC4-201ENST00000370828 PGA3P0DJD8 388 aa11.28□□□□□ -0.6
GPC4-201ENST00000370828 HES1Q14469 280 aa11.28□□□□□ -0.6
GPC4-201ENST00000370828 IP6K3Q96PC2 410 aa11.28□□□□□ -0.6
GPC4-201ENST00000370828 SIGMAR1Q99720 223 aa11.28□□□□□ -0.6
GPC4-201ENST00000370828 CHODLQ9H9P2 273 aa11.28□□□□□ -0.6
GPC4-201ENST00000370828 TBX21Q9UL17 535 aa11.28□□□□□ -0.6
GPC4-201ENST00000370828 LOC102723971A0A1B0GUV8 181 aa11.28□□□□□ -0.6
GPC4-201ENST00000370828 A0A1W2PN81 502 aa11.28□□□□□ -0.6
GPC4-201ENST00000370828 CCL5P13501 91 aa11.28□□□□□ -0.6
GPC4-201ENST00000370828 ST6GAL1P15907 406 aa11.28□□□□□ -0.6
GPC4-201ENST00000370828 GDF1P27539 372 aa11.28□□□□□ -0.6
GPC4-201ENST00000370828 LIMS1P48059 325 aa11.28□□□□□ -0.6
GPC4-201ENST00000370828 CDC20BQ86Y33 519 aa11.28□□□□□ -0.6
GPC4-201ENST00000370828 DMRTA2Q96SC8 542 aa11.28□□□□□ -0.6
GPC4-201ENST00000370828 FLRT3Q9NZU0 649 aa11.28□□□□□ -0.6
GPC4-201ENST00000370828 TCFL5Q9UL49 500 aa11.28□□□□□ -0.6
GPC4-201ENST00000370828 C3orf85A0A1B0GTC6 90 aa11.28□□□□□ -0.6
GPC4-201ENST00000370828 NPIPB8E9PQR5 432 aa11.28□□□□□ -0.6
GPC4-201ENST00000370828 H3BMH7 237 aa11.28□□□□□ -0.6
GPC4-201ENST00000370828 NKX2-2O95096 273 aa11.28□□□□□ -0.6
GPC4-201ENST00000370828 HINT1P49773 126 aaPredicted RBP11.28□□□□□ -0.6
GPC4-201ENST00000370828 SUCLG1P53597 346 aaKnown RBP11.28□□□□□ -0.6
GPC4-201ENST00000370828 DRAM2Q6UX65 266 aa11.28□□□□□ -0.6
GPC4-201ENST00000370828 OR5AU1Q8NGC0 362 aa11.28□□□□□ -0.6
GPC4-201ENST00000370828 UBALD1Q8TB05 177 aa11.28□□□□□ -0.6
GPC4-201ENST00000370828 AURKAIP1Q9NWT8 199 aaPredicted RBP11.28□□□□□ -0.6
GPC4-201ENST00000370828 H0YL77 283 aa11.28□□□□□ -0.6
GPC4-201ENST00000370828 CD160O95971 181 aa11.28□□□□□ -0.6
GPC4-201ENST00000370828 P2RY1P47900 373 aa11.28□□□□□ -0.6
GPC4-201ENST00000370828 PLGLAQ15195 96 aa11.28□□□□□ -0.6
GPC4-201ENST00000370828 LINC01555Q8NAE3 123 aa11.28□□□□□ -0.6
GPC4-201ENST00000370828 RLN3Q8WXF3 142 aa11.28□□□□□ -0.6
GPC4-201ENST00000370828 PGLYRP3Q96LB9 341 aa11.28□□□□□ -0.6
GPC4-201ENST00000370828 FAM206AQ9NX38 181 aa11.28□□□□□ -0.6
GPC4-201ENST00000370828 MMACHCQ9Y4U1 282 aa11.28□□□□□ -0.6
GPC4-201ENST00000370828 RHBDL1O75783 438 aa11.27□□□□□ -0.6
GPC4-201ENST00000370828 ATP6V0CP27449 155 aa11.27□□□□□ -0.6
GPC4-201ENST00000370828 AESQ08117 197 aa11.27□□□□□ -0.6
GPC4-201ENST00000370828 EDDM3AQ14507 147 aa11.27□□□□□ -0.6
GPC4-201ENST00000370828 R3HDM4Q96D70 268 aa11.27□□□□□ -0.6
GPC4-201ENST00000370828 F5P12259 2224 aa11.27□□□□□ -0.6
GPC4-201ENST00000370828 FABP2P12104 132 aa11.27□□□□□ -0.61
GPC4-201ENST00000370828 RRADP55042 308 aa11.27□□□□□ -0.61
GPC4-201ENST00000370828 EDDM3BP56851 147 aa11.27□□□□□ -0.61
GPC4-201ENST00000370828 FAM78AQ5JUQ0 283 aa11.27□□□□□ -0.61
GPC4-201ENST00000370828 LHFPL2Q6ZUX7 228 aa11.27□□□□□ -0.61
GPC4-201ENST00000370828 LYZL2Q7Z4W2 148 aa11.27□□□□□ -0.61
GPC4-201ENST00000370828 TUSC5Q8IXB3 177 aa11.27□□□□□ -0.61
GPC4-201ENST00000370828 LTBP4Q8N2S1 1624 aa11.27□□□□□ -0.61
GPC4-201ENST00000370828 IRF2P14316 349 aa11.27□□□□□ -0.61
GPC4-201ENST00000370828 EWSR1Q01844 656 aaKnown RBP eCLIP11.27□□□□□ -0.61
GPC4-201ENST00000370828 SLC38A11Q08AI6 406 aa11.27□□□□□ -0.61
GPC4-201ENST00000370828 ELOBQ15370 118 aa11.27□□□□□ -0.61
GPC4-201ENST00000370828 SHBQ15464 509 aa11.27□□□□□ -0.61
GPC4-201ENST00000370828 TMEM164Q5U3C3 297 aa11.27□□□□□ -0.61
GPC4-201ENST00000370828 FAM169BQ8N8A8 192 aa11.27□□□□□ -0.61
GPC4-201ENST00000370828 NEIL1Q96FI4 390 aaPredicted RBP11.27□□□□□ -0.61
GPC4-201ENST00000370828 OR2J1Q9GZK6 312 aa11.27□□□□□ -0.61
GPC4-201ENST00000370828 OR51B4Q9Y5P0 310 aa11.27□□□□□ -0.61
GPC4-201ENST00000370828 ALPK2Q86TB3 2170 aa11.27□□□□□ -0.61
GPC4-201ENST00000370828 CCDC88CQ9P219 2028 aa11.27□□□□□ -0.61
GPC4-201ENST00000370828 OR2M5A3KFT3 312 aa11.27□□□□□ -0.61
GPC4-201ENST00000370828 ZNF253O75346 499 aa11.27□□□□□ -0.61
GPC4-201ENST00000370828 EPPINO95925 133 aa11.27□□□□□ -0.61
GPC4-201ENST00000370828 GYPAP02724 150 aa11.27□□□□□ -0.61
GPC4-201ENST00000370828 CTSDP07339 412 aaPredicted RBP11.27□□□□□ -0.61
GPC4-201ENST00000370828 HIST1H1BP16401 226 aaKnown RBP11.27□□□□□ -0.61
GPC4-201ENST00000370828 NPY1RP25929 384 aa11.27□□□□□ -0.61
GPC4-201ENST00000370828 PPOXP50336 477 aa11.27□□□□□ -0.61
GPC4-201ENST00000370828 PNLIPRP2P54317 469 aa11.27□□□□□ -0.61
GPC4-201ENST00000370828 DMWDQ09019 674 aa11.27□□□□□ -0.61
GPC4-201ENST00000370828 MYPOPQ86VE0 399 aaPredicted RBP11.27□□□□□ -0.61
GPC4-201ENST00000370828 BAHD1Q8TBE0 780 aaPredicted RBP11.27□□□□□ -0.61
GPC4-201ENST00000370828 TINAGQ9UJW2 476 aa11.27□□□□□ -0.61
GPC4-201ENST00000370828 ZDHHC8Q9ULC8 765 aa11.27□□□□□ -0.61
GPC4-201ENST00000370828 PTRH2Q9Y3E5 179 aaKnown RBP11.27□□□□□ -0.61
GPC4-201ENST00000370828 FBLL1A6NHQ2 334 aaKnown RBP11.26□□□□□ -0.61
GPC4-201ENST00000370828 SIRPB1O00241 398 aa11.26□□□□□ -0.61
GPC4-201ENST00000370828 KRASP01116 189 aa11.26□□□□□ -0.61
GPC4-201ENST00000370828 ZGLP1P0C6A0 271 aa11.26□□□□□ -0.61
GPC4-201ENST00000370828 EN2P19622 333 aaPredicted RBP11.26□□□□□ -0.61
GPC4-201ENST00000370828 Q6ZNB5 142 aa11.26□□□□□ -0.61
GPC4-201ENST00000370828 MRPL37Q9BZE1 423 aaKnown RBP11.26□□□□□ -0.61
GPC4-201ENST00000370828 MCTS1Q9ULC4 181 aaKnown RBP11.26□□□□□ -0.61
GPC4-201ENST00000370828 RER1O15258 196 aa11.26□□□□□ -0.61
GPC4-201ENST00000370828 ZNF816Q0VGE8 651 aaPredicted RBP11.26□□□□□ -0.61
GPC4-201ENST00000370828 HERPUD1Q15011 391 aa11.26□□□□□ -0.61
GPC4-201ENST00000370828 C2orf68Q2NKX9 166 aa11.26□□□□□ -0.61
GPC4-201ENST00000370828 C19orf48Q6RUI8 117 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms